Literature DB >> 10806198

Biochemical evidence for the involvement of tyrosine in epoxide activation during the catalytic cycle of epoxide hydrolase.

T Yamada1, C Morisseau, J E Maxwell, M A Argiriadi, D W Christianson, B D Hammock.   

Abstract

Epoxide hydrolases (EH) catalyze the hydrolysis of epoxides and arene oxides to their corresponding diols. The crystal structure of murine soluble EH suggests that Tyr(465) and Tyr(381) act as acid catalysts, activating the epoxide ring and facilitating the formation of a covalent intermediate between the epoxide and the enzyme. To explore the role of these two residues, mutant enzymes were produced and the mechanism of action was analyzed. Enzyme assays on a series of substrates confirm that both Tyr(465) and Tyr(381) are required for full catalytic activity. The kinetics of chalcone oxide hydrolysis show that mutation of Tyr(465) and Tyr(381) decreases the rate of binding and the formation of an intermediate, suggesting that both tyrosines polarize the epoxide moiety to facilitate ring opening. These two tyrosines are, however, not implicated in the hydrolysis of the covalent intermediate. Sequence comparisons showed that Tyr(465) is conserved in microsomal EHs. The substitution of analogous Tyr(374) with phenylalanine in the human microsomal EH dramatically decreases the rate of hydrolysis of cis-stilbene oxide. These results suggest that these tyrosines perform a significant mechanistic role in the substrate activation by EHs.

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Year:  2000        PMID: 10806198     DOI: 10.1074/jbc.M001464200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  28 in total

1.  Pseudomonas aeruginosa Cif defines a distinct class of α/β epoxide hydrolases utilizing a His/Tyr ring-opening pair.

Authors:  Christopher D Bahl; Dean R Madden
Journal:  Protein Pept Lett       Date:  2012-02       Impact factor: 1.890

2.  Structure of Rhodococcus erythropolis limonene-1,2-epoxide hydrolase reveals a novel active site.

Authors:  Michael Arand; B Martin Hallberg; Jinyu Zou; Terese Bergfors; Franz Oesch; Mariët J van der Werf; Jan A M de Bont; T Alwyn Jones; Sherry L Mowbray
Journal:  EMBO J       Date:  2003-06-02       Impact factor: 11.598

3.  Human soluble epoxide hydrolase: structural basis of inhibition by 4-(3-cyclohexylureido)-carboxylic acids.

Authors:  German A Gomez; Christophe Morisseau; Bruce D Hammock; David W Christianson
Journal:  Protein Sci       Date:  2005-12-01       Impact factor: 6.725

4.  Synthesis of (2S)-2-amino-7,8-epoxyoctanoic acid and structure of its metal-bridging complex with human arginase I.

Authors:  Tatiana Y Zakharian; Luigi Di Costanzo; David W Christianson
Journal:  Org Biomol Chem       Date:  2008-08-06       Impact factor: 3.876

5.  Expression of a novel epoxide hydrolase of Aspergillus usamii E001 in Escherichia coli and its performance in resolution of racemic styrene oxide.

Authors:  Die Hu; Cun-Duo Tang; Biao Yang; Jia-Chi Liu; Tao Yu; Chao Deng; Min-Chen Wu
Journal:  J Ind Microbiol Biotechnol       Date:  2015-03-03       Impact factor: 3.346

6.  Investigation of the binding mode of 1, 3, 4-oxadiazole derivatives as amide-based inhibitors for soluble epoxide hydrolase (sEH) by molecular docking and MM-GBSA.

Authors:  Leila Karami; Ali Akbar Saboury; Elham Rezaee; Sayyed Abbas Tabatabai
Journal:  Eur Biophys J       Date:  2016-12-07       Impact factor: 1.733

7.  Dioxygenases without requirement for cofactors: identification of amino acid residues involved in substrate binding and catalysis, and testing for rate-limiting steps in the reaction of 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase.

Authors:  Ursula Frerichs-Deeken; Susanne Fetzner
Journal:  Curr Microbiol       Date:  2005-09-20       Impact factor: 2.188

8.  The soluble epoxide hydrolase encoded by EPXH2 is a bifunctional enzyme with novel lipid phosphate phosphatase activity.

Authors:  John W Newman; Christophe Morisseau; Todd R Harris; Bruce D Hammock
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-06       Impact factor: 11.205

9.  Characterization of the 101-kilobase-pair megaplasmid pKB1, isolated from the rubber-degrading bacterium Gordonia westfalica Kb1.

Authors:  Daniel Bröker; Matthias Arenskötter; Antje Legatzki; Dietrich H Nies; Alexander Steinbüchel
Journal:  J Bacteriol       Date:  2004-01       Impact factor: 3.490

10.  Soluble epoxide hydrolase promotes astrocyte survival in retinopathy of prematurity.

Authors:  Jiong Hu; Sofia-Iris Bibli; Janina Wittig; Sven Zukunft; Jihong Lin; Hans-Peter Hammes; Rüdiger Popp; Ingrid Fleming
Journal:  J Clin Invest       Date:  2019-12-02       Impact factor: 14.808

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