Literature DB >> 33713598

Ribosome states signal RNA quality control.

Karole N D'Orazio1, Rachel Green2.   

Abstract

Eukaryotic cells integrate multiple quality control (QC) responses during protein synthesis in the cytoplasm. These QC responses are signaled by slow or stalled elongating ribosomes. Depending on the nature of the delay, the signal may lead to translational repression, messenger RNA decay, ribosome rescue, and/or nascent protein degradation. Here, we discuss how the structure and composition of an elongating ribosome in a troubled state determine the downstream quality control pathway(s) that ensue. We highlight the intersecting pathways involved in RNA decay and the crosstalk that occurs between RNA decay and ribosome rescue.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 33713598      PMCID: PMC8041214          DOI: 10.1016/j.molcel.2021.02.022

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  101 in total

Review 1.  The ribosome in action: Tuning of translational efficiency and protein folding.

Authors:  Marina V Rodnina
Journal:  Protein Sci       Date:  2016-06-08       Impact factor: 6.725

2.  The DEAD-Box Protein Dhh1p Couples mRNA Decay and Translation by Monitoring Codon Optimality.

Authors:  Aditya Radhakrishnan; Ying-Hsin Chen; Sophie Martin; Najwa Alhusaini; Rachel Green; Jeff Coller
Journal:  Cell       Date:  2016-09-15       Impact factor: 41.582

3.  3' poly(A) is dispensable for translation.

Authors:  A M Searfoss; R B Wickner
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-01       Impact factor: 11.205

Review 4.  The intimate relationships of mRNA decay and translation.

Authors:  Bijoyita Roy; Allan Jacobson
Journal:  Trends Genet       Date:  2013-09-30       Impact factor: 11.639

5.  Widespread Co-translational RNA Decay Reveals Ribosome Dynamics.

Authors:  Vicent Pelechano; Wu Wei; Lars M Steinmetz
Journal:  Cell       Date:  2015-06-04       Impact factor: 41.582

6.  RNA function. Ribosome stalling induced by mutation of a CNS-specific tRNA causes neurodegeneration.

Authors:  Ryuta Ishimura; Gabor Nagy; Ivan Dotu; Huihao Zhou; Xiang-Lei Yang; Paul Schimmel; Satoru Senju; Yasuharu Nishimura; Jeffrey H Chuang; Susan L Ackerman
Journal:  Science       Date:  2014-07-25       Impact factor: 47.728

7.  Genome-wide determination of RNA stability reveals hundreds of short-lived noncoding transcripts in mammals.

Authors:  Hidenori Tani; Rena Mizutani; Kazi Abdus Salam; Keiko Tano; Kenichi Ijiri; Ai Wakamatsu; Takao Isogai; Yutaka Suzuki; Nobuyoshi Akimitsu
Journal:  Genome Res       Date:  2012-02-27       Impact factor: 9.043

8.  Translation of poly(A) tails leads to precise mRNA cleavage.

Authors:  Nicholas R Guydosh; Rachel Green
Journal:  RNA       Date:  2017-02-13       Impact factor: 4.942

9.  Oxidation and alkylation stresses activate ribosome-quality control.

Authors:  Liewei L Yan; Carrie L Simms; Fionn McLoughlin; Richard D Vierstra; Hani S Zaher
Journal:  Nat Commun       Date:  2019-12-09       Impact factor: 14.919

10.  Dynamic pathways of -1 translational frameshifting.

Authors:  Jin Chen; Alexey Petrov; Magnus Johansson; Albert Tsai; Seán E O'Leary; Joseph D Puglisi
Journal:  Nature       Date:  2014-06-11       Impact factor: 49.962

View more
  18 in total

1.  iRQC, a surveillance pathway for 40S ribosomal quality control during mRNA translation initiation.

Authors:  Danielle M Garshott; Heeseon An; Elayanambi Sundaramoorthy; Marilyn Leonard; Alison Vicary; J Wade Harper; Eric J Bennett
Journal:  Cell Rep       Date:  2021-08-31       Impact factor: 9.423

2.  Distinct elongation stalls during translation are linked with distinct pathways for mRNA degradation.

Authors:  Anthony J Veltri; Karole N D'Orazio; Laura N Lessen; Raphael Loll-Krippleber; Grant W Brown; Rachel Green
Journal:  Elife       Date:  2022-07-27       Impact factor: 8.713

3.  Large protein complex interfaces have evolved to promote cotranslational assembly.

Authors:  Mihaly Badonyi; Joseph A Marsh
Journal:  Elife       Date:  2022-07-28       Impact factor: 8.713

4.  Structured elements drive extensive circular RNA translation.

Authors:  Chun-Kan Chen; Ran Cheng; Janos Demeter; Jin Chen; Shira Weingarten-Gabbay; Lihua Jiang; Michael P Snyder; Jonathan S Weissman; Eran Segal; Peter K Jackson; Howard Y Chang
Journal:  Mol Cell       Date:  2021-08-25       Impact factor: 19.328

5.  Prevention of ribosome collision-induced neuromuscular degeneration by SARS CoV-2-encoded Nsp1.

Authors:  Xingjun Wang; Suman Rimal; Ishaq Tantray; Ji Geng; Sunil Bhurtel; Tejinder Pal Khaket; Wen Li; Zhe Han; Bingwei Lu
Journal:  Proc Natl Acad Sci U S A       Date:  2022-09-28       Impact factor: 12.779

6.  RACK1 Regulates Poxvirus Protein Synthesis Independently of Its Role in Ribosome-Based Stress Signaling.

Authors:  Chorong Park; Derek Walsh
Journal:  J Virol       Date:  2022-09-13       Impact factor: 6.549

7.  Bacterial ribosome collision sensing by a MutS DNA repair ATPase paralogue.

Authors:  Federico Cerullo; Sebastian Filbeck; Pratik Rajendra Patil; Hao-Chih Hung; Haifei Xu; Julia Vornberger; Florian W Hofer; Jaro Schmitt; Guenter Kramer; Bernd Bukau; Kay Hofmann; Stefan Pfeffer; Claudio A P Joazeiro
Journal:  Nature       Date:  2022-03-09       Impact factor: 69.504

8.  Rebirth of the translational machinery: The importance of recycling ribosomes.

Authors:  David J Young; Nicholas R Guydosh
Journal:  Bioessays       Date:  2022-02-11       Impact factor: 4.653

9.  Conserved heterodimeric GTPase Rbg1/Tma46 promotes efficient translation in eukaryotic cells.

Authors:  Fuxing Zeng; Xin Li; Melissa Pires-Alves; Xin Chen; Christopher W Hawk; Hong Jin
Journal:  Cell Rep       Date:  2021-10-26       Impact factor: 9.995

Review 10.  Canary in a coal mine: collided ribosomes as sensors of cellular conditions.

Authors:  Kyusik Q Kim; Hani S Zaher
Journal:  Trends Biochem Sci       Date:  2021-10-02       Impact factor: 14.264

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.