Literature DB >> 32651277

Human TRIM5α senses and restricts LINE-1 elements.

Bianca Volkmann1, Sabine Wittmann1, Justine Lagisquet1, Janina Deutschmann1, Kristin Eissmann1, James J Ross1, Brigitte Biesinger1, Thomas Gramberg2.   

Abstract

Mobile genetic elements have significantly shaped our genomic landscape. LINE-1 retroelements are the only autonomously active elements left in the human genome. Since new insertions can have detrimental consequences, cells need to efficiently control LINE-1 retrotransposition. Here, we demonstrate that the intrinsic immune factor TRIM5α senses and restricts LINE-1 retroelements. Previously, rhesus TRIM5α has been shown to efficiently block HIV-1 replication, while human TRIM5α was found to be less active. Surprisingly, we found that both human and rhesus TRIM5α efficiently repress human LINE-1 retrotransposition. TRIM5α interacts with LINE-1 ribonucleoprotein complexes in the cytoplasm, which is essential for restriction. In line with its postulated role as pattern recognition receptor, we show that TRIM5α also induces innate immune signaling upon interaction with LINE-1 ribonucleoprotein complexes. The signaling events activate the transcription factors AP-1 and NF-κB, leading to the down-regulation of LINE-1 promoter activity. Together, our findings identify LINE-1 as important target of human TRIM5α, which restricts and senses LINE-1 via two distinct mechanisms. Our results corroborate TRIM5α as pattern recognition receptor and shed light on its previously undescribed activity against mobile genetic elements, such as LINE-1, to protect the integrity of our genome.

Entities:  

Keywords:  LINE-1; TRIM5α; innate immune sensing; restriction factor; retrotransposon

Mesh:

Substances:

Year:  2020        PMID: 32651277      PMCID: PMC7395565          DOI: 10.1073/pnas.1922366117

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  57 in total

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Authors:  Dustin C Hancks; Haig H Kazazian
Journal:  Curr Opin Genet Dev       Date:  2012-03-08       Impact factor: 5.578

2.  Hexagonal assembly of a restricting TRIM5alpha protein.

Authors:  Barbie K Ganser-Pornillos; Viswanathan Chandrasekaran; Owen Pornillos; Joseph G Sodroski; Wesley I Sundquist; Mark Yeager
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-27       Impact factor: 11.205

3.  Ribonucleoprotein particles with LINE-1 RNA in mouse embryonal carcinoma cells.

Authors:  S L Martin
Journal:  Mol Cell Biol       Date:  1991-09       Impact factor: 4.272

4.  Qualification of embryonal carcinoma 2102Ep as a reference for human embryonic stem cell research.

Authors:  Richard Josephson; Carol J Ording; Ying Liu; Soojung Shin; Uma Lakshmipathy; Araz Toumadje; Bradley Love; Jonathan D Chesnut; Peter W Andrews; Mahendra S Rao; Jonathan M Auerbach
Journal:  Stem Cells       Date:  2007-02       Impact factor: 6.277

5.  Human LINE retrotransposons generate processed pseudogenes.

Authors:  C Esnault; J Maestre; T Heidmann
Journal:  Nat Genet       Date:  2000-04       Impact factor: 38.330

6.  Primate-specific ORF0 contributes to retrotransposon-mediated diversity.

Authors:  Ahmet M Denli; Iñigo Narvaiza; Bilal E Kerman; Monique Pena; Christopher Benner; Maria C N Marchetto; Jolene K Diedrich; Aaron Aslanian; Jiao Ma; James J Moresco; Lynne Moore; Tony Hunter; Alan Saghatelian; Fred H Gage
Journal:  Cell       Date:  2015-10-22       Impact factor: 41.582

7.  L1 retrotransposition in human neural progenitor cells.

Authors:  Nicole G Coufal; José L Garcia-Perez; Grace E Peng; Gene W Yeo; Yangling Mu; Michael T Lovci; Maria Morell; K Sue O'Shea; John V Moran; Fred H Gage
Journal:  Nature       Date:  2009-08-05       Impact factor: 49.962

8.  The non-autonomous retrotransposon SVA is trans-mobilized by the human LINE-1 protein machinery.

Authors:  Julija Raiz; Annette Damert; Sergiu Chira; Ulrike Held; Sabine Klawitter; Matthias Hamdorf; Johannes Löwer; Wolf H Strätling; Roswitha Löwer; Gerald G Schumann
Journal:  Nucleic Acids Res       Date:  2011-11-03       Impact factor: 16.971

9.  Human LINE-1 retrotransposition requires a metastable coiled coil and a positively charged N-terminus in L1ORF1p.

Authors:  Elena Khazina; Oliver Weichenrieder
Journal:  Elife       Date:  2018-03-22       Impact factor: 8.140

10.  Primate TRIM5 proteins form hexagonal nets on HIV-1 capsids.

Authors:  Yen-Li Li; Viswanathan Chandrasekaran; Stephen D Carter; Cora L Woodward; Devin E Christensen; Kelly A Dryden; Owen Pornillos; Mark Yeager; Barbie K Ganser-Pornillos; Grant J Jensen; Wesley I Sundquist
Journal:  Elife       Date:  2016-06-02       Impact factor: 8.140

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  11 in total

1.  Recurrent evolution of an inhibitor of ESCRT-dependent virus budding and LINE-1 retrotransposition in primates.

Authors:  Lara Rheinemann; Diane Miller Downhour; Kristen A Davenport; Alesia N McKeown; Wesley I Sundquist; Nels C Elde
Journal:  Curr Biol       Date:  2022-03-03       Impact factor: 10.834

2.  Genetic Associations and Differential mRNA Expression Levels of Host Genes Suggest a Viral Trigger for Endemic Pemphigus Foliaceus.

Authors:  Valéria Bumiller-Bini Hoch; Ana Flávia Kohler; Danillo G Augusto; Sara Cristina Lobo-Alves; Danielle Malheiros; Gabriel Adelman Cipolla; Angelica Beate Winter Boldt; Karin Braun-Prado; Michael Wittig; Andre Franke; Claudia Pföhler; Margitta Worm; Nina van Beek; Matthias Goebeler; Miklós Sárdy; Saleh Ibrahim; Hauke Busch; Enno Schmidt; Jennifer Elisabeth Hundt; Patrícia Savio de Araujo-Souza; Maria Luiza Petzl-Erler
Journal:  Viruses       Date:  2022-04-23       Impact factor: 5.818

Review 3.  Recognize Yourself-Innate Sensing of Non-LTR Retrotransposons.

Authors:  Justine Lagisquet; Kilian Zuber; Thomas Gramberg
Journal:  Viruses       Date:  2021-01-12       Impact factor: 5.048

4.  SARS-CoV-2 infection mediates differential expression of human endogenous retroviruses and long interspersed nuclear elements.

Authors:  Jez L Marston; Matthew Greenig; Manvendra Singh; Matthew L Bendall; Rodrigo R R Duarte; Cédric Feschotte; Luis P Iñiguez; Douglas F Nixon
Journal:  JCI Insight       Date:  2021-12-22

Review 5.  Factors Regulating the Activity of LINE1 Retrotransposons.

Authors:  Maria Sergeevna Protasova; Tatiana Vladimirovna Andreeva; Evgeny Ivanovich Rogaev
Journal:  Genes (Basel)       Date:  2021-09-30       Impact factor: 4.096

6.  Interactomic analysis reveals a homeostatic role for the HIV restriction factor TRIM5α in mitophagy.

Authors:  Bhaskar Saha; Michelle Salemi; Geneva L Williams; Seeun Oh; Michael L Paffett; Brett Phinney; Michael A Mandell
Journal:  Cell Rep       Date:  2022-05-10       Impact factor: 9.995

7.  RNA sensor MDA5 suppresses LINE-1 retrotransposition by regulating the promoter activity of LINE-1 5'-UTR.

Authors:  Jiaxiu Yan; Yifei Zhao; Juan Du; Yu Wang; Shaohua Wang; Qing Wang; Xu Zhao; Wei Xu; Ke Zhao
Journal:  Mob DNA       Date:  2022-04-12

Review 8.  Role of Transposable Elements in Genome Stability: Implications for Health and Disease.

Authors:  Audesh Bhat; Trupti Ghatage; Sonali Bhan; Ganesh P Lahane; Arti Dhar; Rakesh Kumar; Raj K Pandita; Krishna M Bhat; Kenneth S Ramos; Tej K Pandita
Journal:  Int J Mol Sci       Date:  2022-07-15       Impact factor: 6.208

Review 9.  From Capsids to Complexes: Expanding the Role of TRIM5α in the Restriction of Divergent RNA Viruses and Elements.

Authors:  Kevin M Rose; Stephanie J Spada; Rebecca Broeckel; Kristin L McNally; Vanessa M Hirsch; Sonja M Best; Fadila Bouamr
Journal:  Viruses       Date:  2021-03-10       Impact factor: 5.048

Review 10.  The Interplay Among HIV, LINE-1, and the Interferon Signaling System.

Authors:  Xu Zhao; Yifei Zhao; Juan Du; Pujun Gao; Ke Zhao
Journal:  Front Immunol       Date:  2021-09-09       Impact factor: 7.561

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