Literature DB >> 33004437

Mutation of an atypical oxirane oxyanion hole improves regioselectivity of the α/β-fold epoxide hydrolase Alp1U.

Liping Zhang1, Bidhan Chandra De2, Wenjun Zhang3, Attila Mándi4, Zhuangjie Fang2, Chunfang Yang1, Yiguang Zhu5, Tibor Kurtán4, Changsheng Zhang6.   

Abstract

Epoxide hydrolases (EHs) have been characterized and engineered as biocatalysts that convert epoxides to valuable chiral vicinal diol precursors of drugs and bioactive compounds. Nonetheless, the regioselectivity control of the epoxide ring opening by EHs remains challenging. Alp1U is an α/β-fold EH that exhibits poor regioselectivity in the epoxide hydrolysis of fluostatin C (compound 1) and produces a pair of stereoisomers. Herein, we established the absolute configuration of the two stereoisomeric products and determined the crystal structure of Alp1U. A Trp-186/Trp-187/Tyr-247 oxirane oxygen hole was identified in Alp1U that replaced the canonical Tyr/Tyr pair in α/β-EHs. Mutation of residues in the atypical oxirane oxygen hole of Alp1U improved the regioselectivity for epoxide hydrolysis on 1. The single site Y247F mutation led to highly regioselective (98%) attack at C-3 of 1, whereas the double mutation W187F/Y247F resulted in regioselective (94%) nucleophilic attack at C-2. Furthermore, single-crystal X-ray structures of the two regioselective Alp1U variants in complex with 1 were determined. These findings allowed insights into the reaction details of Alp1U and provided a new approach for engineering regioselective epoxide hydrolases.
© 2020 Zhang et al.

Entities:  

Keywords:  Alp1U; enzyme catalysis; enzyme structure; mutagenesis; natural product biosynthesis; oxirane oxygen hole; regioselectivity; stereoselectivity; α/β-fold epoxide hydrolase

Mesh:

Substances:

Year:  2020        PMID: 33004437      PMCID: PMC7863881          DOI: 10.1074/jbc.RA120.015563

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  35 in total

1.  Pseudomonas aeruginosa Cif defines a distinct class of α/β epoxide hydrolases utilizing a His/Tyr ring-opening pair.

Authors:  Christopher D Bahl; Dean R Madden
Journal:  Protein Pept Lett       Date:  2012-02       Impact factor: 1.890

2.  Biochemical evidence for the involvement of tyrosine in epoxide activation during the catalytic cycle of epoxide hydrolase.

Authors:  T Yamada; C Morisseau; J E Maxwell; M A Argiriadi; D W Christianson; B D Hammock
Journal:  J Biol Chem       Date:  2000-07-28       Impact factor: 5.157

3.  Structural and Computational Insight into the Catalytic Mechanism of Limonene Epoxide Hydrolase Mutants in Stereoselective Transformations.

Authors:  Zhoutong Sun; Lian Wu; Marco Bocola; H C Stephen Chan; Richard Lonsdale; Xu-Dong Kong; Shuguang Yuan; Jiahai Zhou; Manfred T Reetz
Journal:  J Am Chem Soc       Date:  2017-12-27       Impact factor: 15.419

4.  Fluostatins C-E, novel members of the fluostatin family produced by Streptomyces strain Acta 1383.

Authors:  Stefanie Baur; Jörg Niehaus; Amalia D Karagouni; Efstathios A Katsifas; Kalliopi Chalkou; Christos Meintanis; Amanda L Jones; Michael Goodfellow; Alan C Ward; Winfried Beil; Kathrin Schneider; Roderich D Süssmuth; Hans-Peter Fiedler
Journal:  J Antibiot (Tokyo)       Date:  2006-05       Impact factor: 2.649

5.  Obtaining optical purity for product diols in enzyme-catalyzed epoxide hydrolysis: contributions from changes in both enantio- and regioselectivity.

Authors:  Åsa Janfalk Carlsson; Paul Bauer; Huan Ma; Mikael Widersten
Journal:  Biochemistry       Date:  2012-09-12       Impact factor: 3.162

Review 6.  Molecular engineering of epoxide hydrolase and its application to asymmetric and enantioconvergent hydrolysis.

Authors:  Eun Yeol Lee; Michael L Shuler
Journal:  Biotechnol Bioeng       Date:  2007-10-01       Impact factor: 4.530

7.  The x-ray structure of epoxide hydrolase from Agrobacterium radiobacter AD1. An enzyme to detoxify harmful epoxides.

Authors:  M Nardini; I S Ridder; H J Rozeboom; K H Kalk; R Rink; D B Janssen; B W Dijkstra
Journal:  J Biol Chem       Date:  1999-05-21       Impact factor: 5.157

8.  An α/β-hydrolase fold protein in the biosynthesis of thiostrepton exhibits a dual activity for endopeptidyl hydrolysis and epoxide ring opening/macrocyclization.

Authors:  Qingfei Zheng; Shoufeng Wang; Panpan Duan; Rijing Liao; Dandan Chen; Wen Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2016-11-23       Impact factor: 11.205

9.  Mechanism of soluble epoxide hydrolase. Formation of an alpha-hydroxy ester-enzyme intermediate through Asp-333.

Authors:  B Borhan; A D Jones; F Pinot; D F Grant; M J Kurth; B D Hammock
Journal:  J Biol Chem       Date:  1995-11-10       Impact factor: 5.157

10.  Absolute configuration of isosilybin A by X-ray crystallography of the heavy atom analogue 7-(4-Bromobenzoyl)isosilybin A.

Authors:  Arlene A Sy-Cordero; Cynthia S Day; Nicholas H Oberlies
Journal:  J Nat Prod       Date:  2012-11-01       Impact factor: 4.050

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  1 in total

1.  Flavin-enabled reductive and oxidative epoxide ring opening reactions.

Authors:  Bidhan Chandra De; Wenjun Zhang; Chunfang Yang; Attila Mándi; Chunshuai Huang; Liping Zhang; Wei Liu; Mark W Ruszczycky; Yiguang Zhu; Ming Ma; Ghader Bashiri; Tibor Kurtán; Hung-Wen Liu; Changsheng Zhang
Journal:  Nat Commun       Date:  2022-08-20       Impact factor: 17.694

  1 in total

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