Literature DB >> 34131295

Advancing targeted protein degradation for cancer therapy.

Brandon Dale1,2,3,4, Meng Cheng5,6, Kwang-Su Park1,2,3,4, H Ümit Kaniskan1,2,3,4, Yue Xiong7,8,9,10, Jian Jin11,12,13,14.   

Abstract

The human proteome contains approximately 20,000 proteins, and it is estimated that more than 600 of them are functionally important for various types of cancers, including nearly 400 non-enzyme proteins that are challenging to target by traditional occupancy-driven pharmacology. Recent advances in the development of small-molecule degraders, including molecular glues and heterobifunctional degraders such as proteolysis-targeting chimeras (PROTACs), have made it possible to target many proteins that were previously considered undruggable. In particular, PROTACs form a ternary complex with a hijacked E3 ubiquitin ligase and a target protein, leading to polyubiquitination and degradation of the target protein. The broad applicability of this approach is facilitated by the flexibility of individual E3 ligases to recognize different substrates. The vast majority of the approximately 600 human E3 ligases have not been explored, thus presenting enormous opportunities to develop degraders that target oncoproteins with tissue, tumour and subcellular selectivity. In this Review, we first discuss the molecular basis of targeted protein degradation. We then offer a comprehensive account of the most promising degraders in development as cancer therapies to date. Lastly, we provide an overview of opportunities and challenges in this exciting field.
© 2021. Springer Nature Limited.

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Year:  2021        PMID: 34131295      PMCID: PMC8463487          DOI: 10.1038/s41568-021-00365-x

Source DB:  PubMed          Journal:  Nat Rev Cancer        ISSN: 1474-175X            Impact factor:   60.716


  232 in total

1.  A family of diverse Cul4-Ddb1-interacting proteins includes Cdt2, which is required for S phase destruction of the replication factor Cdt1.

Authors:  Jianping Jin; Emily E Arias; Jing Chen; J Wade Harper; Johannes C Walter
Journal:  Mol Cell       Date:  2006-09-01       Impact factor: 17.970

Review 2.  Proteolysis targeting chimeras (PROTACs) in 'beyond rule-of-five' chemical space: Recent progress and future challenges.

Authors:  Scott D Edmondson; Bin Yang; Charlene Fallan
Journal:  Bioorg Med Chem Lett       Date:  2019-04-20       Impact factor: 2.823

3.  Mapping the Degradable Kinome Provides a Resource for Expedited Degrader Development.

Authors:  Katherine A Donovan; Fleur M Ferguson; Jonathan W Bushman; Nicholas A Eleuteri; Debabrata Bhunia; SeongShick Ryu; Li Tan; Kun Shi; Hong Yue; Xiaoxi Liu; Dennis Dobrovolsky; Baishan Jiang; Jinhua Wang; Mingfeng Hao; Inchul You; Mingxing Teng; Yanke Liang; John Hatcher; Zhengnian Li; Theresa D Manz; Brian Groendyke; Wanyi Hu; Yunju Nam; Sandip Sengupta; Hanna Cho; Injae Shin; Michael P Agius; Irene M Ghobrial; Michelle W Ma; Jianwei Che; Sara J Buhrlage; Taebo Sim; Nathanael S Gray; Eric S Fischer
Journal:  Cell       Date:  2020-12-03       Impact factor: 41.582

Review 4.  Inhibitors of Protein Methyltransferases and Demethylases.

Authors:  H Ümit Kaniskan; Michael L Martini; Jian Jin
Journal:  Chem Rev       Date:  2017-03-24       Impact factor: 60.622

5.  Rbx1 flexible linker facilitates cullin-RING ligase function before neddylation and after deneddylation.

Authors:  Jin Liu; Ruth Nussinov
Journal:  Biophys J       Date:  2010-08-04       Impact factor: 4.033

6.  Delineating the role of cooperativity in the design of potent PROTACs for BTK.

Authors:  Adelajda Zorba; Chuong Nguyen; Yingrong Xu; Jeremy Starr; Kris Borzilleri; James Smith; Hongyao Zhu; Kathleen A Farley; WeiDong Ding; James Schiemer; Xidong Feng; Jeanne S Chang; Daniel P Uccello; Jennifer A Young; Carmen N Garcia-Irrizary; Lara Czabaniuk; Brandon Schuff; Robert Oliver; Justin Montgomery; Matthew M Hayward; Jotham Coe; Jinshan Chen; Mark Niosi; Suman Luthra; Jaymin C Shah; Ayman El-Kattan; Xiayang Qiu; Graham M West; Mark C Noe; Veerabahu Shanmugasundaram; Adam M Gilbert; Matthew F Brown; Matthew F Calabrese
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-16       Impact factor: 11.205

7.  Targeting of protein ubiquitination by BTB-Cullin 3-Roc1 ubiquitin ligases.

Authors:  Manabu Furukawa; Yizhou Joseph He; Christoph Borchers; Yue Xiong
Journal:  Nat Cell Biol       Date:  2003-10-05       Impact factor: 28.824

8.  p63 is a cereblon substrate involved in thalidomide teratogenicity.

Authors:  Tomoko Asatsuma-Okumura; Hideki Ando; Marco De Simone; Junichi Yamamoto; Tomomi Sato; Nobuyuki Shimizu; Kazuhide Asakawa; Yuki Yamaguchi; Takumi Ito; Luisa Guerrini; Hiroshi Handa
Journal:  Nat Chem Biol       Date:  2019-10-07       Impact factor: 15.040

9.  Molecular architecture of the ankyrin SOCS box family of Cul5-dependent E3 ubiquitin ligases.

Authors:  João R C Muniz; Kunde Guo; Nadia J Kershaw; Vikram Ayinampudi; Frank von Delft; Jeffrey J Babon; Alex N Bullock
Journal:  J Mol Biol       Date:  2013-06-25       Impact factor: 5.469

10.  Polycomb- and Methylation-Independent Roles of EZH2 as a Transcription Activator.

Authors:  Jung Kim; Yongik Lee; Xiaodong Lu; Bing Song; Ka-Wing Fong; Qi Cao; Jonathan D Licht; Jonathan C Zhao; Jindan Yu
Journal:  Cell Rep       Date:  2018-12-04       Impact factor: 9.423

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  48 in total

Review 1.  Smart PROTACs Enable Controllable Protein Degradation for Precision Cancer Therapy.

Authors:  Lixia Chen; Xinqiang Wan; Xiangxiang Shan; Wenzhang Zha; Rengen Fan
Journal:  Mol Diagn Ther       Date:  2022-04-26       Impact factor: 4.074

2.  Design, Synthesis, and Evaluation of Potent, Selective, and Bioavailable AKT Kinase Degraders.

Authors:  Xufen Yu; Jia Xu; Ling Xie; Li Wang; Yudao Shen; Kaitlyn M Cahuzac; Xian Chen; Jing Liu; Ramon E Parsons; Jian Jin
Journal:  J Med Chem       Date:  2021-12-02       Impact factor: 7.446

3.  [Regulatory mechanism of interferon regulatory factor 1 by α-synuclein in mouse Parkinson's disease model].

Authors:  F Mu; X Chen; X DU; Q Jiao; M Bi; H Jiang
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2021-11-20

4.  Targeted delivery of a PROTAC induced PDEδ degrader by a biomimetic drug delivery system for enhanced cytotoxicity against pancreatic cancer cells.

Authors:  Ruyu Fan; Shipeng He; Yongqing Wang; Jiaming Qiao; Hongcheng Liu; Levon Galstyan; Arman Ghazaryan; Hui Cai; Shini Feng; Pinyue Ni; Guoqiang Dong; Huafei Li
Journal:  Am J Cancer Res       Date:  2022-03-15       Impact factor: 6.166

5.  A NSD3-targeted PROTAC suppresses NSD3 and cMyc oncogenic nodes in cancer cells.

Authors:  Chenxi Xu; Fanye Meng; Kwang-Su Park; Aaron J Storey; Weida Gong; Yi-Hsuan Tsai; Elisa Gibson; Stephanie D Byrum; Dongxu Li; Rick D Edmondson; Samuel G Mackintosh; Masoud Vedadi; Ling Cai; Alan J Tackett; H Ümit Kaniskan; Jian Jin; Gang Greg Wang
Journal:  Cell Chem Biol       Date:  2021-08-31       Impact factor: 8.116

6.  Targeting Triple-Negative Breast Cancer by a Novel Proteolysis Targeting Chimera Degrader of Enhancer of Zeste Homolog 2.

Authors:  Brandon Dale; Chris Anderson; Kwang-Su Park; H Ümit Kaniskan; Anqi Ma; Yudao Shen; Chengwei Zhang; Ling Xie; Xian Chen; Xufen Yu; Jian Jin
Journal:  ACS Pharmacol Transl Sci       Date:  2022-06-24

7.  Discovery of a First-in-Class Degrader for Nuclear Receptor Binding SET Domain Protein 2 (NSD2) and Ikaros/Aiolos.

Authors:  Fanye Meng; Chenxi Xu; Kwang-Su Park; H Ümit Kaniskan; Gang Greg Wang; Jian Jin
Journal:  J Med Chem       Date:  2022-07-27       Impact factor: 8.039

8.  Folate-Guided Protein Degradation by Immunomodulatory Imide Drug-Based Molecular Glues and Proteolysis Targeting Chimeras.

Authors:  He Chen; Jing Liu; H Ümit Kaniskan; Wenyi Wei; Jian Jin
Journal:  J Med Chem       Date:  2021-08-11       Impact factor: 8.039

9.  Discovery of Potent, Selective, and In Vivo Efficacious AKT Kinase Protein Degraders via Structure-Activity Relationship Studies.

Authors:  Xufen Yu; Jia Xu; Yudao Shen; Kaitlyn M Cahuzac; Kwang-Su Park; Brandon Dale; Jing Liu; Ramon E Parsons; Jian Jin
Journal:  J Med Chem       Date:  2022-02-04       Impact factor: 7.446

10.  Ligandability of E3 Ligases for Targeted Protein Degradation Applications.

Authors:  Bridget P Belcher; Carl C Ward; Daniel K Nomura
Journal:  Biochemistry       Date:  2021-09-02       Impact factor: 3.162

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