Literature DB >> 32756943

Smarca5-mediated epigenetic programming facilitates fetal HSPC development in vertebrates.

Yanyan Ding1,2,3, Wen Wang4, Dongyuan Ma1,2,3, Guixian Liang1,2,3, Zhixin Kang1,2,3, Yuanyuan Xue1,2,3, Yifan Zhang1,2,3, Lu Wang5, Jian Heng1,2,3, Yong Zhang4, Feng Liu1,2,3.   

Abstract

Nascent hematopoietic stem and progenitor cells (HSPCs) acquire definitive hematopoietic characteristics only when they develop into fetal HSPCs; however, the mechanisms underlying fetal HSPC development are poorly understood. Here, we profiled the chromatin accessibility and transcriptional features of zebrafish nascent and fetal HSPCs using ATAC-seq and RNA-seq and revealed dynamic changes during HSPC transition. Functional assays demonstrated that chromatin remodeler-mediated epigenetic programming facilitates fetal HSPC development in vertebrates. Systematical screening of chromatin remodeler-related genes identified that smarca5 is responsible for the maintenance of chromatin accessibility at promoters of hematopoiesis-related genes in fetal HSPCs. Mechanistically, Smarca5 interacts with nucleolin to promote chromatin remodeling, thereby facilitating genomic binding of transcription factors to regulate expression of hematopoietic regulators such as bcl11ab. Our results unravel a new role of epigenetic regulation and reveal that Smarca5-mediated epigenetic programming is responsible for fetal HSPC development, which will provide new insights into the generation of functional HSPCs both in vivo and in vitro.
© 2021 by The American Society of Hematology.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 32756943      PMCID: PMC7820875          DOI: 10.1182/blood.2020005219

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  55 in total

1.  Nucleolin regulates gene expression in CD34-positive hematopoietic cells.

Authors:  Edgar Grinstein; Yihua Du; Simeon Santourlidis; Julia Christ; Markus Uhrberg; Peter Wernet
Journal:  J Biol Chem       Date:  2007-01-24       Impact factor: 5.157

Review 2.  Hematopoietic Hierarchy - An Updated Roadmap.

Authors:  Yifan Zhang; Shuai Gao; Jun Xia; Feng Liu
Journal:  Trends Cell Biol       Date:  2018-06-20       Impact factor: 20.808

Review 3.  Open Chromatin, Epigenetic Plasticity, and Nuclear Organization in Pluripotency.

Authors:  Sharon Schlesinger; Eran Meshorer
Journal:  Dev Cell       Date:  2019-01-28       Impact factor: 12.270

4.  Chromatin remodeling: a complex affair.

Authors:  Nathan Gioacchini; Craig L Peterson
Journal:  EMBO Rep       Date:  2017-08-23       Impact factor: 8.807

5.  tp53 mutant zebrafish develop malignant peripheral nerve sheath tumors.

Authors:  Stéphane Berghmans; Ryan D Murphey; Erno Wienholds; Donna Neuberg; Jeffery L Kutok; Christopher D M Fletcher; John P Morris; Ting Xi Liu; Stefan Schulte-Merker; John P Kanki; Ronald Plasterk; Leonard I Zon; A Thomas Look
Journal:  Proc Natl Acad Sci U S A       Date:  2005-01-03       Impact factor: 11.205

6.  The identification and characterization of zebrafish hematopoietic stem cells.

Authors:  Dongdong Ma; Jing Zhang; Hui-feng Lin; Joseph Italiano; Robert I Handin
Journal:  Blood       Date:  2011-05-17       Impact factor: 22.113

Review 7.  Transcription factors and 3D genome conformation in cell-fate decisions.

Authors:  Ralph Stadhouders; Guillaume J Filion; Thomas Graf
Journal:  Nature       Date:  2019-05-15       Impact factor: 49.962

Review 8.  From haematopoietic stem cells to complex differentiation landscapes.

Authors:  Elisa Laurenti; Berthold Göttgens
Journal:  Nature       Date:  2018-01-24       Impact factor: 49.962

9.  The chromatin remodeler Brg1 activates enhancer repertoires to establish B cell identity and modulate cell growth.

Authors:  Claudia Bossen; Caroline S Murre; Aaron N Chang; Robert Mansson; Hans-Reimer Rodewald; Cornelis Murre
Journal:  Nat Immunol       Date:  2015-05-18       Impact factor: 25.606

10.  The transcriptional landscape of hematopoietic stem cell ontogeny.

Authors:  Shannon McKinney-Freeman; Patrick Cahan; Hu Li; Scott A Lacadie; Hsuan-Ting Huang; Matthew Curran; Sabine Loewer; Olaia Naveiras; Katie L Kathrein; Martina Konantz; Erin M Langdon; Claudia Lengerke; Leonard I Zon; James J Collins; George Q Daley
Journal:  Cell Stem Cell       Date:  2012-11-02       Impact factor: 24.633

View more
  7 in total

1.  Remodel your way to fetal hematopoiesis.

Authors:  Owen J Tamplin
Journal:  Blood       Date:  2021-01-14       Impact factor: 22.113

Review 2.  Role of ATP-dependent chromatin remodelers in hematopoietic stem and progenitor cell maintenance.

Authors:  Zhaowei Tu; Yi Zheng
Journal:  Curr Opin Hematol       Date:  2022-02-18       Impact factor: 3.218

3.  Long noncoding RNA lncMREF promotes myogenic differentiation and muscle regeneration by interacting with the Smarca5/p300 complex.

Authors:  Wei Lv; Wei Jiang; Hongmei Luo; Qian Tong; Xiaoyu Niu; Xiao Liu; Yang Miao; Jingnan Wang; Yiwen Guo; Jianan Li; Xizhen Zhan; Yunqing Hou; Yaxin Peng; Jian Wang; Shuhong Zhao; Zaiyan Xu; Bo Zuo
Journal:  Nucleic Acids Res       Date:  2022-10-14       Impact factor: 19.160

4.  eccDNAdb: a database of extrachromosomal circular DNA profiles in human cancers.

Authors:  Li Peng; Nan Zhou; Chao-Yang Zhang; Guan-Cheng Li; Xiao-Qing Yuan
Journal:  Oncogene       Date:  2022-04-06       Impact factor: 8.756

Review 5.  Making Blood from the Vessel: Extrinsic and Environmental Cues Guiding the Endothelial-to-Hematopoietic Transition.

Authors:  Wade W Sugden; Trista E North
Journal:  Life (Basel)       Date:  2021-09-29

6.  Chromatin Remodeler Smarca5 Is Required for Cancer-Related Processes of Primary Cell Fitness and Immortalization.

Authors:  Shefali Thakur; Vincent Cahais; Tereza Turkova; Tomas Zikmund; Claire Renard; Tomáš Stopka; Michael Korenjak; Jiri Zavadil
Journal:  Cells       Date:  2022-02-25       Impact factor: 6.600

7.  The chromatin-remodeling enzyme Smarca5 regulates erythrocyte aggregation via Keap1-Nrf2 signaling.

Authors:  Yanyan Ding; Yuzhe Li; Ziqian Zhao; Qiangfeng Cliff Zhang; Feng Liu
Journal:  Elife       Date:  2021-10-26       Impact factor: 8.140

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.