| Literature DB >> 32653042 |
Yoko Nagamori1, Ruth Hall Sedlak2, Andrew DeRosa3, Aleah Pullins3, Travis Cree3, Michael Loenser4, Benjamin S Larson5, Richard Boyd Smith5, Richard Goldstein4.
Abstract
BACKGROUND: Fecal examination is an important component of routine companion animal wellness exams. Sensitivity and specificity of fecal examinations, however, are influenced by sample preparation methodologies and the level of training and experience of personnel who read fecal slides. The VETSCAN IMAGYST system consists of three components: a sample preparation device, a commercially available scanner, and an analysis software. The VETSCAN IMAGYST automated scanner and cloud-based, deep learning algorithm, locates, classifies, and identifies parasite eggs found on fecal microscopic slides. The main study objectives were (i) to qualitatively evaluate the capabilities of the VETSCAN IMAGYST screening system and (ii) to assess and compare the performance of the VETSCAN IMAGYST fecal preparation methods to conventional fecal flotation techniques.Entities:
Keywords: Artificial intelligence; Deep learning; Fecal egg identification; Veterinary parasitology diagnostic
Mesh:
Year: 2020 PMID: 32653042 PMCID: PMC7353785 DOI: 10.1186/s13071-020-04215-x
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 3.876
Fig. 1VETSCAN IMAGYST fecal flotation uses a simple, proprietary sample preparation method to create slides for digitization and automatic uploading to the cloud for analysis by deep learning algorithms for common intestinal parasite eggs
Fig. 2Summary of VETSCAN IMAGYST centrifugal flotation and passive flotation sample preparation methods
Fig. 3Scatter plot of VETSCAN IMAGYST centrifugal flotation method (a) and VETSCAN IMAGYST passive flotation method (b) read by a parasitologist (x-axis) versus read by the VETSCAN IMAGYST algorithm (y-axis)
Pearson’s correlation coefficient of VETSCAN IMAGYST centrifugal flotation method and VETSCAN IMAGYST passive flotation method read by a parasitologist versus read by the VETSCAN IMAGYST algorithm
| Taeniidae | ||||
|---|---|---|---|---|
| Centrifugal flotation | 0.90 | 0.83 | 0.86 | 0.98 |
| Passive flotation | 0.95 | 0.97 | 0.84 | 0.99 |
Fig. 4VETSCAN IMAGYST images of individual fecal parasite eggs. Each column presents a representative image of each taxon
Diagnostic sensitivity and specificity comparison of samples prepared with VETSCAN IMAGYST passive flotation versus OVASSAY passive flotation (reference method), both read by a parasitologist
| Taeniidae | ||||
|---|---|---|---|---|
| True positive | 40 | 22 | 21 | 4 |
| False positive | 4 | 6 | 0 | 6 |
| True negative | 53 | 67 | 78 | 90 |
| False negative | 3 | 5 | 1 | 0 |
| Total | 100 | 100 | 100 | 100 |
| Sensitivity (%) (95% CI) | 93.0 (82.5–98.0) | 81.5 (64.1–92.6) | 95.5 (80.7–99.5) | 100 (55.5–100) |
| Specificity (%) (95% CI) | 93.0 (84.2–97.6) | 91.8 (83.8–96.5) | 100 (96.8–100) | 93.8 (87.6–97.3) |
Diagnostic sensitivity and specificity comparison of samples prepared with VETSCAN IMAGYST centrifugal flotation versus conventional centrifugal flotation (reference method), both read by a parasitologist
| Taeniidae | ||||
|---|---|---|---|---|
| True positive | 42 | 25 | 20 | 10 |
| False positive | 2 | 3 | 1 | 0 |
| True negative | 53 | 64 | 76 | 88 |
| False negative | 3 | 8 | 3 | 2 |
| Total | 100 | 100 | 100 | 100 |
| Sensitivity (%) (95% CI) | 93.3 (83.3–98.1) | 75.8 (59.4–87.8) | 87.0 (69.1–96.2) | 83.3 (56.4–96.4) |
| Specificity (%) (95% CI) | 96.4 (88.8–99.2) | 95.5 (88.5–98.7) | 98.7 (94.1–99.9) | 100 (97.2–100) |
Abbreviation: CI, confidence interval
Diagnostic sensitivity and specificity comparison of samples prepared with conventional centrifugal flotation versus OVASSAY passive flotation, both read by a parasitologist
| Taeniidae | ||||
|---|---|---|---|---|
| True positive | 41 | 26 | 22 | 4 |
| False positive | 2 | 1 | 0 | 0 |
| True negative | 53 | 66 | 77 | 88 |
| False negative | 4 | 7 | 1 | 8 |
| Total | 100 | 100 | 100 | 100 |
| Sensitivity (%) (95% CI) | 91.1 (80.2–96.9) | 78.8 (62.8–90.0) | 95.7 (81.4–99.5) | 33.3 (12.5–61.2) |
| Specificity (%) (95% CI) | 96.4 (88.8–99.2) | 98.5 (93.2–99.8) | 100 (96.8–100) | 100 (97.2–100) |
Abbreviation: CI, confidence interval
Time-to-result of the full VETSCAN IMAGYST system including sample preparation, slide scan, and image analysis
| Passive flotation | Centrifugal flotation | |
|---|---|---|
| Scan time | 6.6 min ± 37 s ( | 6.8 min ± 49 s ( |
| Total time to resulta | 14 min ± 73 s ( | 10.3 min ± 65 s ( |
aPreparation, scan and analysis