Literature DB >> 3285285

Evolution of E. coli tRNA(Trp).

M P Staves1, D P Bloch, J C Lacey.   

Abstract

Earlier studies (1) have shown there are direct correlations between the hydrophobicity ranking of most amino acids and their anticodonic nucleotides. However, four anticodonic assignments, i.e. those for Trp, Tyr, Ile and the XGA anticodons for Ser, did not correlate. It was our proposal that this failure to correlate was due to the fact that these assignments were made late, relative to the bulk of the assignments, in evolution through the mutation of existing tRNAs. We have shown (2) that E. coli tRNA(Ile 1) and tRNA(Ile 2) were likely derived from tRNA(Val 1) and tRNA(Lys) respectively and E. coli tRNA(Tyr) was possibly derived from E. coli 5s rRNA or a common precursor with 5s rRNA (3). The fact that quite high homologies were observed in these comparisons is consistent with the late evolution of the tRNAs in question. We now examine the evolution of E. coli tRNA(Trp) by comparing its homology with other E. coli tRNAs. The data suggest a possible evolutionary relationship with E. coli tRNA(Gly) or tRNA(Arg). The data support the idea of the late assignment of anticodons to Trp.

Entities:  

Keywords:  NASA Discipline Exobiology; NASA Discipline Number 52-20; NASA Program Exobiology; Non-NASA Center

Mesh:

Substances:

Year:  1988        PMID: 3285285     DOI: 10.1007/bf01808784

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  22 in total

1.  Natural selection versus primitive gene structure as determinant of codon usage.

Authors:  J T Wong; R Cedergren
Journal:  Eur J Biochem       Date:  1986-08-15

2.  Structural organization of complexes of transfer RNAs with aminoacyl transfer RNA synthetases.

Authors:  A Rich; P R Schimmel
Journal:  Nucleic Acids Res       Date:  1977       Impact factor: 16.971

3.  Selective formation of microparticles by homopolyribonucleotides and proteinoids rich in individual amino acids.

Authors:  J C Lacey; D P Stephens; S W Fox
Journal:  Biosystems       Date:  1979-03       Impact factor: 1.973

4.  5S rRNA and t RNA: evidence for a common evolutionary origin.

Authors:  D W Mullins; J C Lacey; R A Hearn
Journal:  Nat New Biol       Date:  1973-03-21

5.  Rationalization of some genetic anticodonic assignments.

Authors:  J C Lacey; L M Hall; D W Mullins
Journal:  Orig Life Evol Biosph       Date:  1985       Impact factor: 1.950

6.  Genetic code correlations: amino acids and their anticodon nucleotides.

Authors:  A L Weber; J C Lacey
Journal:  J Mol Evol       Date:  1978-08-02       Impact factor: 2.395

7.  Compilation of tRNA sequences.

Authors:  M Sprinzl; D H Gauss
Journal:  Nucleic Acids Res       Date:  1982-01-22       Impact factor: 16.971

8.  Sequence and organization of the human mitochondrial genome.

Authors:  S Anderson; A T Bankier; B G Barrell; M H de Bruijn; A R Coulson; J Drouin; I C Eperon; D P Nierlich; B A Roe; F Sanger; P H Schreier; A J Smith; R Staden; I G Young
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

9.  Transfer-RNA: the early adaptor.

Authors:  M Eigen; R Winkler-Oswatitsch
Journal:  Naturwissenschaften       Date:  1981-05

10.  Binding constants of phenylalanine for the four mononucleotides.

Authors:  M A Khaled; D W Mullins; J C Lacey
Journal:  J Mol Evol       Date:  1984       Impact factor: 2.395

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  3 in total

1.  Anticodon-dependent conservation of bacterial tRNA gene sequences.

Authors:  Margaret E Saks; John S Conery
Journal:  RNA       Date:  2007-03-22       Impact factor: 4.942

2.  Preferential hydrophobic interactions are responsible for a preference of D-amino acids in the aminoacylation of 5'-AMP with hydrophobic amino acids.

Authors:  J C Lacey; N S Wickramasinghe; R S Sabatini
Journal:  Experientia       Date:  1992-04-15

Review 3.  Experimental studies on the origin of the genetic code and the process of protein synthesis: a review update.

Authors:  J C Lacey; N S Wickramasinghe; G W Cook
Journal:  Orig Life Evol Biosph       Date:  1992       Impact factor: 1.950

  3 in total

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