Literature DB >> 32859912

Sex differences in oncogenic mutational processes.

Constance H Li1,2,3, Stephenie D Prokopec1, Ren X Sun1,4, Fouad Yousif1, Nathaniel Schmitz1, Paul C Boutros5,6,7,8,9,10,11.   

Abstract

Sex differences have been observed in multiple facets of cancer epidemiology, treatment and biology, and in most cancers outside the sex organs. Efforts to link these clinical differences to specific molecular features have focused on somatic mutations within the coding regions of the genome. Here we report a pan-cancer analysis of sex differences in whole genomes of 1983 tumours of 28 subtypes as part of the ICGC/TCGA Pan-Cancer Analysis of Whole Genomes (PCAWG) Consortium. We both confirm the results of exome studies, and also uncover previously undescribed sex differences. These include sex-biases in coding and non-coding cancer drivers, mutation prevalence and strikingly, in mutational signatures related to underlying mutational processes. These results underline the pervasiveness of molecular sex differences and strengthen the call for increased consideration of sex in molecular cancer research.

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Year:  2020        PMID: 32859912      PMCID: PMC7455744          DOI: 10.1038/s41467-020-17359-2

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  24 in total

1.  Association of tumour site and sex with survival benefit from adjuvant chemotherapy in colorectal cancer.

Authors:  H Elsaleh; D Joseph; F Grieu; N Zeps; N Spry; B Iacopetta
Journal:  Lancet       Date:  2000-05-20       Impact factor: 79.321

2.  Fast model-based estimation of ancestry in unrelated individuals.

Authors:  David H Alexander; John Novembre; Kenneth Lange
Journal:  Genome Res       Date:  2009-07-31       Impact factor: 9.043

3.  Comprehensive Characterization of Molecular Differences in Cancer between Male and Female Patients.

Authors:  Yuan Yuan; Lingxiang Liu; Hu Chen; Yumeng Wang; Yanxun Xu; Huzhang Mao; Jun Li; Gordon B Mills; Yongqian Shu; Liang Li; Han Liang
Journal:  Cancer Cell       Date:  2016-05-09       Impact factor: 31.743

4.  The cyclic AMP pathway is a sex-specific modifier of glioma risk in type I neurofibromatosis patients.

Authors:  Nicole M Warrington; Tao Sun; Jingqin Luo; Robert C McKinstry; Patricia C Parkin; Sara Ganzhorn; Debra Spoljaric; Anne C Albers; Amanda Merkelson; Douglas R Stewart; David A Stevenson; David Viskochil; Todd E Druley; Jason T Forys; Karlyne M Reilly; Michael J Fisher; Uri Tabori; Jeffrey C Allen; Joshua D Schiffman; David H Gutmann; Joshua B Rubin
Journal:  Cancer Res       Date:  2014-11-07       Impact factor: 12.701

5.  Sex disparities in cancer incidence by period and age.

Authors:  Michael B Cook; Sanford M Dawsey; Neal D Freedman; Peter D Inskip; Sara M Wichner; Sabah M Quraishi; Susan S Devesa; Katherine A McGlynn
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2009-03-17       Impact factor: 4.254

Review 6.  TERT promoter mutations in thyroid cancer.

Authors:  Rengyun Liu; Mingzhao Xing
Journal:  Endocr Relat Cancer       Date:  2016-01-05       Impact factor: 5.678

7.  The significant survival advantage of female sex in nasopharyngeal carcinoma: a propensity-matched analysis.

Authors:  P-Y OuYang; L-N Zhang; X-W Lan; C Xie; W-W Zhang; Q-X Wang; Z Su; J Tang; F-Y Xie
Journal:  Br J Cancer       Date:  2015-03-05       Impact factor: 7.640

8.  Mutational processes molding the genomes of 21 breast cancers.

Authors:  Serena Nik-Zainal; Ludmil B Alexandrov; David C Wedge; Peter Van Loo; Christopher D Greenman; Keiran Raine; David Jones; Jonathan Hinton; John Marshall; Lucy A Stebbings; Andrew Menzies; Sancha Martin; Kenric Leung; Lina Chen; Catherine Leroy; Manasa Ramakrishna; Richard Rance; King Wai Lau; Laura J Mudie; Ignacio Varela; David J McBride; Graham R Bignell; Susanna L Cooke; Adam Shlien; John Gamble; Ian Whitmore; Mark Maddison; Patrick S Tarpey; Helen R Davies; Elli Papaemmanuil; Philip J Stephens; Stuart McLaren; Adam P Butler; Jon W Teague; Göran Jönsson; Judy E Garber; Daniel Silver; Penelope Miron; Aquila Fatima; Sandrine Boyault; Anita Langerød; Andrew Tutt; John W M Martens; Samuel A J R Aparicio; Åke Borg; Anne Vincent Salomon; Gilles Thomas; Anne-Lise Børresen-Dale; Andrea L Richardson; Michael S Neuberger; P Andrew Futreal; Peter J Campbell; Michael R Stratton
Journal:  Cell       Date:  2012-05-17       Impact factor: 41.582

9.  Signatures of mutational processes in human cancer.

Authors:  Ludmil B Alexandrov; Serena Nik-Zainal; David C Wedge; Samuel A J R Aparicio; Sam Behjati; Andrew V Biankin; Graham R Bignell; Niccolò Bolli; Ake Borg; Anne-Lise Børresen-Dale; Sandrine Boyault; Birgit Burkhardt; Adam P Butler; Carlos Caldas; Helen R Davies; Christine Desmedt; Roland Eils; Jórunn Erla Eyfjörd; John A Foekens; Mel Greaves; Fumie Hosoda; Barbara Hutter; Tomislav Ilicic; Sandrine Imbeaud; Marcin Imielinski; Marcin Imielinsk; Natalie Jäger; David T W Jones; David Jones; Stian Knappskog; Marcel Kool; Sunil R Lakhani; Carlos López-Otín; Sancha Martin; Nikhil C Munshi; Hiromi Nakamura; Paul A Northcott; Marina Pajic; Elli Papaemmanuil; Angelo Paradiso; John V Pearson; Xose S Puente; Keiran Raine; Manasa Ramakrishna; Andrea L Richardson; Julia Richter; Philip Rosenstiel; Matthias Schlesner; Ton N Schumacher; Paul N Span; Jon W Teague; Yasushi Totoki; Andrew N J Tutt; Rafael Valdés-Mas; Marit M van Buuren; Laura van 't Veer; Anne Vincent-Salomon; Nicola Waddell; Lucy R Yates; Jessica Zucman-Rossi; P Andrew Futreal; Ultan McDermott; Peter Lichter; Matthew Meyerson; Sean M Grimmond; Reiner Siebert; Elías Campo; Tatsuhiro Shibata; Stefan M Pfister; Peter J Campbell; Michael R Stratton
Journal:  Nature       Date:  2013-08-14       Impact factor: 49.962

10.  BPG: Seamless, automated and interactive visualization of scientific data.

Authors:  Christine P'ng; Jeffrey Green; Lauren C Chong; Daryl Waggott; Stephenie D Prokopec; Mehrdad Shamsi; Francis Nguyen; Denise Y F Mak; Felix Lam; Marco A Albuquerque; Ying Wu; Esther H Jung; Maud H W Starmans; Michelle A Chan-Seng-Yue; Cindy Q Yao; Bianca Liang; Emilie Lalonde; Syed Haider; Nicole A Simone; Dorota Sendorek; Kenneth C Chu; Nathalie C Moon; Natalie S Fox; Michal R Grzadkowski; Nicholas J Harding; Clement Fung; Amanda R Murdoch; Kathleen E Houlahan; Jianxin Wang; David R Garcia; Richard de Borja; Ren X Sun; Xihui Lin; Gregory M Chen; Aileen Lu; Yu-Jia Shiah; Amin Zia; Ryan Kearns; Paul C Boutros
Journal:  BMC Bioinformatics       Date:  2019-01-21       Impact factor: 3.169

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  18 in total

Review 1.  Sex disparities matter in cancer development and therapy.

Authors:  Sue Haupt; Franco Caramia; Sabra L Klein; Joshua B Rubin; Ygal Haupt
Journal:  Nat Rev Cancer       Date:  2021-04-20       Impact factor: 60.716

2.  Sexually dimorphic radiogenomic models identify distinct imaging and biological pathways that are prognostic of overall survival in glioblastoma.

Authors:  Niha Beig; Salendra Singh; Kaustav Bera; Prateek Prasanna; Gagandeep Singh; Jonathan Chen; Anas Saeed Bamashmos; Addison Barnett; Kyle Hunter; Volodymyr Statsevych; Virginia B Hill; Vinay Varadan; Anant Madabhushi; Manmeet S Ahluwalia; Pallavi Tiwari
Journal:  Neuro Oncol       Date:  2021-02-25       Impact factor: 12.300

Review 3.  Sex Differences in Cancer Genomes: Much Learned, More Unknown.

Authors:  Chenghao Zhu; Paul C Boutros
Journal:  Endocrinology       Date:  2021-11-01       Impact factor: 5.051

4.  Comprehensive analysis of spliceosome genes and their mutants across 27 cancer types in 9070 patients: clinically relevant outcomes in the context of 3P medicine.

Authors:  Zhen Ye; Aiying Bing; Shulian Zhao; Shuying Yi; Xianquan Zhan
Journal:  EPMA J       Date:  2022-05-10       Impact factor: 8.836

Review 5.  Advances in sex disparities for cancer immunotherapy: unveiling the dilemma of Yin and Yang.

Authors:  Junfu Ma; Yanxin Yao; Ye Tian; Kexin Chen; Ben Liu
Journal:  Biol Sex Differ       Date:  2022-10-22       Impact factor: 8.811

6.  Loss of Apc Cooperates with Activated Oncogenes to Induce Liver Tumor Formation in Mice.

Authors:  Yi Zhang; Binyong Liang; Xinhua Song; Haichuan Wang; Matthias Evert; Yi Zhou; Diego F Calvisi; Liling Tang; Xin Chen
Journal:  Am J Pathol       Date:  2021-02-03       Impact factor: 4.307

7.  Sex differences in biological aging with a focus on human studies.

Authors:  Sara Hägg; Juulia Jylhävä
Journal:  Elife       Date:  2021-05-13       Impact factor: 8.140

Review 8.  Mutational signatures and processes in hepatobiliary cancers.

Authors:  Ekaterina Zhuravleva; Colm J O'Rourke; Jesper B Andersen
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2022-03-10       Impact factor: 73.082

Review 9.  Cancer and Tumour Suppressor p53 Encounters at the Juncture of Sex Disparity.

Authors:  Sue Haupt; Ygal Haupt
Journal:  Front Genet       Date:  2021-02-16       Impact factor: 4.599

10.  Molecular subtype, biological sex and age shape melanoma tumour evolution.

Authors:  M Lotz; T Budden; S J Furney; A Virós
Journal:  Br J Dermatol       Date:  2020-06-08       Impact factor: 11.113

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