Literature DB >> 32807948

Viral manipulation of functionally distinct interneurons in mice, non-human primates and humans.

Douglas Vormstein-Schneider1, Jessica D Lin1, Kenneth A Pelkey2, Ramesh Chittajallu2, Baolin Guo1, Mario A Arias-Garcia1, Kathryn Allaway1,3,4, Sofia Sakopoulos1, Gates Schneider1, Olivia Stevenson1, Josselyn Vergara1, Jitendra Sharma5, Qiangge Zhang5, Tom P Franken6, Jared Smith6, Leena A Ibrahim1,3, Kevin J Mastro1,3, Ehsan Sabri7, Shuhan Huang1,3, Emilia Favuzzi1,3, Timothy Burbridge1,3, Qing Xu8, Lihua Guo8, Ian Vogel1, Vanessa Sanchez1, Giuseppe A Saldi1,3, Bram L Gorissen1, Xiaoqing Yuan2, Kareem A Zaghloul9, Orrin Devinsky10, Bernardo L Sabatini1,3, Renata Batista-Brito7, John Reynolds6, Guoping Feng1,5, Zhanyan Fu1, Chris J McBain2, Gord Fishell1,3, Jordane Dimidschstein11.   

Abstract

Recent success in identifying gene-regulatory elements in the context of recombinant adeno-associated virus vectors has enabled cell-type-restricted gene expression. However, within the cerebral cortex these tools are largely limited to broad classes of neurons. To overcome this limitation, we developed a strategy that led to the identification of multiple new enhancers to target functionally distinct neuronal subtypes. By investigating the regulatory landscape of the disease gene Scn1a, we discovered enhancers selective for parvalbumin (PV) and vasoactive intestinal peptide-expressing interneurons. Demonstrating the functional utility of these elements, we show that the PV-specific enhancer allowed for the selective targeting and manipulation of these neurons across vertebrate species, including humans. Finally, we demonstrate that our selection method is generalizable and characterizes additional PV-specific enhancers with exquisite specificity within distinct brain regions. Altogether, these viral tools can be used for cell-type-specific circuit manipulation and hold considerable promise for use in therapeutic interventions.

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Year:  2020        PMID: 32807948      PMCID: PMC8015416          DOI: 10.1038/s41593-020-0692-9

Source DB:  PubMed          Journal:  Nat Neurosci        ISSN: 1097-6256            Impact factor:   28.771


  43 in total

Review 1.  Mapping human cell phenotypes to genotypes with single-cell genomics.

Authors:  J Gray Camp; Randall Platt; Barbara Treutlein
Journal:  Science       Date:  2019-09-27       Impact factor: 47.728

Review 2.  Viral Strategies for Targeting the Central and Peripheral Nervous Systems.

Authors:  Claire N Bedbrook; Benjamin E Deverman; Viviana Gradinaru
Journal:  Annu Rev Neurosci       Date:  2018-04-25       Impact factor: 12.449

3.  Integrative functional genomic analyses implicate specific molecular pathways and circuits in autism.

Authors:  Neelroop N Parikshak; Rui Luo; Alice Zhang; Hyejung Won; Jennifer K Lowe; Vijayendran Chandran; Steve Horvath; Daniel H Geschwind
Journal:  Cell       Date:  2013-11-21       Impact factor: 41.582

4.  Targeting neuronal and glial cell types with synthetic promoter AAVs in mice, non-human primates and humans.

Authors:  Josephine Jüttner; Arnold Szabo; Brigitte Gross-Scherf; Rei K Morikawa; Santiago B Rompani; Peter Hantz; Tamas Szikra; Federico Esposti; Cameron S Cowan; Arjun Bharioke; Claudia P Patino-Alvarez; Özkan Keles; Akos Kusnyerik; Thierry Azoulay; Dominik Hartl; Arnaud R Krebs; Dirk Schübeler; Rozina I Hajdu; Akos Lukats; Janos Nemeth; Zoltan Z Nagy; Kun-Chao Wu; Rong-Han Wu; Lue Xiang; Xiao-Long Fang; Zi-Bing Jin; David Goldblum; Pascal W Hasler; Hendrik P N Scholl; Jacek Krol; Botond Roska
Journal:  Nat Neurosci       Date:  2019-07-08       Impact factor: 24.884

5.  Transcriptomic analysis of autistic brain reveals convergent molecular pathology.

Authors:  Irina Voineagu; Xinchen Wang; Patrick Johnston; Jennifer K Lowe; Yuan Tian; Steve Horvath; Jonathan Mill; Rita M Cantor; Benjamin J Blencowe; Daniel H Geschwind
Journal:  Nature       Date:  2011-05-25       Impact factor: 49.962

6.  rAAV-compatible MiniPromoters for restricted expression in the brain and eye.

Authors:  Charles N de Leeuw; Andrea J Korecki; Garrett E Berry; Jack W Hickmott; Siu Ling Lam; Tess C Lengyell; Russell J Bonaguro; Lisa J Borretta; Vikramjit Chopra; Alice Y Chou; Cletus A D'Souza; Olga Kaspieva; Stéphanie Laprise; Simone C McInerny; Elodie Portales-Casamar; Magdalena I Swanson-Newman; Kaelan Wong; George S Yang; Michelle Zhou; Steven J M Jones; Robert A Holt; Aravind Asokan; Daniel Goldowitz; Wyeth W Wasserman; Elizabeth M Simpson
Journal:  Mol Brain       Date:  2016-05-10       Impact factor: 4.041

Review 7.  Preclinical Animal Models for Dravet Syndrome: Seizure Phenotypes, Comorbidities and Drug Screening.

Authors:  Aliesha Griffin; Kyla R Hamling; SoonGweon Hong; Mana Anvar; Luke P Lee; Scott C Baraban
Journal:  Front Pharmacol       Date:  2018-06-04       Impact factor: 5.810

8.  Genetic identification of brain cell types underlying schizophrenia.

Authors:  Nathan G Skene; Julien Bryois; Trygve E Bakken; Gerome Breen; James J Crowley; Héléna A Gaspar; Paola Giusti-Rodriguez; Rebecca D Hodge; Jeremy A Miller; Ana B Muñoz-Manchado; Michael C O'Donovan; Michael J Owen; Antonio F Pardiñas; Jesper Ryge; James T R Walters; Sten Linnarsson; Ed S Lein; Patrick F Sullivan; Jens Hjerling-Leffler
Journal:  Nat Genet       Date:  2018-05-21       Impact factor: 38.330

9.  Functional Access to Neuron Subclasses in Rodent and Primate Forebrain.

Authors:  Preeti Mehta; Lauren Kreeger; Dennis C Wylie; Jagruti J Pattadkal; Tara Lusignan; Matthew J Davis; Gergely F Turi; Wen-Ke Li; Matthew P Whitmire; Yuzhi Chen; Bridget L Kajs; Eyal Seidemann; Nicholas J Priebe; Attila Losonczy; Boris V Zemelman
Journal:  Cell Rep       Date:  2019-03-05       Impact factor: 9.423

10.  A scalable platform for the development of cell-type-specific viral drivers.

Authors:  Sinisa Hrvatin; Christopher P Tzeng; M Aurel Nagy; Hume Stroud; Charalampia Koutsioumpa; Oren F Wilcox; Elena G Assad; Jonathan Green; Christopher D Harvey; Eric C Griffith; Michael E Greenberg
Journal:  Elife       Date:  2019-09-23       Impact factor: 8.140

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  32 in total

Review 1.  Mesoscopic Imaging: Shining a Wide Light on Large-Scale Neural Dynamics.

Authors:  Jessica A Cardin; Michael C Crair; Michael J Higley
Journal:  Neuron       Date:  2020-10-14       Impact factor: 17.173

2.  AAV capsid variants with brain-wide transgene expression and decreased liver targeting after intravenous delivery in mouse and marmoset.

Authors:  David Goertsen; Nicholas C Flytzanis; Nick Goeden; Miguel R Chuapoco; Alexander Cummins; Yijing Chen; Yingying Fan; Qiangge Zhang; Jitendra Sharma; Yangyang Duan; Liping Wang; Guoping Feng; Yu Chen; Nancy Y Ip; James Pickel; Viviana Gradinaru
Journal:  Nat Neurosci       Date:  2021-12-09       Impact factor: 24.884

Review 3.  From Progenitors to Progeny: Shaping Striatal Circuit Development and Function.

Authors:  Rhys Knowles; Nathalie Dehorter; Tommas Ellender
Journal:  J Neurosci       Date:  2021-11-17       Impact factor: 6.167

Review 4.  What is a cell type and how to define it?

Authors:  Hongkui Zeng
Journal:  Cell       Date:  2022-07-21       Impact factor: 66.850

5.  Enhancer viruses for combinatorial cell-subclass-specific labeling.

Authors:  Lucas T Graybuck; Tanya L Daigle; Adriana E Sedeño-Cortés; Miranda Walker; Brian Kalmbach; Garreck H Lenz; Elyse Morin; Thuc Nghi Nguyen; Emma Garren; Jacqueline L Bendrick; Tae Kyung Kim; Thomas Zhou; Marty Mortrud; Shenqin Yao; La' Akea Siverts; Rachael Larsen; Bryan B Gore; Eric R Szelenyi; Cameron Trader; Pooja Balaram; Cindy T J van Velthoven; Megan Chiang; John K Mich; Nick Dee; Jeff Goldy; Ali H Cetin; Kimberly Smith; Sharon W Way; Luke Esposito; Zizhen Yao; Viviana Gradinaru; Susan M Sunkin; Ed Lein; Boaz P Levi; Jonathan T Ting; Hongkui Zeng; Bosiljka Tasic
Journal:  Neuron       Date:  2021-03-30       Impact factor: 17.173

6.  Alternating sources of perisomatic inhibition during behavior.

Authors:  Barna Dudok; Peter M Klein; Ernie Hwaun; Brian R Lee; Zizhen Yao; Olivia Fong; John C Bowler; Satoshi Terada; Fraser T Sparks; Gergely G Szabo; Jordan S Farrell; Jim Berg; Tanya L Daigle; Bosiljka Tasic; Jordane Dimidschstein; Gord Fishell; Attila Losonczy; Hongkui Zeng; Ivan Soltesz
Journal:  Neuron       Date:  2021-02-01       Impact factor: 17.173

7.  Functional enhancer elements drive subclass-selective expression from mouse to primate neocortex.

Authors:  John K Mich; Lucas T Graybuck; Erik E Hess; Joseph T Mahoney; Yoshiko Kojima; Yi Ding; Saroja Somasundaram; Jeremy A Miller; Brian E Kalmbach; Cristina Radaelli; Bryan B Gore; Natalie Weed; Victoria Omstead; Yemeserach Bishaw; Nadiya V Shapovalova; Refugio A Martinez; Olivia Fong; Shenqin Yao; Marty Mortrud; Peter Chong; Luke Loftus; Darren Bertagnolli; Jeff Goldy; Tamara Casper; Nick Dee; Ximena Opitz-Araya; Ali Cetin; Kimberly A Smith; Ryder P Gwinn; Charles Cobbs; Andrew L Ko; Jeffrey G Ojemann; C Dirk Keene; Daniel L Silbergeld; Susan M Sunkin; Viviana Gradinaru; Gregory D Horwitz; Hongkui Zeng; Bosiljka Tasic; Ed S Lein; Jonathan T Ting; Boaz P Levi
Journal:  Cell Rep       Date:  2021-03-30       Impact factor: 9.423

8.  Bottom-up inputs are required for establishment of top-down connectivity onto cortical layer 1 neurogliaform cells.

Authors:  Leena Ali Ibrahim; Shuhan Huang; Marian Fernandez-Otero; Mia Sherer; Yanjie Qiu; Spurti Vemuri; Qing Xu; Robert Machold; Gabrielle Pouchelon; Bernardo Rudy; Gord Fishell
Journal:  Neuron       Date:  2021-09-02       Impact factor: 18.688

Review 9.  A Role for Vasoactive Intestinal Peptide Interneurons in Neurodevelopmental Disorders.

Authors:  Kevin M Goff; Ethan M Goldberg
Journal:  Dev Neurosci       Date:  2021-04-01       Impact factor: 2.984

Review 10.  The Role of Parvalbumin Interneurons in Neurotransmitter Balance and Neurological Disease.

Authors:  Lailun Nahar; Blake M Delacroix; Hyung W Nam
Journal:  Front Psychiatry       Date:  2021-06-18       Impact factor: 4.157

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