Literature DB >> 32787262

Phosphorylation-Inducing Chimeric Small Molecules.

Sachini U Siriwardena1,2, Dhanushka N P Munkanatta Godage1,2, Veronika M Shoba1,2, Sophia Lai1,3, Mengchao Shi1,2,4, Peng Wu1,2,4, Santosh K Chaudhary1,2, Stuart L Schreiber1,3, Amit Choudhary1,2,4.   

Abstract

Small molecules have been classically developed to inhibit enzyme activity; however, new classes of small molecules that endow new functions to enzymes via proximity-mediated effect are emerging. Phosphorylation (native or neo) of any given protein-of-interest can alter its structure and function, and we hypothesized that such modifications can be accomplished by small molecules that bring a kinase in proximity to the protein-of-interest. Herein, we describe phosphorylation-inducing chimeric small molecules (PHICS), which enable two example kinases-AMPK and PKC-to phosphorylate target proteins that are not otherwise substrates for these kinases. PHICS are formed by linking small-molecule binders of the kinase and the target protein, and exhibit several features of a bifunctional molecule, including the hook-effect, turnover, isoform specificity, dose and temporal control of phosphorylation, and activity dependent on proximity (i.e., linker length). Using PHICS, we were able to induce native and neo-phosphorylations of BRD4 by AMPK or PKC. Furthermore, PHICS induced a signaling-relevant phosphorylation of the target protein Bruton's tyrosine kinase in cells. We envision that PHICS-mediated native or neo-phosphorylations will find utility in basic research and medicine.

Entities:  

Mesh:

Substances:

Year:  2020        PMID: 32787262     DOI: 10.1021/jacs.0c05537

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  14 in total

Review 1.  Advances in targeting 'undruggable' transcription factors with small molecules.

Authors:  Matthew J Henley; Angela N Koehler
Journal:  Nat Rev Drug Discov       Date:  2021-05-18       Impact factor: 84.694

2.  Synthetic Reprogramming of Kinases Expands Cellular Activities of Proteins.

Authors:  Veronika M Shoba; Dhanushka N P Munkanatta Godage; Santosh K Chaudhary; Arghya Deb; Sachini U Siriwardena; Amit Choudhary
Journal:  Angew Chem Int Ed Engl       Date:  2022-05-31       Impact factor: 16.823

3.  Protein-Protein Interaction Prediction for Targeted Protein Degradation.

Authors:  Oliver Orasch; Noah Weber; Michael Müller; Amir Amanzadi; Chiara Gasbarri; Christopher Trummer
Journal:  Int J Mol Sci       Date:  2022-06-24       Impact factor: 6.208

4.  Deubiquitinase-targeting chimeras for targeted protein stabilization.

Authors:  Nathaniel J Henning; Lydia Boike; Jessica N Spradlin; Carl C Ward; Gang Liu; Erika Zhang; Bridget P Belcher; Scott M Brittain; Matthew J Hesse; Dustin Dovala; Lynn M McGregor; Rachel Valdez Misiolek; Lindsey W Plasschaert; David J Rowlands; Feng Wang; Andreas O Frank; Daniel Fuller; Abigail R Estes; Katelyn L Randal; Anoohya Panidapu; Jeffrey M McKenna; John A Tallarico; Markus Schirle; Daniel K Nomura
Journal:  Nat Chem Biol       Date:  2022-02-24       Impact factor: 16.174

5.  Trivalent PROTACs enhance protein degradation via combined avidity and cooperativity.

Authors:  Satomi Imaide; Kristin M Riching; Nikolai Makukhin; Vesna Vetma; Claire Whitworth; Scott J Hughes; Nicole Trainor; Sarah D Mahan; Nancy Murphy; Angus D Cowan; Kwok-Ho Chan; Conner Craigon; Andrea Testa; Chiara Maniaci; Marjeta Urh; Danette L Daniels; Alessio Ciulli
Journal:  Nat Chem Biol       Date:  2021-10-21       Impact factor: 15.040

6.  Specificity Distorted: Chemical Induction of Biological Paracatalysis.

Authors:  Brian P Callahan; Daniel A Ciulla; Andrew G Wagner; Zihan Xu; Xiaoyu Zhang
Journal:  Biochemistry       Date:  2020-09-15       Impact factor: 3.162

7.  Ligandability of E3 Ligases for Targeted Protein Degradation Applications.

Authors:  Bridget P Belcher; Carl C Ward; Daniel K Nomura
Journal:  Biochemistry       Date:  2021-09-02       Impact factor: 3.162

8.  Target protein deglycosylation in living cells by a nanobody-fused split O-GlcNAcase.

Authors:  Yun Ge; Daniel H Ramirez; Bo Yang; Alexandria K D'Souza; Chanat Aonbangkhen; Stephanie Wong; Christina M Woo
Journal:  Nat Chem Biol       Date:  2021-03-08       Impact factor: 15.040

Review 9.  Major Advances in Targeted Protein Degradation: PROTACs, LYTACs, and MADTACs.

Authors:  Shanique Alabi; Craig Crews
Journal:  J Biol Chem       Date:  2021-04-08       Impact factor: 5.157

Review 10.  E3 Ligase Ligands for PROTACs: How They Were Found and How to Discover New Ones.

Authors:  Tasuku Ishida; Alessio Ciulli
Journal:  SLAS Discov       Date:  2020-11-03       Impact factor: 3.341

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.