Literature DB >> 32988335

Suggested guidelines for validation of real-time PCR assays in veterinary diagnostic laboratories.

Kathy Toohey-Kurth1, Monica M Reising2, Rebecca L Tallmadge3, Laura B Goodman3, Jianfa Bai4, Steven R Bolin5, Janice C Pedersen6, Mangkey A Bounpheng7, Roman M Pogranichniy4, Jane Christopher-Hennings8, Mary Lea Killian6, Donna M Mulrooney9, Roger Maes5, Shri Singh10, Beate M Crossley11.   

Abstract

This consensus document presents the suggested guidelines developed by the Laboratory Technology Committee (LTC) of the American Association of Veterinary Laboratory Diagnosticians (AAVLD) for development, validation, and modification (methods comparability) of real-time PCR (rtPCR) assays. These suggested guidelines are presented with reference to the World Organisation for Animal Health (OIE) guidelines for validation of nucleic acid detection assays used in veterinary diagnostic laboratories. Additionally, our proposed practices are compared to the guidelines from the Foods Program Regulatory Subdivision of the U.S. Food and Drug Administration (FDA) and from the American Society for Veterinary Clinical Pathology (ASVCP). The LTC suggestions are closely aligned with those from the OIE and comply with version 2021-01 of the AAVLD Requirements for an Accredited Veterinary Medical Diagnostic Laboratory, although some LTC recommendations are more stringent and extend beyond the AAVLD requirements. LTC suggested guidelines are substantially different than the guidelines recently published by the U.S. FDA for validation and modification of regulated tests used for detection of pathogens in pet food and animal-derived products, such as dairy. Veterinary diagnostic laboratories that perform assays from the FDA Bacteriological Analytical Method (BAM) manual must be aware of the different standard.

Keywords:  accreditation; methods comparability; real-time PCR; validation; verification

Mesh:

Year:  2020        PMID: 32988335      PMCID: PMC7649544          DOI: 10.1177/1040638720960829

Source DB:  PubMed          Journal:  J Vet Diagn Invest        ISSN: 1040-6387            Impact factor:   1.279


  41 in total

1.  Statistics versus statistical science in the regulatory process.

Authors:  N T Longford; J A Nelder
Journal:  Stat Med       Date:  1999 Sep 15-30       Impact factor: 2.373

2.  Linear regression analysis based on Buckley-James estimating equation.

Authors:  J S Lin; L J Wei
Journal:  Biometrics       Date:  1992-09       Impact factor: 2.571

Review 3.  Validation of laboratory-developed molecular assays for infectious diseases.

Authors:  Eileen M Burd
Journal:  Clin Microbiol Rev       Date:  2010-07       Impact factor: 26.132

4.  Detection and surveillance of viral hemorrhagic septicemia virus using real-time RT-PCR. II. Diagnostic evaluation of two protocols.

Authors:  Janet V Warg; Travis Clement; Emily R Cornwell; Angela Cruz; Rodman G Getchell; Cem Giray; Andrew E Goodwin; Geoffrey H Groocock; Mohamed Faisal; Robert Kim; Gwenn E Merry; Nicholas B D Phelps; Monica M Reising; Isaac Standish; Yan Zhang; Kathy Toohey-Kurth
Journal:  Dis Aquat Organ       Date:  2014-08-21       Impact factor: 1.802

5.  Detection and surveillance of viral hemorrhagic septicemia virus using real-time RT-PCR. I. Initial comparison of four protocols.

Authors:  Janet V Warg; Travis Clement; Emily R Cornwell; Angela Cruz; Rodman G Getchell; Cem Giray; Andrew E Goodwin; Geoffrey H Groocock; Mohamed Faisal; Robert Kim; Gwenn E Merry; Nicholas B D Phelps; Monica M Reising; Isaac Standish; Yan Zhang; Kathy Toohey-Kurth
Journal:  Dis Aquat Organ       Date:  2014-08-21       Impact factor: 1.802

6.  Bluetongue virus RNA detection by RT-qPCR in blood samples of sheep vaccinated with a commercially available inactivated BTV-8 vaccine.

Authors:  Adolf Steinrigl; Sandra Revilla-Fernández; Michaela Eichinger; Josef Koefer; Petra Winter
Journal:  Vaccine       Date:  2010-06-25       Impact factor: 3.641

7.  Development and performance evaluation of a streamlined method for nucleic acid purification, denaturation, and multiplex detection of Bluetongue virus and Epizootic hemorrhagic disease virus.

Authors:  Megan E Schroeder; Donna J Johnson; Eileen N Ostlund; Jennifer Meier; Mangkey A Bounpheng; Alfonso Clavijo
Journal:  J Vet Diagn Invest       Date:  2013-10-03       Impact factor: 1.279

8.  Validation of two real-time RT-PCR methods for foot-and-mouth disease diagnosis: RNA-extraction, matrix effect, uncertainty of measurement and precision.

Authors:  Nesya Goris; Frank Vandenbussche; Cécile Herr; Jérôme Villers; Yves Van der Stede; Kris De Clercq
Journal:  J Virol Methods       Date:  2009-05-15       Impact factor: 2.014

Review 9.  A review of RT-PCR technologies used in veterinary virology and disease control: sensitive and specific diagnosis of five livestock diseases notifiable to the World Organisation for Animal Health.

Authors:  Bernd Hoffmann; Martin Beer; Scott M Reid; Peter Mertens; Chris A L Oura; Piet A van Rijn; Marek J Slomka; Jill Banks; Ian H Brown; Dennis J Alexander; Donald P King
Journal:  Vet Microbiol       Date:  2009-05-06       Impact factor: 3.293

Review 10.  qPCR primer design revisited.

Authors:  Stephen Bustin; Jim Huggett
Journal:  Biomol Detect Quantif       Date:  2017-11-22
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  2 in total

1.  Best practices for performance of real-time PCR assays in veterinary diagnostic laboratories.

Authors:  Kathy L Toohey-Kurth; Donna M Mulrooney; Susanne Hinkley; Mary Lea Killian; Janice C Pedersen; Mangkey A Bounpheng; Roman Pogranichniy; Steve Bolin; Roger Maes; Rebecca L Tallmadge; Laura B Goodman; Beate M Crossley
Journal:  J Vet Diagn Invest       Date:  2020-09-30       Impact factor: 1.279

2.  Coinfection of cattle in Virginia with Theileria orientalis Ikeda genotype and Anaplasma marginale.

Authors:  Vanessa J Oakes; S Michelle Todd; Amanda A Carbonello; Pawel Michalak; Kevin K Lahmers
Journal:  J Vet Diagn Invest       Date:  2021-11-11       Impact factor: 1.279

  2 in total

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