Literature DB >> 33014683

Current breeding and genomic approaches to enhance the cane and sugar productivity under abiotic stress conditions.

Mintu Ram Meena1, Ravinder Kumar1, Appunu Chinnaswamy2, Ramaiyan Karuppaiyan2, Neeraj Kulshreshtha1, Bakshi Ram2.   

Abstract

Sugarcane (Saccharum spp.) crop is vulnerable to many abiotic stresses such as drought, salinity, waterlogging, cold and high temperature due to climate change. Over the past few decades new breeding and genomic approaches have been used to enhance the genotypic performance under abiotic stress conditions. In sugarcane, introgression of genes from wild species and allied genera for abiotic stress tolerance traits plays a significant role in the development of several stress-tolerant varieties. Moreover, the genomics and transcriptomics approaches have helped to elucidate the key genes/TFs and pathways involved in abiotic stress tolerance in sugarcane. Several novel miRNAs families /proteins or regulatory elements that are responsible for drought, salinity, and cold tolerance have been identified through high-throughput sequencing. The existing sugarcane monoploid genome sequence information opens new gateways and opportunities for researchers to improve the desired traits through efficient genome editing tools, such as the clustered regularly interspaced short palindromic repeat-Cas (CRISPR/Cas) system. TALEN mediated mutations in a highly conserved region of the caffeic acid O-methyltransferase (COMT) of sugarcane significantly reduces the lignin content in the cell wall which is amenable for biofuel production from lignocellulosic biomass. In this review, we focus on current breeding with genomic approaches and their substantial role in enhancing cane production under the abiotic stress conditions, which is expected to provide new insights to plant breeders and biotechnologists to modify their strategy in developing stress-tolerant sugarcane varieties, which can highlight the future demand of cane, bio-energy, and viability of sugar industries. © King Abdulaziz City for Science and Technology 2020.

Entities:  

Keywords:  Abiotic stresses; Genomic strategies; Sugarcane; microRNA and genome editing

Year:  2020        PMID: 33014683      PMCID: PMC7501393          DOI: 10.1007/s13205-020-02416-w

Source DB:  PubMed          Journal:  3 Biotech        ISSN: 2190-5738            Impact factor:   2.893


  55 in total

1.  RNA expression profiles and data mining of sugarcane response to low temperature.

Authors:  Fábio T S Nogueira; Vicente E De Rosa; Marcelo Menossi; Eugênio C Ulian; Paulo Arruda
Journal:  Plant Physiol       Date:  2003-08       Impact factor: 8.340

2.  Sugarcane for water-limited environments. Variation in stomatal conductance and its genetic correlation with crop productivity.

Authors:  J Basnayake; P A Jackson; N G Inman-Bamber; P Lakshmanan
Journal:  J Exp Bot       Date:  2015-05-06       Impact factor: 6.992

3.  Genetic improvement of sugarcane for drought and salinity stress tolerance using Arabidopsis vacuolar pyrophosphatase (AVP1) gene.

Authors:  Tanweer Kumar; Muhammad Ramzan Khan; Zaheer Abbas; Ghulam Muhammad Ali
Journal:  Mol Biotechnol       Date:  2014-03       Impact factor: 2.695

4.  De novo transcriptome assembly of sugarcane leaves submitted to prolonged water-deficit stress.

Authors:  A A Belesini; F M S Carvalho; B R Telles; G M de Castro; P F Giachetto; J S Vantini; S D Carlin; J O Cazetta; D G Pinheiro; M I T Ferro
Journal:  Genet Mol Res       Date:  2017-05-25

5.  Possible involvement of some secondary metabolites in salt tolerance of sugarcane.

Authors:  Abdul Wahid; Alia Ghazanfar
Journal:  J Plant Physiol       Date:  2005-09-12       Impact factor: 3.549

6.  De novo sequencing and transcriptome analysis of a low temperature tolerant Saccharum spontaneum clone IND 00-1037.

Authors:  S Dharshini; M Chakravarthi; Ashwin Narayan J; V M Manoj; M Naveenarani; Ravinder Kumar; Minturam Meena; Bakshi Ram; C Appunu
Journal:  J Biotechnol       Date:  2016-06-03       Impact factor: 3.307

7.  Characterization of miRNAs in response to short-term waterlogging in three inbred lines of Zea mays.

Authors:  Zhijie Liu; Sunita Kumari; Lifang Zhang; Yonglian Zheng; Doreen Ware
Journal:  PLoS One       Date:  2012-06-29       Impact factor: 3.240

8.  Elucidation of the molecular responses to waterlogging in Sesbania cannabina roots by transcriptome profiling.

Authors:  Cheng-Gang Ren; Cun-Cui Kong; Kun Yan; Hua Zhang; Yong-Ming Luo; Zhi-Hong Xie
Journal:  Sci Rep       Date:  2017-08-23       Impact factor: 4.379

9.  De novo assembly and transcriptome analysis of contrasting sugarcane varieties.

Authors:  Claudio Benicio Cardoso-Silva; Estela Araujo Costa; Melina Cristina Mancini; Thiago Willian Almeida Balsalobre; Lucas Eduardo Costa Canesin; Luciana Rossini Pinto; Monalisa Sampaio Carneiro; Antonio Augusto Franco Garcia; Anete Pereira de Souza; Renato Vicentini
Journal:  PLoS One       Date:  2014-02-11       Impact factor: 3.240

10.  Adaptive physiological and biochemical response of sugarcane genotypes to high-temperature stress.

Authors:  S Kohila; R Gomathi
Journal:  Indian J Plant Physiol       Date:  2018-04-12
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  2 in total

Review 1.  Recent Advances in Sugarcane Genomics, Physiology, and Phenomics for Superior Agronomic Traits.

Authors:  Mintu Ram Meena; Chinnaswamy Appunu; R Arun Kumar; R Manimekalai; S Vasantha; Gopalareddy Krishnappa; Ravinder Kumar; S K Pandey; G Hemaprabha
Journal:  Front Genet       Date:  2022-08-03       Impact factor: 4.772

Review 2.  Integrated Approach in Genomic Selection to Accelerate Genetic Gain in Sugarcane.

Authors:  Karansher Singh Sandhu; Aalok Shiv; Gurleen Kaur; Mintu Ram Meena; Arun Kumar Raja; Krishnapriya Vengavasi; Ashutosh Kumar Mall; Sanjeev Kumar; Praveen Kumar Singh; Jyotsnendra Singh; Govind Hemaprabha; Ashwini Dutt Pathak; Gopalareddy Krishnappa; Sanjeev Kumar
Journal:  Plants (Basel)       Date:  2022-08-17
  2 in total

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