Literature DB >> 32895578

Three-dimensional facial-image analysis to predict heterogeneity of the human ageing rate and the impact of lifestyle.

Xian Xia1,2,3, Xingwei Chen1,2,3, Gang Wu1, Fang Li1, Yiyang Wang1,2,3, Yang Chen1,2,3, Mingxu Chen1,2,3, Xinyu Wang1,2,4, Weiyang Chen1, Bo Xian1, Weizhong Chen1, Yaqiang Cao1, Chi Xu1, Wenxuan Gong1,2,3, Guoyu Chen1,2,3, Donghong Cai1,2,3, Wenxin Wei5, Yizhen Yan1,2,3, Kangping Liu2, Nan Qiao6, Xiaohui Zhao6, Jin Jia6, Wei Wang7, Brian K Kennedy8,9,10,11, Kang Zhang12, Carlo V Cannistraci13,14, Yong Zhou15, Jing-Dong J Han16,17.   

Abstract

Not all individuals age at the same rate. Methods such as the 'methylation clock' are invasive, rely on expensive assays of tissue samples and infer the ageing rate by training on chronological age, which is used as a reference for prediction errors. Here, we develop models based on convoluted neural networks through training on non-invasive three-dimensional (3D) facial images of approximately 5,000 Han Chinese individuals that achieve an average difference between chronological or perceived age and predicted age of ±2.8 and 2.9 yr, respectively. We further profile blood transcriptomes from 280 individuals and infer the molecular regulators mediating the impact of lifestyle on the facial-ageing rate through a causal-inference model. These relationships have been deposited and visualized in the Human Blood Gene Expression-3D Facial Image (HuB-Fi) database. Overall, we find that humans age at different rates both in the blood and in the face, but do so coherently and with heterogeneity peaking at middle age. Our study provides an example of how artificial intelligence can be leveraged to determine the perceived age of humans as a marker of biological age, while no longer relying on prediction errors of chronological age, and to estimate the heterogeneity of ageing rates within a population.

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Year:  2020        PMID: 32895578     DOI: 10.1038/s42255-020-00270-x

Source DB:  PubMed          Journal:  Nat Metab        ISSN: 2522-5812


  31 in total

1.  Gene regulation and DNA damage in the ageing human brain.

Authors:  Tao Lu; Ying Pan; Shyan-Yuan Kao; Cheng Li; Isaac Kohane; Jennifer Chan; Bruce A Yankner
Journal:  Nature       Date:  2004-06-09       Impact factor: 49.962

Review 2.  Bioimaging for quantitative phenotype analysis.

Authors:  Weiyang Chen; Xian Xia; Yi Huang; Xingwei Chen; Jing-Dong J Han
Journal:  Methods       Date:  2016-02-02       Impact factor: 3.608

3.  Three-dimensional human facial morphologies as robust aging markers.

Authors:  Weiyang Chen; Wei Qian; Gang Wu; Weizhong Chen; Bo Xian; Xingwei Chen; Yaqiang Cao; Christopher D Green; Fanghong Zhao; Kun Tang; Jing-Dong J Han
Journal:  Cell Res       Date:  2015-03-31       Impact factor: 25.617

4.  Inflammatory biomarkers are associated with total brain volume: the Framingham Heart Study.

Authors:  A L Jefferson; J M Massaro; P A Wolf; S Seshadri; R Au; R S Vasan; M G Larson; J B Meigs; J F Keaney; I Lipinska; S Kathiresan; E J Benjamin; C DeCarli
Journal:  Neurology       Date:  2007-03-27       Impact factor: 9.910

5.  Genome-wide methylation profiles reveal quantitative views of human aging rates.

Authors:  Gregory Hannum; Justin Guinney; Ling Zhao; Li Zhang; Guy Hughes; SriniVas Sadda; Brandy Klotzle; Marina Bibikova; Jian-Bing Fan; Yuan Gao; Rob Deconde; Menzies Chen; Indika Rajapakse; Stephen Friend; Trey Ideker; Kang Zhang
Journal:  Mol Cell       Date:  2012-11-21       Impact factor: 17.970

Review 6.  The hallmarks of aging.

Authors:  Carlos López-Otín; Maria A Blasco; Linda Partridge; Manuel Serrano; Guido Kroemer
Journal:  Cell       Date:  2013-06-06       Impact factor: 41.582

7.  Robust enumeration of cell subsets from tissue expression profiles.

Authors:  Aaron M Newman; Chih Long Liu; Michael R Green; Andrew J Gentles; Weiguo Feng; Yue Xu; Chuong D Hoang; Maximilian Diehn; Ash A Alizadeh
Journal:  Nat Methods       Date:  2015-03-30       Impact factor: 28.547

8.  Undulating changes in human plasma proteome profiles across the lifespan.

Authors:  Benoit Lehallier; David Gate; Nicholas Schaum; Tibor Nanasi; Song Eun Lee; Hanadie Yousef; Patricia Moran Losada; Daniela Berdnik; Andreas Keller; Joe Verghese; Sanish Sathyan; Claudio Franceschi; Sofiya Milman; Nir Barzilai; Tony Wyss-Coray
Journal:  Nat Med       Date:  2019-12-05       Impact factor: 53.440

9.  Disentangling molecular relationships with a causal inference test.

Authors:  Joshua Millstein; Bin Zhang; Jun Zhu; Eric E Schadt
Journal:  BMC Genet       Date:  2009-05-27       Impact factor: 2.797

10.  The transcriptional landscape of age in human peripheral blood.

Authors:  Marjolein J Peters; Roby Joehanes; Luke C Pilling; Claudia Schurmann; Karen N Conneely; Joseph Powell; Eva Reinmaa; George L Sutphin; Alexandra Zhernakova; Katharina Schramm; Yana A Wilson; Sayuko Kobes; Taru Tukiainen; Yolande F Ramos; Harald H H Göring; Myriam Fornage; Yongmei Liu; Sina A Gharib; Barbara E Stranger; Philip L De Jager; Abraham Aviv; Daniel Levy; Joanne M Murabito; Peter J Munson; Tianxiao Huan; Albert Hofman; André G Uitterlinden; Fernando Rivadeneira; Jeroen van Rooij; Lisette Stolk; Linda Broer; Michael M P J Verbiest; Mila Jhamai; Pascal Arp; Andres Metspalu; Liina Tserel; Lili Milani; Nilesh J Samani; Pärt Peterson; Silva Kasela; Veryan Codd; Annette Peters; Cavin K Ward-Caviness; Christian Herder; Melanie Waldenberger; Michael Roden; Paula Singmann; Sonja Zeilinger; Thomas Illig; Georg Homuth; Hans-Jörgen Grabe; Henry Völzke; Leif Steil; Thomas Kocher; Anna Murray; David Melzer; Hanieh Yaghootkar; Stefania Bandinelli; Eric K Moses; Jack W Kent; Joanne E Curran; Matthew P Johnson; Sarah Williams-Blangero; Harm-Jan Westra; Allan F McRae; Jennifer A Smith; Sharon L R Kardia; Iiris Hovatta; Markus Perola; Samuli Ripatti; Veikko Salomaa; Anjali K Henders; Nicholas G Martin; Alicia K Smith; Divya Mehta; Elisabeth B Binder; K Maria Nylocks; Elizabeth M Kennedy; Torsten Klengel; Jingzhong Ding; Astrid M Suchy-Dicey; Daniel A Enquobahrie; Jennifer Brody; Jerome I Rotter; Yii-Der I Chen; Jeanine Houwing-Duistermaat; Margreet Kloppenburg; P Eline Slagboom; Quinta Helmer; Wouter den Hollander; Shannon Bean; Towfique Raj; Noman Bakhshi; Qiao Ping Wang; Lisa J Oyston; Bruce M Psaty; Russell P Tracy; Grant W Montgomery; Stephen T Turner; John Blangero; Ingrid Meulenbelt; Kerry J Ressler; Jian Yang; Lude Franke; Johannes Kettunen; Peter M Visscher; G Gregory Neely; Ron Korstanje; Robert L Hanson; Holger Prokisch; Luigi Ferrucci; Tonu Esko; Alexander Teumer; Joyce B J van Meurs; Andrew D Johnson
Journal:  Nat Commun       Date:  2015-10-22       Impact factor: 14.919

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  5 in total

1.  LipidClock: A Lipid-Based Predictor of Biological Age.

Authors:  Maximilian Unfried; Li Fang Ng; Amaury Cazenave-Gassiot; Krishna Chaithanya Batchu; Brian K Kennedy; Markus R Wenk; Nicholas Tolwinski; Jan Gruber
Journal:  Front Aging       Date:  2022-05-27

2.  A New Method for Syndrome Classification of Non-Small-Cell Lung Cancer Based on Data of Tongue and Pulse with Machine Learning.

Authors:  Yu-Lin Shi; Jia-Yi Liu; Xiao-Juan Hu; Li-Ping Tu; Ji Cui; Jun Li; Zi-Juan Bi; Jia-Cai Li; Ling Xu; Jia-Tuo Xu
Journal:  Biomed Res Int       Date:  2021-08-11       Impact factor: 3.411

3.  Retinal photograph-based deep learning predicts biological age, and stratifies morbidity and mortality risk.

Authors:  Simon Nusinovici; Tyler Hyungtaek Rim; Marco Yu; Geunyoung Lee; Yih-Chung Tham; Ning Cheung; Crystal Chun Yuen Chong; Zhi Da Soh; Sahil Thakur; Chan Joo Lee; Charumathi Sabanayagam; Byoung Kwon Lee; Sungha Park; Sung Soo Kim; Hyeon Chang Kim; Tien-Yin Wong; Ching-Yu Cheng
Journal:  Age Ageing       Date:  2022-04-01       Impact factor: 10.668

4.  Decreased Vessel Density in Retinal Capillary Plexus and Thinner Ganglion Cell Complex Associated With Cognitive Impairment.

Authors:  Kai Yang; Lele Cui; Xueyu Chen; Chuang Yang; Jingwei Zheng; Xiaoxuan Zhu; Yunfan Xiao; Binbin Su; Chunmei Li; Keai Shi; Fan Lu; Jia Qu; Ming Li
Journal:  Front Aging Neurosci       Date:  2022-04-26       Impact factor: 5.750

Review 5.  The landscape of aging.

Authors:  Yusheng Cai; Wei Song; Jiaming Li; Ying Jing; Chuqian Liang; Liyuan Zhang; Xia Zhang; Wenhui Zhang; Beibei Liu; Yongpan An; Jingyi Li; Baixue Tang; Siyu Pei; Xueying Wu; Yuxuan Liu; Cheng-Le Zhuang; Yilin Ying; Xuefeng Dou; Yu Chen; Fu-Hui Xiao; Dingfeng Li; Ruici Yang; Ya Zhao; Yang Wang; Lihui Wang; Yujing Li; Shuai Ma; Si Wang; Xiaoyuan Song; Jie Ren; Liang Zhang; Jun Wang; Weiqi Zhang; Zhengwei Xie; Jing Qu; Jianwei Wang; Yichuan Xiao; Ye Tian; Gelin Wang; Ping Hu; Jing Ye; Yu Sun; Zhiyong Mao; Qing-Peng Kong; Qiang Liu; Weiguo Zou; Xiao-Li Tian; Zhi-Xiong Xiao; Yong Liu; Jun-Ping Liu; Moshi Song; Jing-Dong J Han; Guang-Hui Liu
Journal:  Sci China Life Sci       Date:  2022-09-02       Impact factor: 10.372

  5 in total

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