Literature DB >> 32651916

Optogenetic Control of Gene Expression Using Cryptochrome 2 and a Light-Activated Degron.

Carmen N Hernández-Candia1, Chandra L Tucker2.   

Abstract

Optogenetic tools allow for use of light as an external input to control cellular processes. When applied to regulate the function of transcription factors, optogenetic approaches provide a tunable, reversible, and bidirectional method to control gene expression. Herein, we present a detailed method to induce gene expression in mammalian cells using the light dependent dimerization of cryptochrome 2 (CRY2) and CIB1 to complement a split transcription factor. We also describe a protocol to disrupt gene expression with light by fusing a dimeric transcription factor to CRY2. When combined with a light-induced degron attached to the gene product, this method allows for rapid modulation of target protein abundance.

Entities:  

Keywords:  CRY2; Degron; Light; Optogenetics; Transcription

Mesh:

Substances:

Year:  2020        PMID: 32651916      PMCID: PMC7891899          DOI: 10.1007/978-1-0716-0755-8_10

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  11 in total

1.  Tight control of gene expression in mammalian cells by tetracycline-responsive promoters.

Authors:  M Gossen; H Bujard
Journal:  Proc Natl Acad Sci U S A       Date:  1992-06-15       Impact factor: 11.205

2.  Evolution of a split RNA polymerase as a versatile biosensor platform.

Authors:  Jinyue Pu; Julia Zinkus-Boltz; Bryan C Dickinson
Journal:  Nat Chem Biol       Date:  2017-02-13       Impact factor: 15.040

3.  A split-Cas9 architecture for inducible genome editing and transcription modulation.

Authors:  Bernd Zetsche; Sara E Volz; Feng Zhang
Journal:  Nat Biotechnol       Date:  2015-02       Impact factor: 54.908

4.  A humanized system for pharmacologic control of gene expression.

Authors:  V M Rivera; T Clackson; S Natesan; R Pollock; J F Amara; T Keenan; S R Magari; T Phillips; N L Courage; F Cerasoli; D A Holt; M Gilman
Journal:  Nat Med       Date:  1996-09       Impact factor: 53.440

5.  Regulation of Cre recombinase by ligand-induced complementation of inactive fragments.

Authors:  Nicolas Jullien; François Sampieri; Alain Enjalbert; Jean-Paul Herman
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

6.  Light-mediated control of DNA transcription in yeast.

Authors:  Robert M Hughes; Steven Bolger; Hersh Tapadia; Chandra L Tucker
Journal:  Methods       Date:  2012-08-15       Impact factor: 3.608

7.  Transcriptional activation by tetracyclines in mammalian cells.

Authors:  M Gossen; S Freundlieb; G Bender; G Müller; W Hillen; H Bujard
Journal:  Science       Date:  1995-06-23       Impact factor: 47.728

8.  General method for regulating protein stability with light.

Authors:  Kimberly M Bonger; Rishi Rakhit; Alexander Y Payumo; James K Chen; Thomas J Wandless
Journal:  ACS Chem Biol       Date:  2013-11-08       Impact factor: 5.100

9.  Rapid blue-light-mediated induction of protein interactions in living cells.

Authors:  Matthew J Kennedy; Robert M Hughes; Leslie A Peteya; Joel W Schwartz; Michael D Ehlers; Chandra L Tucker
Journal:  Nat Methods       Date:  2010-10-31       Impact factor: 28.547

10.  Bidirectional approaches for optogenetic regulation of gene expression in mammalian cells using Arabidopsis cryptochrome 2.

Authors:  Gopal P Pathak; Jessica I Spiltoir; Camilla Höglund; Lauren R Polstein; Sari Heine-Koskinen; Charles A Gersbach; Jari Rossi; Chandra L Tucker
Journal:  Nucleic Acids Res       Date:  2017-11-16       Impact factor: 16.971

View more
  1 in total

1.  A light way for nuclear cell biologists.

Authors:  Giada Forlani; Barbara Di Ventura
Journal:  J Biochem       Date:  2021-04-18       Impact factor: 3.387

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.