| Literature DB >> 24900964 |
An Hsu1, Shu-Jen Chen2, Yu-Sun Chang3, Hua-Chien Chen2, Pao-Hsien Chu4.
Abstract
BACKGROUND: Recent studies have revealed the role of microRNAs (miRNAs) in a variety of biological and pathological processes, including acute myocardial infarction (AMI). We hypothesized that ST-segment elevation myocardial infarction (STEMI) may be associated with an alteration of miRNAs and that circulating miRNAs may be used as diagnostic markers for STEMI.Entities:
Mesh:
Substances:
Year: 2014 PMID: 24900964 PMCID: PMC4036490 DOI: 10.1155/2014/418628
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Characteristics of the patients.
| Exploration cohort | Validation cohort | |||||
|---|---|---|---|---|---|---|
| Ctrl ( | AMI ( |
| Ctrl ( | AMI ( |
| |
| Age (years) | 44.6 ± 10.3 | 53.3 ± 9.2 | 0.0980 | 53.7 ± 14.8 | 59.0 ± 11.5 | 0.1235 |
| Male/female ( | 6/2 | 8/0 | 29/2 | 29/2 | ||
| Hypertension (%) | 16 | 20 | 0.2873 | 17 | 19 | 0.323 |
| Diabetes mellitus | 12 | 14 | 0.765 | 11 | 14 | 0.635 |
| Hypercholesterolemia | 12 | 14 | 0.864 | 14 | 16 | 0.123 |
| Smoking | 14 | 14 | 0.125 | 14 | 15 | 0.110 |
| Troponin I (<0.2 ng/mL) | NA | 25.9 ± 65.3 | NA | 11.7 ± 28.2 | ||
| Triglyceride (mg/dL) | 138.9 ± 73.7 | 144.0 ± 52.9 | 0.8750 | 161.1 ± 94.1 | 154.0 ± 86.7 | 0.7685 |
| Cholesterol (mg/dL) | 187.0 ± 26.1 | 164.6 ± 30.9 | 0.1400 | 197.9 ± 41.2 | 160.9 ± 37.8 | 0.0008 |
| White blood cells (×103/uL) | 6.35 ± 1.76 | 11.19 ± 2.19 | <0.0001 | 6.48 ± 1.84 | 11.15 ± 3.99 | <0.0001 |
| Creatinine (md/dL) | 0.91 ± 0.22 | 0.95 ± 0.13 | 0.6560 | 0.96 ± 0.22 | 1.28 ± 1.20 | 0.1505 |
Ctrl: control; AMI: acute myocardial infarction; NA: not available; Troponin I was the highest value.
Figure 1Detection of differentially expressed circulating miRNAs in serum samples. (a) Detection of miRNAs in serum from healthy subjects. Expression levels of 270 miRNAs in 300 μL of serum were quantified using a multiplexed RT-qPCR assay. The relative expression levels of the top 50 miRNAs detected in serum from three healthy subjects (mean ± SD) are shown. (b) Principle component analysis using expression levels of the 270 human miRNAs in serum samples from 8 healthy (blue) and 8 AMI (red) subjects. (c) Volcano plot indicated that 25 miRNAs were significantly altered in sera from the AMI patients. Red lines indicate the Student's t-test P = 0.05 and ±2-fold change. (d) Unsupervised hierarchical clustering of healthy and AMI samples using the 25 differentially expressed serum miRNAs. The hierarchical clustering was generated using Pearson's dissimilarity as the distance measure and Ward's method for linkage analysis. A: AMI patients; N: healthy subjects.
miRNAs differentially expressed in the sera from patients with acute myocardial infarction.
| miRNA name | Chromosome location | AMI (mean ± SD) | Ctrl. (mean ± SD) | Fold-change (AMI versus Ctrl.) |
|
|---|---|---|---|---|---|
| miRNA upregulated in AMI | |||||
| miR-193a-5p | 17q12 | 13.15 ± 1.02 | 11.49 ± 0.48 | 3.17 | 0.0016 |
| miR-147b | 15q21.1 | 5.96 ± 1.47 | 4.34 ± 0.85 | 3.07 | 0.0232 |
| miR-497-5p | 17p13.1 | 9.12 ± 0.57 | 7.58 ± 0.57 | 2.91 | 0.0002 |
| miR-542-5p | Xq26.3 | 6.34 ± 1.07 | 5.09 ± 1.05 | 2.36 | 0.0431 |
| miR-885-3p | 3p25.3 | 11.05 ± 0.99 | 9.88 ± 0.42 | 2.25 | 0.0113 |
| miR-150-3p | 19q13.32 | 9.87 ± 0.66 | 8.72 ± 0.58 | 2.21 | 0.0038 |
| miR-877-5p | 6p21.33 | 13.40 ± 1.06 | 12.26 ± 0.66 | 2.20 | 0.0290 |
| miR-31-5p | 9p21.3 | 7.74 ± 0.84 | 6.63 ± 0.66 | 2.17 | 0.0145 |
| miR-760 | 1p22.1 | 13.01 ± 0.91 | 11.96 ± 0.94 | 2.07 | 0.0490 |
| miR-17-3p | 13q31.3 | 7.24 ± 0.23 | 6.21 ± 0.67 | 2.04 | 0.0017 |
| miR-486-3p | 8p11.21 | 9.19 ± 0.66 | 8.17 ± 0.54 | 2.02 | 0.0068 |
| miR-124-3p | 8p23.1, 8q12.3 | 7.23 ± 0.79 | 6.21 ± 0.90 | 2.02 | 0.0390 |
|
| |||||
| miRNA downregulated in AMI | |||||
| miR-20a-5p | 13q31.3 | 7.20 ± 1.00 | 8.79 ± 0.76 | −3.01 | 0.0045 |
| miR-18a-5p | 13q31.3 | 4.86 ± 0.83 | 6.41 ± 0.78 | −2.94 | 0.0027 |
| miR-26a-5p | 12q14.1, 3p22.2 | 7.96 ± 0.75 | 9.38 ± 0.65 | −2.69 | 0.0019 |
| miR-17-5p | 13q31.3 | 8.36 ± 0.92 | 9.76 ± 0.72 | −2.64 | 0.0066 |
| miR-106a-5p | Xq26.2 | 6.82 ± 1.15 | 8.19 ± 0.84 | −2.59 | 0.0216 |
| let-7d-5p | 9q22.32 | 8.44 ± 0.66 | 9.77 ± 0.65 | −2.52 | 0.0019 |
| miR-191-5p | 3p21.31 | 9.68 ± 0.62 | 11.01 ± 0.54 | −2.51 | 0.0008 |
| miR-26b-3p | 2q35 | 6.62 ± 1.09 | 7.91 ± 0.42 | −2.44 | 0.0107 |
| miR-126-3p | 9q34.3 | 9.15 ± 1.17 | 10.25 ± 0.44 | −2.14 | 0.0340 |
| miR-487b | 14q32.31 | 5.10 ± 0.56 | 6.16 ± 1.01 | −2.09 | 0.0278 |
| miR-127-3p | 14q32.31 | 6.25 ± 0.71 | 7.29 ± 0.93 | −2.06 | 0.0313 |
| miR-199a-3p | 1q25.1, 19p13.2 | 7.31 ± 0.60 | 8.34 ± 0.86 | −2.04 | 0.0205 |
| miR-29c-5p | 1q32.2 | 7.56 ± 0.56 | 8.57 ± 0.60 | −2.02 | 0.0052 |
Ctrl.: control; and AMI: acute myocardial infarction.
Figure 2Expression levels and predictive power of five candidate miRNAs in the healthy controls and acute myocardial infarction (AMI) patients. (a) Expression levels of 5 candidate miRNAs in serum samples from 31 healthy controls and 31 AMI patients. Ct values generated from RT-qPCR were normalized to the spiked-in synthetic miRNA and then converted to 39-Ct. Data are presented as mean ± SD. P values were calculated using the t-test. (b) ROC analysis using expression levels of individual miRNAs in healthy controls and AMI samples.
Validation of differentially expressed serum miRNAs in patients with acute myocardial infarction.
| miRNA name | AMI (mean ± SD) | Ctrl. (mean ± SD) | Fold-change (AMI versus Ctrl.) |
| ROC | ROC |
|---|---|---|---|---|---|---|
| miRNA upregulated in AMI | ||||||
| miR-486-3p | 9.79 ± 1.61 | 8.89 ± 1.66 | 1.87 | 0.0310 | 0.6285 | 0.0822 |
| miR-150-3p | 7.60 ± 1.25 | 6.88 ± 0.91 | 1.64 | 0.0128 | 0.7154 | 0.0036 |
|
| ||||||
| miRNA downregulated in AMI | ||||||
| miR-26a-5p | 7.68 ± 1.68 | 8.61 ± 0.84 | −1.90 | 0.0073 | 0.6753 | 0.0177 |
| miR-191-5p | 10.23 ± 2.07 | 11.08 ± 0.96 | −1.80 | 0.0364 | 0.6524 | 0.0392 |
| miR-126-3p | 8.45 ± 1.61 | 9.27 ± 0.89 | −1.76 | 0.0126 | 0.6941 | 0.0087 |
Ctrl.: control; AMI: acute myocardial infarction; ROC: receiver operator characteristics; and AUC: area under the curve.
Figure 3Predictive power and expression ratios between two candidate serum miRNAs in the healthy controls and acute myocardial infarction (AMI) patients. (a) ROC analysis using expression ratios between two miRNAs (control N = 31, AMI N = 31 patients). (b) Expression ratios of miRNA combinations in AMI and control samples. Data are presented as mean ± SD. P values were calculated using the t-test.
Receiver operator characteristic curve analysis of miRNA ratios in the prediction of acute myocardial infarction.
| Combined miRNAs | AMI (mean ± SD) | Ctrl. (mean ± SD) |
| ROC AUC | AUC 95% CI | ROC | Sensitivity | Specificity |
|---|---|---|---|---|---|---|---|---|
| miR-191-5p/miR-486-3p | 1.89 ± 1.78 | 4.42 ± 2.31 | 1.02 | 0.8629 | 0.7648 to 0.9610 | <0.0001 | 83.87% | 83.33% |
| miR-486-3p/miR-126-3p | 3.46 ± 2.96 | 1.06 ± 0.71 | 4.66 | 0.8491 | 0.7531 to 0.9451 | <0.0001 | 61.29% | 93.55% |
| miR-126-3p/miR-150-3p | 2.77 ± 4.04 | 6.52 ± 4.24 | 7.0 | 0.8429 | 0.7423 to 0.9434 | <0.0001 | 93.59% | 64.52% |
| miR-486-3p/miR-26a-5p | 6.00 ± 5.03 | 2.23 ± 2.88 | 0.0006 | 0.8205 | 0.7160 to 0.9250 | <0.0001 | 77.42% | 74.19% |
| miR-26a-5p/miR-150-3p | 1.50 ± 1.34 | 4.50 ± 3.41 | 2.49 | 0.8205 | 0.7166 to 0.9244 | <0.0001 | 83.87% | 70.97% |
| miR-191-5p/miR-150-3p | 10.77 ± 12.84 | 23.01 ± 16.87 | 0.0021 | 0.7888 | 0.6718 to 0.9058 | <0.0001 | 77.42% | 77.42% |
Ctrl.: control; AMI: acute myocardial infarction; ROC: receiver operator characteristics; and AUC: area under the curve.