| Literature DB >> 22662131 |
Benedikt Ley1, Ahmed M Khatib, Kamala Thriemer, Lorenz von Seidlein, Jacqueline Deen, Asish Mukhopadyay, Na-Yoon Chang, Ramadhan Hashim, Wolfgang Schmied, Clara J-L Busch, Rita Reyburn, Thomas Wierzba, John D Clemens, Harald Wilfing, Godwin Enwere, Theresa Aguado, Mohammad S Jiddawi, David Sack, Said M Ali.
Abstract
BACKGROUND: The gold standard for the diagnosis of cholera is stool culture, but this requires laboratory facilities and takes at least 24 hours. A rapid diagnostic test (RDT) that can be used by minimally trained staff at treatment centers could potentially improve the reporting and management of cholera outbreaks.Entities:
Mesh:
Substances:
Year: 2012 PMID: 22662131 PMCID: PMC3360732 DOI: 10.1371/journal.pone.0036930
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Study site.
Figure 2Flow of study participants.
Performance of the cholera rapid diagnostic test, Pemba and Unguja, Zanzibar.
| Sensitivity% (95%CI | Specificity% (95%CI | PPV% (95%CI | NPV% (95%CI | No. pos./total (%) with | |
|
| 93.1 (88.7–96.2) (189/203) | 49.2 (44.3–54.1) (206/419) | 47.0 (42.1–52.0) (189/402) | 93.6 (89.6–96.5) (206/220) | 203/622 (32.6) |
|
| 89.1 (76.4–96.4) (41/46) | 51.5 (33.5–69.2) (17/33) | 71.9 (58.5–83.0) (41/57) | 77.3 (54.6–92.2) (17/22) | 46/79 (58.2) |
|
| 94.3 (89.4–97.4) (148/157) | 49.0 (43.9–54.1) (189/386) | 42.9 (37.6–48.3) (148/345) | 95.5 (91.5–97.9) (189/198) | 157/543 (28.9) |
|
|
|
|
|
|
|
using exact method.
Stratified analysis of the performance of cholera dipstick test according to fluid management (oral rehydration or intravenous fluids) in 592 patients and recent antibiotic intake (yes or no) in 576 patients.
| Sensitivity (95%CI) | Specificity (95%CI) | PPV (95%CI) | NPV (95%CI) | No. pos./total (%) with | |
|
| |||||
|
| 93.8 (79.2–99.2) (30/32) | 53.9 (46.3–61.4) (96/178) | 26.8 (18.9–36.0) (30/112) | 98.0 (92.8–99.8) (96/98) | 32 |
|
| 92.7 (87.6–96.1) (153/165) | 42.9 (36.2–49.7) (93/217) | 55.2 (49.2–61.2) (153/277) | 88.6 (80.9–94.0) (93/105) | 165 |
|
| 0.97 | 0.19 | <0.01 | 0.62 | <0.01 |
|
| |||||
|
| 93.8 (69.7–99.8) (15/16) | 59.5 (43.3–74.4) (25/42) | 46.9 (29.1–65.3) (15/32) | 96.2 (80.4–99.9) (25/26) | 16/58 (27.6) |
|
| 92.8 (87.8–96.2) (155/167) | 49.3 (43.9–54.7) (173/351) | 46.5 (41.1–52.1) (155/333) | 93.5 (86.1–94.7) (173/190) | 167/518 (32.2) |
|
| 0.98 | 0.48 | 0.98 | 0.86 | 0.60 |
using exact method.
in 6/203 culture positive cases no rehydration treatment was provided.
Comparison of the field and laboratory performance of the cholera dipstick test.
| (n = 67) | Sensitivity% (95%CI | Specificity% (95%CI | PPV% (95%CI | NPV% (95%CI | No. (%) with |
|
| 90.0 (76.3–97.2) (36/40) | 55.6 (35.3–74.5) (15/27) | 75.0 (60.4–86.4) (36/48) | 78.9 (54.4–93.9) (15/19) | 40 (59.7) |
|
| 87.5 (73.2–95.8) (35/40) | 74.1 (53.7–88.9) (20/27) | 83.3 (68.6–93.0) (35/42) | 80.0 (59.3–93.2) (20/25) | 40 (59.7) |
|
| 0.931 | 0.510 | 0.740 | 0.977 |
using exact method.
rapid diagnostic testing was done both in the field and in the laboratory on specimens from the same stool samples.
using McNemars test.
Validation studies of the Institut Pasteur prototype and Crystal VC™ test for diagnosis of Vibrio cholerae(O1 samples only considered).
| RDT | Institut Pasteur prototype | Crystal VC™ (Span Diagnostics, India) | |||||
| Authors | Nato, et.al. | Bhuiyan, et.al. | Wang, et.al. | Kalluri, et.al. | Harris, et.al. | Mukherjee et al. | This Paper |
|
| CDLI, 2003 | JCM, 2003 | BMC Inf. Dis., 2006 | TM&IH, 2006 | TM&IH, 2009 | JJID, 2010 | This Journal |
|
| Madagascar | Bangladesh | Mozambique | Bangladesh | Guinea-Bissau | India | Zanzibar/Tanzania |
|
| Culture of frozen stool or rapid cultures of stool collected on filter paper | Culture of rectal swab in C-B media (and multiplex PCR when RDT+/culture -) | Culture of rectal swabs in C-B media and bulk stool | Culture of bulk stool | PCR of swab in C-B media | Culture of bulk stool | Culture of rectal swab in C-B media |
|
| frozen stool/rapid cultures of stool collected on filter paper | Rectal swab incubated in APW at 37°C for 4 h | Rectal swab incubated in APW at 37°C/4 h and fresh, bulk stool | Fresh, bulk stool | Fresh, bulk stool | Fresh, bulk stool | Fresh, bulk stool |
|
| ? | ? | Trained technician at field laboratory | Trained technician at ICDDR,B and trained field ‘paramedics’ | Individuals with graduate-level laboratory technical training | Post graduate investigator |
|
|
| 140 | 134 | 219 rectal swabs in APW 172 bulk stool | 304 | 101 | 212 |
|
|
| 65 (46%) | 68 (51%) | 138 (35%) | 116 (38%) | 65 (64%) | 72 (34%) |
|
|
| 98.5% | 96% | 97% rectal swabs in APW 93% bulk stool | 94% lab tech. 93% field ‘paramedics’ | 97% | 92% |
|
|
| 96% | 92% | 97% rectal swabs in APW 77% bulk stool | 76% lab tech. 67% by field ‘paramedics | 71–76%; | 73% |
|
|
| 95.6% | 93% | 94% rectal swabs in APW 74% bulk stool | 70% lab tech. 63% field ‘paramedics | 87–89% | 64% |
|
|
| 99% | 95% | ? | 95% lab tech. 94% field ‘paramedics | 92–93% | 95% |
|