Literature DB >> 32778845

Functional characterization of a PROTAC directed against BRAF mutant V600E.

Ganna Posternak1,2,3, Xiaojing Tang1, Pierre Maisonneuve1, Ting Jin4, Hugo Lavoie4, Salima Daou1, Stephen Orlicky1, Theo Goullet de Rugy1, Lauren Caldwell1, Kin Chan1, Ahmed Aman2,5, Michael Prakesch2, Gennady Poda2,5, Pavel Mader1, Cassandra Wong1, Stefan Maier1, Julia Kitaygorodsky1,6, Brett Larsen1, Karen Colwill1, Zhe Yin1,7, Derek F Ceccarelli1, Robert A Batey3, Mikko Taipale6,8, Igor Kurinov9, David Uehling2, Jeff Wrana1,6, Daniel Durocher1,6, Anne-Claude Gingras1,6, Rima Al-Awar2, Marc Therrien10,11, Frank Sicheri12,13,14.   

Abstract

The RAF family kinases function in the RAS-ERK pathway to transmit signals from activated RAS to the downstream kinases MEK and ERK. This pathway regulates cell proliferation, differentiation and survival, enabling mutations in RAS and RAF to act as potent drivers of human cancers. Drugs targeting the prevalent oncogenic mutant BRAF(V600E) have shown great efficacy in the clinic, but long-term effectiveness is limited by resistance mechanisms that often exploit the dimerization-dependent process by which RAF kinases are activated. Here, we investigated a proteolysis-targeting chimera (PROTAC) approach to BRAF inhibition. The most effective PROTAC, termed P4B, displayed superior specificity and inhibitory properties relative to non-PROTAC controls in BRAF(V600E) cell lines. In addition, P4B displayed utility in cell lines harboring alternative BRAF mutations that impart resistance to conventional BRAF inhibitors. This work provides a proof of concept for a substitute to conventional chemical inhibition to therapeutically constrain oncogenic BRAF.

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Year:  2020        PMID: 32778845      PMCID: PMC7862923          DOI: 10.1038/s41589-020-0609-7

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  44 in total

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Authors:  Hugo Lavoie; Marc Therrien
Journal:  Nat Rev Mol Cell Biol       Date:  2015-05       Impact factor: 94.444

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Authors:  J Reiner
Journal:  Klin Monbl Augenheilkd       Date:  1971-02       Impact factor: 0.700

3.  Crystal structure of a BRAF kinase domain monomer explains basis for allosteric regulation.

Authors:  Neroshan Thevakumaran; Hugo Lavoie; David A Critton; Andrew Tebben; Anne Marinier; Frank Sicheri; Marc Therrien
Journal:  Nat Struct Mol Biol       Date:  2014-12-01       Impact factor: 15.369

Review 4.  Mutant BRAF melanomas--dependence and resistance.

Authors:  Poulikos I Poulikakos; Neal Rosen
Journal:  Cancer Cell       Date:  2011-01-18       Impact factor: 31.743

Review 5.  Ras-Mediated Activation of the Raf Family Kinases.

Authors:  Elizabeth M Terrell; Deborah K Morrison
Journal:  Cold Spring Harb Perspect Med       Date:  2019-01-02       Impact factor: 6.915

6.  Melanomas acquire resistance to B-RAF(V600E) inhibition by RTK or N-RAS upregulation.

Authors:  Ramin Nazarian; Hubing Shi; Qi Wang; Xiangju Kong; Richard C Koya; Hane Lee; Zugen Chen; Mi-Kyung Lee; Narsis Attar; Hooman Sazegar; Thinle Chodon; Stanley F Nelson; Grant McArthur; Jeffrey A Sosman; Antoni Ribas; Roger S Lo
Journal:  Nature       Date:  2010-11-24       Impact factor: 49.962

7.  A dimerization-dependent mechanism drives RAF catalytic activation.

Authors:  Thanashan Rajakulendran; Malha Sahmi; Martin Lefrançois; Frank Sicheri; Marc Therrien
Journal:  Nature       Date:  2009-09-02       Impact factor: 49.962

8.  RAF inhibitor resistance is mediated by dimerization of aberrantly spliced BRAF(V600E).

Authors:  Poulikos I Poulikakos; Yogindra Persaud; Manickam Janakiraman; Xiangju Kong; Charles Ng; Gatien Moriceau; Hubing Shi; Mohammad Atefi; Bjoern Titz; May Tal Gabay; Maayan Salton; Kimberly B Dahlman; Madhavi Tadi; Jennifer A Wargo; Keith T Flaherty; Mark C Kelley; Tom Misteli; Paul B Chapman; Jeffrey A Sosman; Thomas G Graeber; Antoni Ribas; Roger S Lo; Neal Rosen; David B Solit
Journal:  Nature       Date:  2011-11-23       Impact factor: 49.962

9.  BRAF(V600E) Kinase Domain Duplication Identified in Therapy-Refractory Melanoma Patient-Derived Xenografts.

Authors:  Kristel Kemper; Oscar Krijgsman; Xiangjun Kong; Paulien Cornelissen-Steijger; Aida Shahrabi; Fleur Weeber; Daphne L van der Velden; Onno B Bleijerveld; Thomas Kuilman; Roel J C Kluin; Chong Sun; Emile E Voest; Young Seok Ju; Ton N M Schumacher; A F Maarten Altelaar; Ultan McDermott; David J Adams; Christian U Blank; John B Haanen; Daniel S Peeper
Journal:  Cell Rep       Date:  2016-06-16       Impact factor: 9.423

10.  Inhibitors that stabilize a closed RAF kinase domain conformation induce dimerization.

Authors:  Hugo Lavoie; Neroshan Thevakumaran; Gwenaëlle Gavory; John J Li; Abbas Padeganeh; Sébastien Guiral; Jean Duchaine; Daniel Y L Mao; Michel Bouvier; Frank Sicheri; Marc Therrien
Journal:  Nat Chem Biol       Date:  2013-05-19       Impact factor: 15.040

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  20 in total

Review 1.  Preclinical and Clinical Advances of Targeted Protein Degradation as a Novel Cancer Therapeutic Strategy: An Oncologist Perspective.

Authors:  Xinrui Yang; He Yin; Richard D Kim; Jason B Fleming; Hao Xie
Journal:  Target Oncol       Date:  2020-12-28       Impact factor: 4.493

2.  Encoding BRAF inhibitor functions in protein degraders.

Authors:  Daniel S J Miller; Sabine A Voell; Izidor Sosič; Matic Proj; Olivia W Rossanese; Gregor Schnakenburg; Michael Gütschow; Ian Collins; Christian Steinebach
Journal:  RSC Med Chem       Date:  2022-05-05

Review 3.  PROTACs: great opportunities for academia and industry (an update from 2020 to 2021).

Authors:  Ming He; Chaoguo Cao; Zhihao Ni; Yongbo Liu; Peilu Song; Shuang Hao; Yuna He; Xiuyun Sun; Yu Rao
Journal:  Signal Transduct Target Ther       Date:  2022-06-09

4.  Exploring Degradation of Mutant and Wild-Type Epidermal Growth Factor Receptors Induced by Proteolysis-Targeting Chimeras.

Authors:  Xufen Yu; Meng Cheng; Kaylene Lu; Yudao Shen; Yue Zhong; Jing Liu; Yue Xiong; Jian Jin
Journal:  J Med Chem       Date:  2022-06-08       Impact factor: 8.039

5.  Potent and Selective Mitogen-Activated Protein Kinase Kinase 1/2 (MEK1/2) Heterobifunctional Small-molecule Degraders.

Authors:  Jianping Hu; Jieli Wei; Hyerin Yim; Li Wang; Ling Xie; Margaret S Jin; Md Kabir; Lihuai Qin; Xian Chen; Jing Liu; Jian Jin
Journal:  J Med Chem       Date:  2020-12-07       Impact factor: 7.446

Review 6.  Targeted protein degradation: A promise for undruggable proteins.

Authors:  Kusal T G Samarasinghe; Craig M Crews
Journal:  Cell Chem Biol       Date:  2021-05-17       Impact factor: 9.039

7.  Therapeutic targeting of RNA-binding protein by RNA-PROTAC.

Authors:  Xinyi Li; Wenchen Pu; Song Chen; Yong Peng
Journal:  Mol Ther       Date:  2021-05-12       Impact factor: 12.910

Review 8.  Trends in kinase drug discovery: targets, indications and inhibitor design.

Authors:  Misty M Attwood; Doriano Fabbro; Aleksandr V Sokolov; Stefan Knapp; Helgi B Schiöth
Journal:  Nat Rev Drug Discov       Date:  2021-08-05       Impact factor: 84.694

Review 9.  Advancing targeted protein degradation for cancer therapy.

Authors:  Brandon Dale; Meng Cheng; Kwang-Su Park; H Ümit Kaniskan; Yue Xiong; Jian Jin
Journal:  Nat Rev Cancer       Date:  2021-06-15       Impact factor: 60.716

Review 10.  Opportunities and Challenges of Small Molecule Induced Targeted Protein Degradation.

Authors:  Ming He; Wenxing Lv; Yu Rao
Journal:  Front Cell Dev Biol       Date:  2021-06-22
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