Literature DB >> 3267215

Direct sequencing of enzymatically amplified human genomic DNA.

D R Engelke1, P A Hoener, F S Collins.   

Abstract

The polymerase chain reaction is a recently described technique that uses flanking oligonucleotide primers and repeated cycles of enzymatic primer extension to amplify a short segment of DNA by greater than 100,000-fold. By use of sequencing primers located internal to the amplification primers, direct genomic sequence was obtained from enzymatically amplified DNA by using the dideoxynucleotide chain-termination method. The method is relatively simple and offers significant advantages in identifying mutations in genes for which the normal sequence is known. Heterozygous and homozygous mutations in the human beta- and gamma-globin loci were unambiguously identified in 3 days with less than 1 microgram of genomic DNA.

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Year:  1988        PMID: 3267215      PMCID: PMC279587          DOI: 10.1073/pnas.85.2.544

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  22 in total

1.  Detection of single base substitutions in total genomic DNA.

Authors:  R M Myers; N Lumelsky; L S Lerman; T Maniatis
Journal:  Nature       Date:  1985 Feb 7-13       Impact factor: 49.962

Review 2.  The mutation and polymorphism of the human beta-globin gene and its surrounding DNA.

Authors:  S H Orkin; H H Kazazian
Journal:  Annu Rev Genet       Date:  1984       Impact factor: 16.830

3.  DNA analysis in the diagnosis of hemoglobin disorders.

Authors:  M Goossens; Y Y Kan
Journal:  Methods Enzymol       Date:  1981       Impact factor: 1.600

4.  Construction of a plasmid that overproduces the large proteolytic fragment (Klenow fragment) of DNA polymerase I of Escherichia coli.

Authors:  C M Joyce; N D Grindley
Journal:  Proc Natl Acad Sci U S A       Date:  1983-04       Impact factor: 11.205

5.  Genomic sequencing.

Authors:  G M Church; W Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  1984-04       Impact factor: 11.205

Review 6.  The molecular genetics of human hemoglobin.

Authors:  F S Collins; S M Weissman
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  1984

7.  Detection of single base substitutions by ribonuclease cleavage at mismatches in RNA:DNA duplexes.

Authors:  R M Myers; Z Larin; T Maniatis
Journal:  Science       Date:  1985-12-13       Impact factor: 47.728

8.  Detection of sickle cell beta S-globin allele by hybridization with synthetic oligonucleotides.

Authors:  B J Conner; A A Reyes; C Morin; K Itakura; R L Teplitz; R B Wallace
Journal:  Proc Natl Acad Sci U S A       Date:  1983-01       Impact factor: 11.205

9.  Characterization of beta-thalassaemia mutations using direct genomic sequencing of amplified single copy DNA.

Authors:  C Wong; C E Dowling; R K Saiki; R G Higuchi; H A Erlich; H H Kazazian
Journal:  Nature       Date:  1987 Nov 26-Dec 2       Impact factor: 49.962

10.  DNA sequencing with chain-terminating inhibitors.

Authors:  F Sanger; S Nicklen; A R Coulson
Journal:  Proc Natl Acad Sci U S A       Date:  1977-12       Impact factor: 11.205

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  36 in total

1.  Chromosomal footprinting of transcriptionally active and inactive oocyte-type 5S RNA genes of Xenopus laevis.

Authors:  D R Engelke; J M Gottesfeld
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

2.  Molecular phylogenetic inference from saber-toothed cat fossils of Rancho La Brea.

Authors:  D N Janczewski; N Yuhki; D A Gilbert; G T Jefferson; S J O'Brien
Journal:  Proc Natl Acad Sci U S A       Date:  1992-10-15       Impact factor: 11.205

3.  PCR amplification of tandemly repeated DNA: analysis of intra- and interchromosomal sequence variation and homologous unequal crossing-over in human alpha satellite DNA.

Authors:  P E Warburton; H F Willard
Journal:  Nucleic Acids Res       Date:  1992-11-25       Impact factor: 16.971

Review 4.  [Polymerase chain reaction: an overview].

Authors:  U Linz; H Degenhardt
Journal:  Naturwissenschaften       Date:  1990-11

5.  Amplification of bacterial 16S ribosomal DNA with polymerase chain reaction.

Authors:  K H Wilson; R B Blitchington; R C Greene
Journal:  J Clin Microbiol       Date:  1990-09       Impact factor: 5.948

6.  Coupled amplification and sequencing of genomic DNA.

Authors:  G Ruano; K K Kidd
Journal:  Proc Natl Acad Sci U S A       Date:  1991-04-01       Impact factor: 11.205

Review 7.  The molecular revolution--coming your way soon.

Authors:  P Quirke
Journal:  Gut       Date:  1992-01       Impact factor: 23.059

8.  Simplified method for confirmation of PCR products.

Authors:  M Kai; S Kamiya; S Sawamura; T Yamamoto; A Ozawa
Journal:  Nucleic Acids Res       Date:  1991-08-25       Impact factor: 16.971

9.  Identification of the mouse beta Fc gamma RII polymorphism by direct sequencing of amplified genomic DNA.

Authors:  M Lah; K Quelch; N J Deacon; I F McKenzie; P M Hogarth
Journal:  Immunogenetics       Date:  1990       Impact factor: 2.846

10.  Diagnosis of alpha 1-antitrypsin deficiency by enzymatic amplification of human genomic DNA and direct sequencing of polymerase chain reaction products.

Authors:  C R Newton; N Kalsheker; A Graham; S Powell; A Gammack; J Riley; A F Markham
Journal:  Nucleic Acids Res       Date:  1988-09-12       Impact factor: 16.971

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