| Literature DB >> 32775436 |
Xiaoli Meng1, Jun Shu2, Yuwei Xia3, Ruwu Yang1.
Abstract
This study was aimed at building a computed tomography- (CT-) based radiomics approach for the differentiation of sarcomatoid renal cell carcinoma (SRCC) and clear cell renal cell carcinoma (CCRCC). It involved 29 SRCC and 99 CCRCC patient cases, and to each case, 1029 features were collected from each of the corticomedullary phase (CMP) and nephrographic phase (NP) image. Then, features were selected by using the least absolute shrinkage and selection operator regression method and the selected features of the two phases were explored to build three radiomics approaches for SRCC and CCRCC classification. Meanwhile, subjective CT findings were filtered by univariate analysis to construct a radiomics model and further selected by Akaike information criterion for integrating with the selected image features to build the fifth model. Finally, the radiomics models utilized the multivariate logistic regression method for classification and the performance was assessed with receiver operating characteristic curve (ROC) and DeLong test. The radiomics models based on the CMP, the NP, the CMP and NP, the subjective findings, and the combined features achieved the AUC (area under the curve) value of 0.772, 0.938, 0.966, 0.792, and 0.974, respectively. Significant difference was found in AUC values between each of the CMP radiomics model (0.0001 ≤ p ≤ 0.0051) and the subjective findings model (0.0006 ≤ p ≤ 0.0079) and each of the NP radiomics model, the CMP and NP radiomics model, and the combined model. Sarcomatoid change is a common pathway of dedifferentiation likely occurring in all subtypes of renal cell carcinoma, and the CT-based radiomics approaches in this study show the potential for SRCC from CCRCC differentiation.Entities:
Mesh:
Year: 2020 PMID: 32775436 PMCID: PMC7397414 DOI: 10.1155/2020/7103647
Source DB: PubMed Journal: Biomed Res Int Impact factor: 3.411
Figure 1Recruitment pathway for patients in this study.
Figure 2Manual delineation of a SRCC tumor of the same patient at different phases: (a) corticomedullary phase and (b) nephrographic phase.
The characteristics of SRCC and CCRCC patient groups.
| SRCC (29) | CCRCC (99) | Whole set (128) |
| |
|---|---|---|---|---|
| Gender | ||||
| Male | 19 (65.51%) | 70 (70.71%) | 89 (69.53%) | 0.593a |
| Female | 10 (34.48%) | 29 (29.29%) | 39 (30.47%) | |
| Age (yrs, mean ± std) | 55.3 ± 14.0 | 57.6 ± 9.3 | 0.297b | |
| Size (cm, mean ± std) | 10.1 ± 3.0 | 7.7 ± 1.6 | <0.001b | |
| T stage | ||||
| 1b | 6 (20.69%) | 66 (66.67%) | 72 (56.25%) | <0.001c |
| 2 | 11 (37.93%) | 19 (19.19%) | 30 (23.44%) | |
| 3 | 11 (37.93%) | 13 (13.13%) | 24 (18.75%) | |
| 4 | 1 (3.45%) | 1 (1.01%) | 2 (1.56%) | |
yrs: years; std: standard deviation; p < 0.05 is set as significant difference; aχ2 test; bStudent's t-test; cFisher's exact test.
Subjective CT findings of SRCC and CCRCC patient groups.
| Imaging features | SRCC (29) | CCRCC (99) |
|
|---|---|---|---|
| Spread pattern | |||
| Infiltrative | 16 (55.17%) | 12 (12.12%) | <0.001a |
| Noninfiltrative | 13 (44.83%) | 87 (87.88%) | |
| Venous thrombus | |||
| Present | 6 (20.69%) | 3 (3.03%) | 0.001a |
| Absent | 23 (79.31%) | 96 (96.97%) | |
| Intratumoral neovascularity | |||
| Present | 14 (48.28%) | 30 (30.30%) | 0.073a |
| Absent | 15 (51.72) | 69 (60.70%) | |
| Peritumoral neovascularity | |||
| Present | 24 (82.76%) | 58 (58.59%) | 0.017a |
| Absent | 5 (17.24%) | 41 (41.41%) | |
| Calcification | |||
| Present | 13 (44.83%) | 19 (19.19%) | 0.005a |
| Absent | 16 (55.17%) | 80 (80.81%) | |
| Diameter (cm, mean ± std) | 10.1 ± 3.0 | 7.7 ± 1.6 | <0.001b |
std: standard deviation; p < 0.05 is set as significant difference; aχ2 test; bStudent's t-test.
Figure 3Radiomics feature selection by using the LASSO regression method. The optimal α was selected using a tenfold crossvalidation via the minimum of average mean square error. To the CMP features, α = 0.074 and −log(α) = 1.13 (a) and to the NP features, α = 0.028 and −log(α) = 1.55 (c). (b) and (d), respectively, showed the coefficient profiles along the full path of possible α values in the CMP and the NP feature selection. In addition, dashed vertical lines were drawn at the optimal α based on the minimum of average mean square error in (a–d).
The selected radiomics features and corresponding coefficients.
| Selected CMP features | Coefficients |
| First-order features | |
| squareroot_Energy | 0.0003 |
| squareroot_Maximum | 0.0057 |
| wavelet-LHH_Skewness | 0.0069 |
| Shape features | |
| original_Minoraxis | 0.0312 |
| Texture features | |
| Gray-level run length matrix (GLRLM) | |
| exponential_RunVariance | 0.0037 |
| squareroot_GrayLevelNonUniformity | 0.0926 |
| Selected NP features | |
| First-order features | |
| wavelet-HLH_Skewness | -0.04831 |
| wavelet-LHH_Median | -0.0272 |
| wavelet-HHH_Median | -0.0076 |
| squareroot_Energy | 0.0002 |
| wavelet-LLH_fskewness | 0.0019 |
| square_Kurtosis | 0.0337 |
| wavelet-LHL_Mean | 0.0417 |
| wavelet-LLH_Kurtosis | 0.0613 |
| Shape features | |
| original_SurfaceArea | 2.85E-5 |
| original_RunVariance | 0.0210 |
| original_SphericalDisproportion | 0.0226 |
| Texture features | |
| Gray-level cooccurrence matrix (GLCM) | |
| square_Idmn | -0.0196 |
| square_Correlation | -0.0075 |
| wavelet-HHH_ClusterProminence | 0.0152 |
| squareroot_DifferenceVariance | 0.0422 |
| Gray-level run length matrix (GLRLM) | |
| wavelet-LLL_ShortRunLowGrayLevelEmphasis | -0.0075 |
| square_ShortRunLowGrayLevelEmphasis | 0.0017 |
| wavelet-HHH_RunVariance | 0.0225 |
| exponential_RunVariance | 0.0242 |
| exponential_RunEntropy | 0.0246 |
| exponential_ShortRunLowGrayLevelEmphasis | 0.0499 |
| Gray-level size zone matrix (GLSZM) | |
| square_ZoneVariance | -0.0285 |
| wavelet-HLL_SizeZoneNonUniformityNormalized | -0.0173 |
| wavelet-LLL_LowGrayLevelZoneEmphasis | -0.0086 |
| wavelet-HLL_GrayLevelNonUniformity | -0.0063 |
| wavelet-LLL_ZoneVariance | 0.0022 |
| wavelet-HHH_LargeAreaEmphasis | 0.0183 |
| logarithm_LargeAreaLowGrayLevelEmphasis | 0.0437 |
| logarithm_GrayLevelNonUniformity | 0.0938 |
The diagnostic performance of the five radiomics approaches.
| AUC (95% CI) | Accuracy (%) | Sensitivity (%) | Specificity (%) | |
|---|---|---|---|---|
| Subjective CT findings | 0.792 | 78.12 | 82.76 | 75.76 |
| (0.712-0.859) | ||||
| CMP features | 0.772 | 78.12 | 65.52 | 82.83 |
| (0.689-0.841) | ||||
| NP features | 0.938 | 90.62 | 89.66 | 91.92 |
| (0.881-0.973) | ||||
| CMP + NP features | 0.966 | 93.75 | 89.66 | 94.95 |
| (0.918-0.990) | ||||
| Combined features | 0.974 | 93.75 | 96.55 | 88.89 |
| (0.924-0.992) |
Figure 4ROC curves of five radiomics approaches for differentiation of SRCC and CCRCC cases. The models are the subjective findings model (blue line), the CMP radiomics model (green line), the NP radiomics model (orange line), the CMP and NP radiomics model (red line), and the combined model (purple line). In addition, the brown dashed line shows the prediction distribution of random inputted features.