| Literature DB >> 32788621 |
Ichiro Wakabayashi1, Ryoji Eguchi2, Yoko Sotoda3, Dirk von Lewinski4, Harald Sourij5, Takashi Daimon6, Klaus Groschner7, Peter P Rainer4.
Abstract
Mortality from ischemic heart disease (IHD) is significantly lower in Japan than in Western countries. The purpose of this study was to investigate differences in circulating microRNA (miRNA) levels related to IHD in Austrians and Japanese. Participants were middle-aged healthy male Austrians (n = 20) and Japanese (n = 20). Total miRNAs in serum from each participant were analyzed using the 3D-Gene miRNA Oligo chip. Twenty-one miRNAs, previously reported as associated with IHD, were compared between Austrians and Japanese. The expression levels of miR-106a-5p, miR-135a-3p, miR-150-3p, miR-16-5p, miR-17-5p. miR-191-5p, miR-320b, miR-451a, miR-486-5p, miR-663b, and miR-92a-3p were significantly higher, while the miR-2861 expression level was significantly lower in Austrians as compared to Japanese. Both in Austrians and Japanese, there were significant positive correlations between serum expression levels of each pair of the above miRNAs except for miR-2861. The expression level of miR-2861 showed significant positive correlations with the expression levels of miR-106a-5p, miR-150-3p, miR-17-5p, miR-486-5p, miR-663b and miR-92a-3p in Austrians but not in Japanese. In pathway analysis, proinflammatory cytokine production in foam cells and collagen synthesis in vascular smooth muscle cells were associated with differentially expressed miRNAs. Difference in miRNA levels may contribute to lower cardiovascular risk in Japan than in Western countries.Entities:
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Year: 2020 PMID: 32788621 PMCID: PMC7423897 DOI: 10.1038/s41598-020-69332-0
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Characteristics of the participants.
| Austrians | Japanese | ||
|---|---|---|---|
| Number | 20 | 20 | – |
| Age (years) | 49.9 (6.3) | 48.7 (6.4) | 0.551 |
| Height (cm) | 180.3 (5.7) | 173.2 (4.5) | 0.000 |
| Body weight (kg) | 83.7 (9.1) | 70.0 (10.6) | 0.000 |
| Body mass index (kg/m2) | 25.7 (1.9) | 23.3 (3.1) | 0.006 |
| Systolic BP (mmHg) | 123.3 (10.1) | 123.4 (11.8) | 0.977 |
| Diastolic BP (mmHg) | 80.4 (5.3) | 79.5 (11.3) | 0.736 |
| Pulse pressure (mmHg) | 42.9 (7.4) | 43.9 (8.9) | 0.686 |
| Fasting sugar (mg/dl) | 78.8 (9.8) | 97.7 (7.7) | 0.000 |
| Triglycerides (mg/dl)a | 84 (61, 135) | 94 (60, 141) | 0.882 |
| HDL cholesterol (mg/dl) | 47.3 (14.8) | 61.6 (15.8) | 0.005 |
| LDL cholesterol (mg/dl) | 145.7 (30.4) | 124.3 (34.0) | 0.042 |
Means with standard deviations of the variables except for triglycerides are shown.
BP blood pressure. Probability (p) values for differences between Austrians and Japanese are shown.
aLevels of triglycerides are shown as medians with interquartile ranges.
Ischemic heart disease-related miRNAs that showed significant differences between Austrians and Japanese.
| miRNA | Intensitya | Fold changeb | Associationc | References | |
|---|---|---|---|---|---|
| 106a-5p | 5.70 ± 0.92 5.06 ± 0.64 | 1.55 | 0.014 | Inverse | [ |
| 135a-3p | 7.48 ± 0.87 6.48 ± 0.54 | 1.99 | < 0.001 | Positive | [ |
| 150-3p | 4.75 ± 0.39 4.29 ± 0.25 | 1.65 | < 0.001 | Positive | [ |
| 16-5p | 8.04 ± 1.16 6.61 ± 0.69 | 2.69 | < 0.001 | Inverse | [ |
| 17-5p | 5.96 ± 0.90 5.24 ± 0.60 | 1.63 | 0.005 | Positive Inverse | [ [ |
| 191-5p | 5.11 ± 0.63 4.28 ± 0.54 | 1.77 | < 0.001 | Positive Inverse | [ [ |
| 2,861 | 12.63 ± 0.48 12.89 ± 0.27 | − 1.21 | 0.002 | Positive | [ |
| 320b | 5.32 ± 0.60 4.96 ± 0.31 | 1.28 | 0.004 | Inverse | [ |
| 451a | 11.13 ± 1.25 9.53 ± 0.80 | 3.03 | < 0.001 | Positive | [ |
| 486-5p | 8.65 ± 1.05 7.40 ± 0.55 | 2.38 | < 0.001 | Positive | [ |
| 663b | 8.07 ± 0.41 7.48 ± 0.30 | 1.50 | < 0.001 | Positive | [ |
| 92a-3p | 8.00 ± 0.94 7.01 ± 0.48 | 1.98 | < 0.001 | Positive Inverse | [ [ |
aMeans with standard deviations of log2-transformed intensities of each miRNA in Austrians (upper) and Japanese (lower).
bFold change in each mean miRNA intensity of Austrians versus Japanese.
cPositive or inverse association between each miRNA and ischemic heart disease reported previously.
Ischemic heart disease-related miRNAs that showed no significant differences between Austrians and Japanese.
| miRNA | Intensitya | Fold changeb | Associationc | References | |
|---|---|---|---|---|---|
| 1,254 | 5.81 ± 0.40 5.80 ± 0.24 | 1.00 | 0.431 | Positive | [ |
| 197-3p | 4.74 ± 0.38 4.67 ± 0.28 | 1.04 | 0.254 | Positive | [ |
| 221-3p | 4.95 ± 0.60 4.95 ± 0.67 | 1.00 | 0.431 | Positive | [ |
| 223-3p | 6.63 ± 0.81 6.97 ± 0.76 | − 1.27 | 0.138 | Positive | [ |
| 23a-3p | 6.02 ± 0.61 6.08 ± 0.51 | − 1.04 | 0.372 | Positive | [ |
| 26a-5p | 5.08 ± 0.83 4.99 ± 0.82 | 1.06 | 0.378 | Inverse | [ |
| 30d-5p | 5.66 ± 0.86 5.39 ± 0.46 | 1.21 | 0.111 | Positive | [ |
| 3135b | 9.05 ± 0.34 9.05 ± 0.25 | 1.00 | 0.416 | Positive | [ |
| 328-3p | 4.70 ± 0.41 4.58 ± 0.26 | 1.08 | 0.071 | Positive | [ |
aMeans with standard deviations of log2-transformed intensities of each miRNA in Austrians (upper) and Japanese (lower).
bFold change in each mean miRNA intensity of Austrians versus Japanese.
cPositive or inverse association between each miRNA and ischemic heart disease reported previously.
Correlations for each pair of microRNAs that showed significant differences between Austrians and Japanese.
| 106a-5p | 135a-3p | 150-3p | 16-5p | 17-5p | 191-5p | 2,861 | 320b | 451a | 486-5p | 663b | 92a-3p | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106a-5p | 1.000 1.000 | |||||||||||
| 135a-3p | − 0.054 0.384 | 1.000 1.000 | ||||||||||
| 150-3p | 0.266 0.382 | 0.729** 0.781** | 1.000 1.000 | |||||||||
| 16-5p | 0.879** 0.897** | 0.278 0.262 | 0.414 0.285 | 1.000 1.000 | ||||||||
| 17-5p | 0.963** 0.955** | 0.128 0.345 | 0.427 0.370 | 0.918** 0.855** | 1.000 1.000 | |||||||
| 191-5p | 0.644** 0.734** | 0.205 0.452* | 0.333 0.443 | 0.641** 0.671** | 0.627** 0.751** | 1.000 1.000 | ||||||
| 2,861 | 0.496* − 0.286 | 0.405 − 0.042 | 0.747** 0.015 | 0.406 − 0.159 | 0.571** − 0.225 | 0.301 − 0.058 | 1.000 1.000 | |||||
| 320b | 0.249 0.149 | 0.267 0.675** | 0.652** 0.453* | 0.252 − 0.105 | 0.342 0.061 | 0.378 0.122 | 0.682** − 0.324 | 1.000 1.000 | ||||
| 451a | 0.877** 0.805** | 0.260 0.241 | 0.363 0.261 | 0.989** 0.945** | 0.904** 0.762** | 0.590** 0.470* | 0.372 − 0.063 | 0.178 − 0.111 | 1.000 1.000 | |||
| 486-5p | 0.640** 0.638** | 0.592** 0.525* | 0.762** 0.459* | 0.747** 0.621** | 0.735** 0.589** | 0.531* 0.359 | 0.751** − 0.282 | 0.469* 0.360 | 0.720** 0.653** | 1.000 1.000 | ||
| 663b | 0.236 0.352 | 0.709** 0.621** | 0.918** 0.713** | 0.370 0.224 | 0.396 0.403 | 0.312 0.514* | 0.782** − 0.068 | 0.726** 0.457* | 0.321 0.148 | 0.706** 0.357 | 1.000 1.000 | |
| 92a-3p | 0.719** 0.871** | 0.572** 0.579** | 0.771** 0.582** | 0.825** 0.799** | 0.814** 0.874** | 0.640** 0.703** | 0.719** − 0.171 | 0.476* 0.300 | 0.796** 0.749** | 0.975** 0.860** | 0.708** 0.533* | 1.000 1.000 |
Upper, Pearson’s correlation coefficients in Austrians; lower, Pearson’s correlation coefficients in Japanese. Asterisks denote significant correlations (*p < 0.05; **p < 0.01).
Figure 1Correlations between each pair of miRNAs. Pearson’s correlation coefficients in Austrians, Japanese and overall participants are shown in the figures. Asterisks denote significant correlations (**p < 0.01).
Figure 2Correlations of miR-2861 with miR-106a-5p, miR-150-3p, miR-17-5p, miR-486-5p, miR-663b and miR-92a-3p. Pearson’s correlation coefficients in Austrians, Japanese and overall participants are shown in the figures. Asterisks denote significant correlations (*p < 0.05; **p < 0.01). An outlier of miR-2861 (log2[2341.8] = 11.19) was removed in the figure.
Eigenvalues of each miRNA determined by principal component analysis in Austrians and Japanese.
| miRNA | Austrians | Japanese | |||
|---|---|---|---|---|---|
| The first PC (CPVE: 61.3%) | The second PC (CPVE: 81.6%) | The first PC 1 (CPVE: 53.5%) | The second PC ‘(CPVE: 72.7%) | The third PC (CPVE: 82.7%) | |
| 106a-5p | − 0.220 | 0.012 | 0.132 | ||
| 135a-3p | − 0.218 | 0.026 | − 0.021 | ||
| 150-3p | − 0.042 | 0.081 | − 0.204 | ||
| 16-5p | − 0.043 | − 0.167 | − 0.012 | ||
| 17-5p | − 0.023 | 0.023 | 0.035 | ||
| 191-5p | 0.034 | 0.319 | − 0.224 | ||
| 2,861 | 0.154 | − 0.128 | 0.211 | − | |
| 320b | − 0.056 | − 0.335 | 0.460 | ||
| 451a | − 0.102 | − 0.192 | − 0.027 | ||
| 486-5p | 0.513 | 0.230 | 0.327 | ||
| 663b | − 0.102 | 0.050 | − 0.152 | ||
| 92a-3p | 0.502 | 0.321 | 0.066 | ||
Eigenvalues of twelve miRNAs for each principal component are shown. PC, principal component; CPVE, cumulative percentage of variance explained by principal components. The eigenvalues of major miRNAs constituting each principal component are indicated with underlines.
Figure 3Overlap of identified miRNA targets with pathways related to the pathogenesis of atherosclerosis. Highlighted are the molecules that showed significant associations in Ingenuity Pathway Analysis with the 392 miRNAs found to be significantly different between Austrians and Japanese in this study.
Correlations for each pair of microRNAs that showed no significant differences between Austrians and Japanese.
| 1,254 | 197-3p | 221-3p | 223-3p | 23a-3p | 26a-5p | 30d-5p | 3135b | 328-3p | |
|---|---|---|---|---|---|---|---|---|---|
| 1,254 | 1.000 1.000 | ||||||||
| 197-3p | 0.391 0.119 | 1.000 1.000 | |||||||
| 221-3p | − 0.359 − 0.196 | 0.292 0.088 | 1.000 1.000 | ||||||
| 223-3p | − 0.350 − 0.238 | 0.051 0.212 | 0.757** 0.252 | 1.000 1.000 | |||||
| 23a-3p | − 0.323 − 0.322 | 0.083 0.142 | 0.819** 0.767** | 0.906** 0.747** | 1.000 1.000 | ||||
| 26a-5p | − 0.278 − 0.092 | 0.000 0.013 | 0.775** 0.592** | 0.872** 0.631** | 0.863** 0.724** | 1.000 1.000 | |||
| 30d-5p | 0.361 − 0.072 | 0.741** 0.237 | 0.317 0.882** | 0.109 0.257 | 0.015 0.671** | − 0.011 0.508* | 1.000 1.000 | ||
| 3135b | 0.588** − 0.167 | 0.556** 0.153 | 0.413 0.549* | 0.246 0.645** | 0.273 0.634** | 0.283 0.663** | 0.736** 0.476* | 1.000 1.000 | |
| 328-3p | 0.637** 0.300 | 0.714** 0.391 | 0.128 − 0.168 | 0.000 − 0.062 | 0.007 − 0.238 | − 0.033 − 0.126 | 0.812** 0.142 | 0.800** 0.056 | 1.000 1.000 |
Upper, Pearson’s correlation coefficients in Austrians; lower, Pearson’s correlation coefficients in Japanese. Asterisks denote significant correlations (*p < 0.05; **p < 0.01).