| Literature DB >> 32733536 |
Xiao-Fei Wang1, Bo Liang2, Cheng Chen1, Da-Xiong Zeng1, Yu-Xiu Zhao3, Nan Su1, Wei-Wei Ning1, Wen Yang1, Jian-An Huang1, Ning Gu4, Ye-Han Zhu1.
Abstract
Background: Long intergenic non-protein coding RNA 511 (LINC00511) is upregulated in diverse cancers and involved in prognosis. This study aimed to evaluate the prognostic profile of LINC00511 in cancer patients.Entities:
Keywords: LINC00511; bioinformatics; cancer; meta-analysis; prognostic biomarker; survival
Year: 2020 PMID: 32733536 PMCID: PMC7358593 DOI: 10.3389/fgene.2020.00667
Source DB: PubMed Journal: Front Genet ISSN: 1664-8021 Impact factor: 4.599
Figure 1The flow diagram of this meta-analysis.
The main characteristics of the included studies in this meta-analysis.
| Sun et al. ( | China | NSCLC | 124 (58/66) | I24/II-IV100 | qRT-PCR | ≥2.23-fold | 93 (75%) | 42 m | OS, CP | OS R (MA) | 8 |
| Lu et al. ( | China | BC | 39 (0/39) | I-II13/III-IV26 | qRT-PCR | Mean | 23 (59%) | 60 m | OS, CP | OS Curve | 8 |
| Zhao et al. ( | China | PDA | 140 (78/62) | NR | qRT-PCR | log2 FC (cancer/normal) > 1 | 102 (72.9%) | 60 m | OS, CP | OS R (MA) | 7 |
| Deng et al. ( | China | ccRCC | 49 (21/28) | I-II26/III-IV23 | qRT-PCR | Median | 25 (51%) | 50 m | OS, CP | OS Curve | 8 |
| Liu et al. ( | China | BC | 98 (0/98) | NR | qRT-PCR | Median | 49 (50%) | 60 m | OS, CP | OS Curve | 9 |
| Mao et al. ( | China | CC | 84 (0/84) | IIa 29/IIb-II2b 55 | qRT-PCR | Median | 49 (58.3%) | 60 m | OS, CP | OS Curve | 9 |
| Wang R. P. et al. ( | China | HC | 127 (76/51) | I-II79/III-IV49 | qRT-PCR | Median | 64 (50.4%) | 60 m | OS, CP | OS Curve | 7 |
| Yu et al. ( | China | CC | 92 (0/92) | I-IIa38/IIb-IV54 | qRT-PCR | Median | 46 (50%) | 108 m | OS, CP | OS R (MA) | 7 |
| Zhang J. et al. ( | China | BC | 70 (0/70) | I-II65/III-IV5 | qRT-PCR | NR | 24 (34.3%) | 2300 d | OS, CP | OS Curve | 7 |
BC, breast cancer; CC, cervical cancer; ccRCC, clear cell renal cell carcinoma; CP, clinical parameter; d, days; F, female; FC, fold changes; HC, hepatocellular carcinoma; HR, hazard ratio; M, male; m, months; MA, multivariate analysis; NO, number; NOS, Newcastle Ottawa scale quality criteria.; NR, no report; NSCLC, non-small cell lung cancer; OS, overall survival; PDA, pancreatic ductal adenocarcinoma; qRT-PCR, quantitative real-time polymerase chain reaction; R, reported in text.
Figure 2Forest plots of hazard ratios for the association between LINC00511 expression and overall survival. (A) Overall survival, subgroup analysis based on (B) different cancer types, (C) HR obtain method, (D) cut-off, (E) sample size and (F) follow up time.
Figure 3Heterogeneity analysis for the meta-analysis of OS including sensitivity analysis (A), Bgger's test (B), Egger's test (C) and meta-regression (D).
Meta-analysis of the association between LINC00511 expression and clinicopathological characteristics.
| Gender (male vs. female) | 4 | 0.80 (0.53 ~ 1.19) | 0.27 | 0.00% | Fixed |
| Age (old vs. young) | 9 | 0.67 (0.50 ~ 0.90) | 0.00% | Fixed | |
| Clinical stage (III–IV vs. I–II) | 4 | 2.55 (1.47 ~ 4.42) | 0.00% | Fixed | |
| Tumor size (large vs. small) | 8 | 3.29 (1.81 ~ 5.98) | 62.30% | Random | |
| Differentiation (poor vs. good) | 5 | 1.33 (0.90 ~ 1.96) | 0.156 | 0.00% | Fixed |
| Lymph node metastasis (yes vs. no) | 8 | 3.03 (1.77 ~ 5.20) | 52.40% | Random | |
| Metastasis (yes vs. no) | 4 | 1.47 (0.56 ~ 3.83) | 0.435 | 59.70% | Random |
Bold values indicate <0.05.
Figure 4The expression level and prognostic significance of LINC00511 analyzed by cancer public database. (A) LINC00511 expression profile across tumor samples and adjacent normal tissues from GEPIA (*P < 0.01). (B) Overall survival and disease-free survival plots of LINC00511, LIHC, STAD, GBMLGG, BRCA, CESC, KIRC, LIHC, LUAD, LUSC, PAAD were included in (n = 3383, Log-rank P < 0.001). (C) Disease-free survival plots of LINC00511, LIHC, STAD, GBMLGG, BRCA, CESC, KIRC, LIHC, LUAD, LUSC, PAAD were included in (n = 3383, Log-rank P < 0.001).
Figure 5Correlation analysis of LINC00511. (A) Top 10 enriched gene ontology of LINC00511. (B) Top 10 enriched functional pathways of LINC00511. (C) Dysregulated hallmarks of variation-ceRNA event. (D) Related ceRNA network of LINC00511 disturbed by variation.
Functional characterizations and molecular mechanisms of LINC00511 in the included studies.
| NSCLC | Cell proliferation, invasion, metastasis and apoptosis | - | EZH2 | p57 |
| BC | Cell proliferation, invasion, maintenance of cancer stem cells characteristic | miR-185-3p | - | E2F1, Nanog |
| PDA | Cell proliferation, invasion and tumor angiogenesis | miR-29b-3p | - | VEGFA |
| CcRCC | Cell proliferation, colony formation and metastasis | miR-625 | - | CCND1 |
| BC | Cell proliferation, apoptosis and radioresistance | miR-185 | - | STXBP4 |
| CC | Cell proliferation, invasion, metastasis and apoptosis | - | - | MRP1, P-GP, Bcl-2, MMP-2 and MMP-9 |
| HC | Cell proliferation, invasion and metastasis | miR-424 | - | - |
| CC | Cell proliferation, invasion and metastasis | - | - | - |
| BC | Cell proliferation and invasion | - | EZH2 | CDKN1B |
BC, breast cancer; CC, cervical cancer; ccRCC, clear cell renal cell carcinoma; HC, hepatocellular carcinoma; NSCLC, non-small cell lung cancer; PDA, pancreatic ductal adenocarcinoma.