| Literature DB >> 32656306 |
Ramesh Kumar1, Suman Nagpal2, Samander Kaushik3, Sanjay Mendiratta4.
Abstract
"SARS-CoV2", a previously unknown strain of coronaviruses caused a severe respiratory disease called Coronavirus disease (COVID-19) which emerged from Wuhan city of China on 30 December 2019, and declared as Global health problem by World Health Organisation within a month. In less than two and half months (11 March, 2020) it was declared as a pandemic disease due to its rapid spreading ability, it covered more than 211 countries infecting around 1.7 million persons and claiming around 1.1 lakhs lives within merely 100 days of its emergence. Containment of the infection of this virus is the only available measure to control the disease as no vaccine or specific antiviral treatment is available. Confirmed detection of the virus followed by isolation of the infected person at the earliest possible is the only measure to prevent this disease. Although there are number of methods available for detection of virus and to combat this disease in the present pandemic situation, but these available diagnostic methods have their own limitations. The speedy and exponential global spread of this disease strongly urges the fast and economic diagnostics tools. Additional to the available diagnostic methods, there is a sudden surge for development of various of methods and platforms to diagnose the COVID-19. The review summarized the advantage and disadvantage of various diagnostic approaches being used presently for COVID-19, newer detection methods in developmental stage and the feasibility of advanced platforms like newer nano-sensor based on-the-spot detection technologies. © Indian Virological Society 2020.Entities:
Keywords: Biosensor; COVID-19; Diagnostic method for COVID-19; RT-PCR; SARS-CoV2
Year: 2020 PMID: 32656306 PMCID: PMC7293170 DOI: 10.1007/s13337-020-00599-7
Source DB: PubMed Journal: Virusdisease ISSN: 2347-3584
Fig. 1Diagnosis Approaches for COVID- 19
Current Diagnosis method available for COVID-19
| Method available | Working principle | Advantage | Time required | Disadvantage |
|---|---|---|---|---|
| Next generation sequencing (NGS) | Whole genome sequencing | Highly sensitive and specific, Provide all related information; Can identify novel strain | 1–2 day | High expertise Equipment dependency and high cost Highly sophisticated Lab required |
| RT-PCR | Specific primer-probe based detection | Fast results Higher sensitivity Needs small amount of DNA Can be performed in a single step Well established methodology in viral diagnostics | 3–4 h | Higher costs due to the use of expensive consumables Expensive lab equipment Detection is also complex and time consuming |
| LAMP | More than two sets of specific primers pair based detection | Highly repeatable and accurate Single working temperature | 1 h | Too sensitive, highly prone to false positives due to carry-over or cross-contamination |
| Serological (traditional) | Antigen/Antibodies IgG/IgM | Sensitive and specific | 4–6 h | Testing come after 3-4 days of infection False positive |
| Rapid serological | Antigen/Antibodies IgG/IgM | POCT | 15–30 min | Testing come after 3-4 days of infection False positive |
| CT scan | Chest images | Enhance sensitivity of detection if findings combined with RT-PCR results | 1 h | Indistinguishability from other viral pneumonia and the hysteresis of abnormal CT |
| Virus isolation | In vitro live virus isolation and propagation | Highly (100%) specific Gold standard | 5–15 days | Low sensitivity as isolation is not 100% |