Literature DB >> 32763188

Equitable Expanded Carrier Screening Needs Indigenous Clinical and Population Genomic Data.

Simon Easteal1, Ruth M Arkell2, Renzo F Balboa3, Shayne A Bellingham3, Alex D Brown4, Tom Calma5, Matthew C Cook6, Megan Davis7, Hugh J S Dawkins8, Marcel E Dinger9, Michael S Dobbie10, Ashley Farlow11, Kylie G Gwynne12, Azure Hermes3, Wendy E Hoy13, Misty R Jenkins14, Simon H Jiang6, Warren Kaplan15, Stephen Leslie11, Bastien Llamas16, Graham J Mann2, Brendan J McMorran2, Rebekah E McWhirter17, Cliff J Meldrum18, Shivashankar H Nagaraj19, Saul J Newman20, Jack S Nunn21, Lyndon Ormond-Parker22, Neil J Orr5, Devashi Paliwal10, Hardip R Patel3, Glenn Pearson23, Greg R Pratt24, Boe Rambaldini5, Lynette W Russell25, Ravi Savarirayan26, Matthew Silcocks11, John C Skinner5, Yassine Souilmi27, Carola G Vinuesa2, Gareth Baynam28.   

Abstract

Expanded carrier screening (ECS) for recessive monogenic diseases requires prior knowledge of genomic variation, including DNA variants that cause disease. The composition of pathogenic variants differs greatly among human populations, but historically, research about monogenic diseases has focused mainly on people with European ancestry. By comparison, less is known about pathogenic DNA variants in people from other parts of the world. Consequently, inclusion of currently underrepresented Indigenous and other minority population groups in genomic research is essential to enable equitable outcomes in ECS and other areas of genomic medicine. Here, we discuss this issue in relation to the implementation of ECS in Australia, which is currently being evaluated as part of the national Government's Genomics Health Futures Mission. We argue that significant effort is required to build an evidence base and genomic reference data so that ECS can bring significant clinical benefit for many Aboriginal and/or Torres Strait Islander Australians. These efforts are essential steps to achieving the Australian Government's objectives and its commitment "to leveraging the benefits of genomics in the health system for all Australians." They require culturally safe, community-led research and community involvement embedded within national health and medical genomics programs to ensure that new knowledge is integrated into medicine and health services in ways that address the specific and articulated cultural and health needs of Indigenous people. Until this occurs, people who do not have European ancestry are at risk of being, in relative terms, further disadvantaged.
Copyright © 2020 American Society of Human Genetics. All rights reserved.

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Year:  2020        PMID: 32763188      PMCID: PMC7413856          DOI: 10.1016/j.ajhg.2020.06.005

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  57 in total

1.  A germline MTOR mutation in Aboriginal Australian siblings with intellectual disability, dysmorphism, macrocephaly, and small thoraces.

Authors:  Gareth Baynam; Angela Overkov; Mark Davis; Kym Mina; Lyn Schofield; Richard Allcock; Nigel Laing; Matthew Cook; Hugh Dawkins; Jack Goldblatt
Journal:  Am J Med Genet A       Date:  2015-04-06       Impact factor: 2.802

2.  Finding Middle Ground in Constructing a Clinically Useful Expanded Carrier Screening Panel.

Authors:  Blair Stevens; Nevena Krstic; Malorie Jones; Lauren Murphy; Jennifer Hoskovec
Journal:  Obstet Gynecol       Date:  2017-08       Impact factor: 7.661

Review 3.  Ashkenazi Jewish population screening for Tay-Sachs disease: the international and Australian experience.

Authors:  Raelia M Lew; Leslie Burnett; Anné L Proos; Kristine Barlow-Stewart; Martin B Delatycki; Agnes Bankier; Harry Aizenberg; Michael J Field; Yemima Berman; Ronald Fleischer; Michael Fietz
Journal:  J Paediatr Child Health       Date:  2014-06-13       Impact factor: 1.954

Review 4.  Where genotype is not predictive of phenotype: towards an understanding of the molecular basis of reduced penetrance in human inherited disease.

Authors:  David N Cooper; Michael Krawczak; Constantin Polychronakos; Chris Tyler-Smith; Hildegard Kehrer-Sawatzki
Journal:  Hum Genet       Date:  2013-07-03       Impact factor: 4.132

5.  Human occupation of northern Australia by 65,000 years ago.

Authors:  Chris Clarkson; Zenobia Jacobs; Ben Marwick; Richard Fullagar; Lynley Wallis; Mike Smith; Richard G Roberts; Elspeth Hayes; Kelsey Lowe; Xavier Carah; S Anna Florin; Jessica McNeil; Delyth Cox; Lee J Arnold; Quan Hua; Jillian Huntley; Helen E A Brand; Tiina Manne; Andrew Fairbairn; James Shulmeister; Lindsey Lyle; Makiah Salinas; Mara Page; Kate Connell; Gayoung Park; Kasih Norman; Tessa Murphy; Colin Pardoe
Journal:  Nature       Date:  2017-07-19       Impact factor: 49.962

6.  Analysis of 589,306 genomes identifies individuals resilient to severe Mendelian childhood diseases.

Authors:  Rong Chen; Lisong Shi; Jörg Hakenberg; Brian Naughton; Pamela Sklar; Jianguo Zhang; Hanlin Zhou; Lifeng Tian; Om Prakash; Mathieu Lemire; Patrick Sleiman; Wei-Yi Cheng; Wanting Chen; Hardik Shah; Yulan Shen; Menachem Fromer; Larsson Omberg; Matthew A Deardorff; Elaine Zackai; Jason R Bobe; Elissa Levin; Thomas J Hudson; Leif Groop; Jun Wang; Hakon Hakonarson; Anne Wojcicki; George A Diaz; Lisa Edelmann; Eric E Schadt; Stephen H Friend
Journal:  Nat Biotechnol       Date:  2016-04-11       Impact factor: 54.908

7.  PhenoModifier: a genetic modifier database for elucidating the genetic basis of human phenotypic variation.

Authors:  Hong Sun; Yangfan Guo; Xiaoping Lan; Jia Jia; Xiaoshu Cai; Guoqing Zhang; Jingjing Xie; Qian Liang; Yixue Li; Guangjun Yu
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

8.  ACMG position statement on prenatal/preconception expanded carrier screening.

Authors:  Wayne W Grody; Barry H Thompson; Anthony R Gregg; Lora H Bean; Kristin G Monaghan; Adele Schneider; Roger V Lebo
Journal:  Genet Med       Date:  2013-04-25       Impact factor: 8.822

9.  Assessing the Pathogenicity, Penetrance, and Expressivity of Putative Disease-Causing Variants in a Population Setting.

Authors:  Caroline F Wright; Ben West; Marcus Tuke; Samuel E Jones; Kashyap Patel; Thomas W Laver; Robin N Beaumont; Jessica Tyrrell; Andrew R Wood; Timothy M Frayling; Andrew T Hattersley; Michael N Weedon
Journal:  Am J Hum Genet       Date:  2019-01-18       Impact factor: 11.025

Review 10.  Expanded universal carrier screening and its implementation within a publicly funded healthcare service.

Authors:  Charlotte A Rowe; Caroline F Wright
Journal:  J Community Genet       Date:  2019-12-11
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  6 in total

1.  "This is my boy's health! Talk straight to me!" perspectives on accessible and culturally safe care among Aboriginal and Torres Strait Islander patients of clinical genetics services.

Authors:  Philippa Dalach; Ravi Savarirayan; Gareth Baynam; Julie McGaughran; Emma Kowal; Libby Massey; Misty Jenkins; Yin Paradies; Margaret Kelaher
Journal:  Int J Equity Health       Date:  2021-04-17

2.  The Opportunities and Challenges of Integrating Population Histories Into Genetic Studies for Diverse Populations: A Motivating Example From Native Hawaiians.

Authors:  Charleston W K Chiang
Journal:  Front Genet       Date:  2021-09-27       Impact factor: 4.599

3.  Ask the people: developing guidelines for genomic research with Aboriginal and Torres Strait Islander peoples.

Authors:  Sid Kaladharan; Miranda E Vidgen; John V Pearson; Victoria K Donoghue; David C Whiteman; Nicola Waddell; Gregory Pratt
Journal:  BMJ Glob Health       Date:  2021-11

4.  Co-designing genomics research with a large group of donor-conceived siblings.

Authors:  Jack S Nunn; Marilyn Crawshaw; Paul Lacaze
Journal:  Res Involv Engagem       Date:  2021-12-16

5.  Association of Built Environmental Features with Rates of Infectious Diseases in Remote Indigenous Communities in the Northern Territory, Australia.

Authors:  Amal Chakraborty; Victor Maduabuchi Oguoma; Neil T Coffee; Peter Markey; Alwin Chong; Margaret Cargo; Mark Daniel
Journal:  Healthcare (Basel)       Date:  2022-01-17

6.  Challenges in providing residual risks in carrier testing.

Authors:  Robert Luke Nussbaum; Robert Nathan Slotnick; Neil J Risch
Journal:  Prenat Diagn       Date:  2021-06-13       Impact factor: 3.050

  6 in total

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