Literature DB >> 32669426

Wide lag time distributions break a trade-off between reproduction and survival in bacteria.

Stefany Moreno-Gámez1,2,3, Daniel J Kiviet4,2, Clément Vulin4,2,5, Susan Schlegel4,2,6, Kim Schlegel4,2, G Sander van Doorn3, Martin Ackermann4,2.   

Abstract

Many microorganisms face a fundamental trade-off between reproduction and survival: Rapid growth boosts population size but makes microorganisms sensitive to external stressors. Here, we show that starved bacteria encountering new resources can break this trade-off by evolving phenotypic heterogeneity in lag time. We quantify the distribution of single-cell lag times of populations of starved Escherichia coli and show that population growth after starvation is primarily determined by the cells with shortest lag due to the exponential nature of bacterial population dynamics. As a consequence, cells with long lag times have no substantial effect on population growth resumption. However, we observe that these cells provide tolerance to stressors such as antibiotics. This allows an isogenic population to break the trade-off between reproduction and survival. We support this argument with an evolutionary model which shows that bacteria evolve wide lag time distributions when both rapid growth resumption and survival under stressful conditions are under selection. Our results can explain the prevalence of antibiotic tolerance by lag and demonstrate that the benefits of phenotypic heterogeneity in fluctuating environments are particularly high when minorities with extreme phenotypes dominate population dynamics.

Entities:  

Keywords:  antibiotic tolerance; life history trade-offs; phenotypic minorities; single-cell dynamics; starvation

Mesh:

Substances:

Year:  2020        PMID: 32669426      PMCID: PMC7414188          DOI: 10.1073/pnas.2003331117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  Connection between stochastic and deterministic modelling of microbial growth.

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Review 2.  Survival strategies of infectious biofilms.

Authors:  C A Fux; J W Costerton; P S Stewart; P Stoodley
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3.  Evidence that entry into sporulation in Bacillus subtilis is governed by a gradual increase in the level and activity of the master regulator Spo0A.

Authors:  Masaya Fujita; Richard Losick
Journal:  Genes Dev       Date:  2005-09-15       Impact factor: 11.361

4.  Conservation of the metabolomic response to starvation across two divergent microbes.

Authors:  Matthew J Brauer; Jie Yuan; Bryson D Bennett; Wenyun Lu; Elizabeth Kimball; David Botstein; Joshua D Rabinowitz
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-11       Impact factor: 11.205

Review 5.  The physiology of growth arrest: uniting molecular and environmental microbiology.

Authors:  Megan Bergkessel; David W Basta; Dianne K Newman
Journal:  Nat Rev Microbiol       Date:  2016-08-11       Impact factor: 60.633

Review 6.  The stationary phase of the bacterial life cycle.

Authors:  R Kolter; D A Siegele; A Tormo
Journal:  Annu Rev Microbiol       Date:  1993       Impact factor: 15.500

7.  Bet-hedging during bacterial diauxic shift.

Authors:  Ana Solopova; Jordi van Gestel; Franz J Weissing; Herwig Bachmann; Bas Teusink; Jan Kok; Oscar P Kuipers
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-05       Impact factor: 11.205

8.  Optimal resting-growth strategies of microbial populations in fluctuating environments.

Authors:  Nico Geisel; Jose M G Vilar; J Miguel Rubi
Journal:  PLoS One       Date:  2011-04-15       Impact factor: 3.240

9.  Different levels of catabolite repression optimize growth in stable and variable environments.

Authors:  Aaron M New; Bram Cerulus; Sander K Govers; Gemma Perez-Samper; Bo Zhu; Sarah Boogmans; Joao B Xavier; Kevin J Verstrepen
Journal:  PLoS Biol       Date:  2014-01-14       Impact factor: 8.029

10.  Trimmomatic: a flexible trimmer for Illumina sequence data.

Authors:  Anthony M Bolger; Marc Lohse; Bjoern Usadel
Journal:  Bioinformatics       Date:  2014-04-01       Impact factor: 6.937

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  14 in total

1.  Wide lag time distributions break a trade-off between reproduction and survival in bacteria.

Authors:  Stefany Moreno-Gámez; Daniel J Kiviet; Clément Vulin; Susan Schlegel; Kim Schlegel; G Sander van Doorn; Martin Ackermann
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-15       Impact factor: 11.205

2.  Mutant Strains of Escherichia coli and Methicillin-Resistant Staphylococcus aureus Obtained by Laboratory Selection To Survive on Metallic Copper Surfaces.

Authors:  Pauline Bleichert; Lucy Bütof; Christian Rückert; Martin Herzberg; Romeu Francisco; Paula V Morais; Gregor Grass; Jörn Kalinowski; Dietrich H Nies
Journal:  Appl Environ Microbiol       Date:  2020-12-17       Impact factor: 4.792

3.  Observation of universal ageing dynamics in antibiotic persistence.

Authors:  Yoav Kaplan; Shaked Reich; Elyaqim Oster; Shani Maoz; Irit Levin-Reisman; Irine Ronin; Orit Gefen; Oded Agam; Nathalie Q Balaban
Journal:  Nature       Date:  2021-11-17       Impact factor: 49.962

4.  Suboptimal resource allocation in changing environments constrains response and growth in bacteria.

Authors:  Rohan Balakrishnan; Roshali T de Silva; Terence Hwa; Jonas Cremer
Journal:  Mol Syst Biol       Date:  2021-12       Impact factor: 11.429

5.  Phenotypic-dependent variability and the emergence of tolerance in bacterial populations.

Authors:  José Camacho Mateu; Matteo Sireci; Miguel A Muñoz
Journal:  PLoS Comput Biol       Date:  2021-09-23       Impact factor: 4.475

6.  The cost of bacterial predation via type VI secretion system leads to predator extinction under environmental stress.

Authors:  Subhadeep Gupta; Soumyadipta Ray; Afruja Khan; Arkaprabha China; Dipjyoti Das; Amirul Islam Mallick
Journal:  iScience       Date:  2021-11-26

7.  Microbiota-derived metabolites inhibit Salmonella virulent subpopulation development by acting on single-cell behaviors.

Authors:  Alyson M Hockenberry; Gabriele Micali; Gabriella Takács; Jessica Weng; Wolf-Dietrich Hardt; Martin Ackermann
Journal:  Proc Natl Acad Sci U S A       Date:  2021-08-03       Impact factor: 11.205

8.  Gene expression noise can promote the fixation of beneficial mutations in fluctuating environments.

Authors:  Michael Schmutzer; Andreas Wagner
Journal:  PLoS Comput Biol       Date:  2020-10-26       Impact factor: 4.475

9.  Modeling host-associating microbes under selection.

Authors:  Florence Bansept; Nancy Obeng; Hinrich Schulenburg; Arne Traulsen
Journal:  ISME J       Date:  2021-06-22       Impact factor: 10.302

10.  Visualization and Quantification of Genetically Adapted Microbial Cells During Preculture.

Authors:  Hyun Ju Kim; Haeyoung Jeong; Sang Jun Lee
Journal:  Front Microbiol       Date:  2021-07-14       Impact factor: 5.640

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