PURPOSE: To accelerate and improve multishot diffusion-weighted MRI reconstruction using deep learning. METHODS: An unrolled pipeline containing recurrences of model-based gradient updates and neural networks was introduced for accelerating multishot DWI reconstruction with shot-to-shot phase correction. The network was trained to predict results of jointly reconstructed multidirection data using single-direction data as input. In vivo brain and breast experiments were performed for evaluation. RESULTS: The proposed method achieves a reconstruction time of 0.1 second per image, over 100-fold faster than a shot locally low-rank reconstruction. The resultant image quality is comparable to the target from the joint reconstruction with a peak signal-to-noise ratio of 35.3 dB, a normalized root-mean-square error of 0.0177, and a structural similarity index of 0.944. The proposed method also improves upon the locally low-rank reconstruction (2.9 dB higher peak signal-to-noise ratio, 29% lower normalized root-mean-square error, and 0.037 higher structural similarity index). With training data from the brain, this method also generalizes well to breast diffusion-weighted imaging, and fine-tuning further reduces aliasing artifacts. CONCLUSION: A proposed data-driven approach enables almost real-time reconstruction with improved image quality, which improves the feasibility of multishot DWI in a wide range of clinical and neuroscientific studies.
PURPOSE: To accelerate and improve multishot diffusion-weighted MRI reconstruction using deep learning. METHODS: An unrolled pipeline containing recurrences of model-based gradient updates and neural networks was introduced for accelerating multishot DWI reconstruction with shot-to-shot phase correction. The network was trained to predict results of jointly reconstructed multidirection data using single-direction data as input. In vivo brain and breast experiments were performed for evaluation. RESULTS: The proposed method achieves a reconstruction time of 0.1 second per image, over 100-fold faster than a shot locally low-rank reconstruction. The resultant image quality is comparable to the target from the joint reconstruction with a peak signal-to-noise ratio of 35.3 dB, a normalized root-mean-square error of 0.0177, and a structural similarity index of 0.944. The proposed method also improves upon the locally low-rank reconstruction (2.9 dB higher peak signal-to-noise ratio, 29% lower normalized root-mean-square error, and 0.037 higher structural similarity index). With training data from the brain, this method also generalizes well to breast diffusion-weighted imaging, and fine-tuning further reduces aliasing artifacts. CONCLUSION: A proposed data-driven approach enables almost real-time reconstruction with improved image quality, which improves the feasibility of multishot DWI in a wide range of clinical and neuroscientific studies.
Authors: Susie Y Huang; Qiyuan Tian; Qiuyun Fan; Thomas Witzel; Barbara Wichtmann; Jennifer A McNab; J Daniel Bireley; Natalya Machado; Eric C Klawiter; Choukri Mekkaoui; Lawrence L Wald; Aapo Nummenmaa Journal: Brain Struct Funct Date: 2019-09-28 Impact factor: 3.270
Authors: Kerstin Hammernik; Teresa Klatzer; Erich Kobler; Michael P Recht; Daniel K Sodickson; Thomas Pock; Florian Knoll Journal: Magn Reson Med Date: 2017-11-08 Impact factor: 4.668
Authors: Florian Knoll; Kerstin Hammernik; Erich Kobler; Thomas Pock; Michael P Recht; Daniel K Sodickson Journal: Magn Reson Med Date: 2018-05-17 Impact factor: 4.668
Authors: Mark Jenkinson; Christian F Beckmann; Timothy E J Behrens; Mark W Woolrich; Stephen M Smith Journal: Neuroimage Date: 2011-09-16 Impact factor: 6.556
Authors: Kevin T Chen; Enhao Gong; Fabiola Bezerra de Carvalho Macruz; Junshen Xu; Athanasia Boumis; Mehdi Khalighi; Kathleen L Poston; Sharon J Sha; Michael D Greicius; Elizabeth Mormino; John M Pauly; Shyam Srinivas; Greg Zaharchuk Journal: Radiology Date: 2018-12-11 Impact factor: 29.146
Authors: Yabo Fu; Hao Zhang; Eric D Morris; Carri K Glide-Hurst; Suraj Pai; Alberto Traverso; Leonard Wee; Ibrahim Hadzic; Per-Ivar Lønne; Chenyang Shen; Tian Liu; Xiaofeng Yang Journal: IEEE Trans Radiat Plasma Med Sci Date: 2021-08-24