Literature DB >> 33053355

4EHP and GIGYF1/2 Mediate Translation-Coupled Messenger RNA Decay.

Ramona Weber1, Min-Yi Chung1, Csilla Keskeny1, Ulrike Zinnall2, Markus Landthaler2, Eugene Valkov1, Elisa Izaurralde1, Cátia Igreja3.   

Abstract

Current models of mRNA turnover indicate that cytoplasmic degradation is coupled with translation. However, our understanding of the molecular events that coordinate ribosome transit with the mRNA decay machinery is still limited. Here, we show that 4EHP-GIGYF1/2 complexes trigger co-translational mRNA decay. Human cells lacking these proteins accumulate mRNAs with prominent ribosome pausing. They include, among others, transcripts encoding secretory and membrane-bound proteins or tubulin subunits. In addition, 4EHP-GIGYF1/2 complexes fail to reduce mRNA levels in the absence of ribosome stalling or upon disruption of their interaction with the cap structure, DDX6, and ZNF598. We further find that co-translational binding of GIGYF1/2 to the mRNA marks transcripts with perturbed elongation to decay. Our studies reveal how a repressor complex linked to neurological disorders minimizes the protein output of a subset of mRNAs.
Copyright © 2020 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  DDX6; GYF domain; endoplasmic reticulum; mRNA decay; nascent chain; ribosome pausing; signal peptide; translation; tubulin

Mesh:

Substances:

Year:  2020        PMID: 33053355      PMCID: PMC8984682          DOI: 10.1016/j.celrep.2020.108262

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  101 in total

Review 1.  Take the (RN)A-train: localization of mRNA to the endoplasmic reticulum.

Authors:  Orit Hermesh; Ralf-Peter Jansen
Journal:  Biochim Biophys Acta       Date:  2013-01-23

2.  Post-transcriptional gene silencing activity of human GIGYF2.

Authors:  Marie-Hélène Kryszke; Badia Adjeriou; Feifei Liang; Hong Chen; François Dautry
Journal:  Biochem Biophys Res Commun       Date:  2016-05-05       Impact factor: 3.575

3.  The DEAD-Box Protein Dhh1p Couples mRNA Decay and Translation by Monitoring Codon Optimality.

Authors:  Aditya Radhakrishnan; Ying-Hsin Chen; Sophie Martin; Najwa Alhusaini; Rachel Green; Jeff Coller
Journal:  Cell       Date:  2016-09-15       Impact factor: 41.582

4.  Inefficient SRP interaction with a nascent chain triggers a mRNA quality control pathway.

Authors:  Andrey L Karamyshev; Anna E Patrick; Zemfira N Karamysheva; Dustin S Griesemer; Henry Hudson; Sandra Tjon-Kon-Sang; IngMarie Nilsson; Hendrik Otto; Qinghua Liu; Sabine Rospert; Gunnar von Heijne; Arthur E Johnson; Philip J Thomas
Journal:  Cell       Date:  2014-01-16       Impact factor: 41.582

5.  Widespread Co-translational RNA Decay Reveals Ribosome Dynamics.

Authors:  Vicent Pelechano; Wu Wei; Lars M Steinmetz
Journal:  Cell       Date:  2015-06-04       Impact factor: 41.582

6.  QuasR: quantification and annotation of short reads in R.

Authors:  Dimos Gaidatzis; Anita Lerch; Florian Hahne; Michael B Stadler
Journal:  Bioinformatics       Date:  2014-11-21       Impact factor: 6.937

7.  CHOPCHOP v3: expanding the CRISPR web toolbox beyond genome editing.

Authors:  Kornel Labun; Tessa G Montague; Maximilian Krause; Yamila N Torres Cleuren; Håkon Tjeldnes; Eivind Valen
Journal:  Nucleic Acids Res       Date:  2019-07-02       Impact factor: 16.971

8.  Co-translational mRNA decay in Saccharomyces cerevisiae.

Authors:  Wenqian Hu; Thomas J Sweet; Sangpen Chamnongpol; Kristian E Baker; Jeff Coller
Journal:  Nature       Date:  2009-08-23       Impact factor: 49.962

9.  Recruitment of the 4EHP-GYF2 cap-binding complex to tetraproline motifs of tristetraprolin promotes repression and degradation of mRNAs with AU-rich elements.

Authors:  Rui Fu; Myanna T Olsen; Kristofor Webb; Eric J Bennett; Jens Lykke-Andersen
Journal:  RNA       Date:  2016-01-13       Impact factor: 4.942

10.  ZNF598 Is a Quality Control Sensor of Collided Ribosomes.

Authors:  Szymon Juszkiewicz; Viswanathan Chandrasekaran; Zhewang Lin; Sebastian Kraatz; V Ramakrishnan; Ramanujan S Hegde
Journal:  Mol Cell       Date:  2018-10-04       Impact factor: 17.970

View more
  12 in total

1.  Distinct elongation stalls during translation are linked with distinct pathways for mRNA degradation.

Authors:  Anthony J Veltri; Karole N D'Orazio; Laura N Lessen; Raphael Loll-Krippleber; Grant W Brown; Rachel Green
Journal:  Elife       Date:  2022-07-27       Impact factor: 8.713

Review 2.  Ribosome states signal RNA quality control.

Authors:  Karole N D'Orazio; Rachel Green
Journal:  Mol Cell       Date:  2021-03-12       Impact factor: 17.970

3.  Ribosome slowdown triggers codon-mediated mRNA decay independently of ribosome quality control.

Authors:  Yuichiro Mishima; Peixun Han; Kota Ishibashi; Seisuke Kimura; Shintaro Iwasaki
Journal:  EMBO J       Date:  2022-01-18       Impact factor: 11.598

Review 4.  Detecting and Rescuing Stalled Ribosomes.

Authors:  Matthew C J Yip; Sichen Shao
Journal:  Trends Biochem Sci       Date:  2021-05-06       Impact factor: 14.264

5.  The EIF4E1-4EIP cap-binding complex of Trypanosoma brucei interacts with the terminal uridylyl transferase TUT3.

Authors:  Franziska Falk; Kevin Kamanyi Marucha; Christine Clayton
Journal:  PLoS One       Date:  2021-11-22       Impact factor: 3.240

6.  Gene-level analysis of rare variants in 379,066 whole exome sequences identifies an association of GIGYF1 loss of function with type 2 diabetes.

Authors:  Aimee M Deaton; Margaret M Parker; Lucas D Ward; Alexander O Flynn-Carroll; Lucas BonDurant; Gregory Hinkle; Parsa Akbari; Luca A Lotta; Aris Baras; Paul Nioi
Journal:  Sci Rep       Date:  2021-11-03       Impact factor: 4.379

7.  ZNF598 co-translationally titrates poly(GR) protein implicated in the pathogenesis of C9ORF72-associated ALS/FTD.

Authors:  Jumin Park; Jongbo Lee; Ji-Hyung Kim; Jongbin Lee; Heeju Park; Chunghun Lim
Journal:  Nucleic Acids Res       Date:  2021-11-08       Impact factor: 16.971

Review 8.  The trinity of ribosome-associated quality control and stress signaling for proteostasis and neuronal physiology.

Authors:  Jumin Park; Jongmin Park; Jongbin Lee; Chunghun Lim
Journal:  BMB Rep       Date:  2021-09       Impact factor: 4.778

9.  GIGYF1 loss of function is associated with clonal mosaicism and adverse metabolic health.

Authors:  Yajie Zhao; Stasa Stankovic; Mine Koprulu; Eleanor Wheeler; Felix R Day; Hana Lango Allen; Nicola D Kerrison; Maik Pietzner; Po-Ru Loh; Nicholas J Wareham; Claudia Langenberg; Ken K Ong; John R B Perry
Journal:  Nat Commun       Date:  2021-07-07       Impact factor: 14.919

Review 10.  Ribosome dynamics and mRNA turnover, a complex relationship under constant cellular scrutiny.

Authors:  Christelle Morris; David Cluet; Emiliano P Ricci
Journal:  Wiley Interdiscip Rev RNA       Date:  2021-05-05       Impact factor: 9.957

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.