Literature DB >> 19657334

L1 retrotransposition in human neural progenitor cells.

Nicole G Coufal1, José L Garcia-Perez, Grace E Peng, Gene W Yeo, Yangling Mu, Michael T Lovci, Maria Morell, K Sue O'Shea, John V Moran, Fred H Gage.   

Abstract

Long interspersed element 1 (LINE-1 or L1) retrotransposons have markedly affected the human genome. L1s must retrotranspose in the germ line or during early development to ensure their evolutionary success, yet the extent to which this process affects somatic cells is poorly understood. We previously demonstrated that engineered human L1s can retrotranspose in adult rat hippocampus progenitor cells in vitro and in the mouse brain in vivo. Here we demonstrate that neural progenitor cells isolated from human fetal brain and derived from human embryonic stem cells support the retrotransposition of engineered human L1s in vitro. Furthermore, we developed a quantitative multiplex polymerase chain reaction that detected an increase in the copy number of endogenous L1s in the hippocampus, and in several regions of adult human brains, when compared to the copy number of endogenous L1s in heart or liver genomic DNAs from the same donor. These data suggest that de novo L1 retrotransposition events may occur in the human brain and, in principle, have the potential to contribute to individual somatic mosaicism.

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Year:  2009        PMID: 19657334      PMCID: PMC2909034          DOI: 10.1038/nature08248

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  27 in total

1.  Direct isolation of human central nervous system stem cells.

Authors:  N Uchida; D W Buck; D He; M J Reitsma; M Masek; T V Phan; A S Tsukamoto; F H Gage; I L Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-19       Impact factor: 11.205

2.  Members of the SRY family regulate the human LINE retrotransposons.

Authors:  T Tchénio; J F Casella; T Heidmann
Journal:  Nucleic Acids Res       Date:  2000-01-15       Impact factor: 16.971

3.  Determination of L1 retrotransposition kinetics in cultured cells.

Authors:  E M Ostertag; E T Prak; R J DeBerardinis; J V Moran; H H Kazazian
Journal:  Nucleic Acids Res       Date:  2000-03-15       Impact factor: 16.971

4.  Total regional and global number of synapses in the human brain neocortex.

Authors:  Y Tang; J R Nyengaard; D M De Groot; H J Gundersen
Journal:  Synapse       Date:  2001-09-01       Impact factor: 2.562

5.  DNA repair mediated by endonuclease-independent LINE-1 retrotransposition.

Authors:  Tammy A Morrish; Nicolas Gilbert; Jeremy S Myers; Bethaney J Vincent; Thomas D Stamato; Guillermo E Taccioli; Mark A Batzer; John V Moran
Journal:  Nat Genet       Date:  2002-05-13       Impact factor: 38.330

Review 6.  Mammalian neural stem cells.

Authors:  F H Gage
Journal:  Science       Date:  2000-02-25       Impact factor: 47.728

7.  In vitro differentiation of transplantable neural precursors from human embryonic stem cells.

Authors:  S C Zhang; M Wernig; I D Duncan; O Brüstle; J A Thomson
Journal:  Nat Biotechnol       Date:  2001-12       Impact factor: 54.908

8.  Methyl-CpG-binding protein 2 represses LINE-1 expression and retrotransposition but not Alu transcription.

Authors:  F Yu; N Zingler; G Schumann; W H Strätling
Journal:  Nucleic Acids Res       Date:  2001-11-01       Impact factor: 16.971

9.  Human l1 retrotransposition is associated with genetic instability in vivo.

Authors:  David E Symer; Carla Connelly; Suzanne T Szak; Emerita M Caputo; Gregory J Cost; Giovanni Parmigiani; Jef D Boeke
Journal:  Cell       Date:  2002-08-09       Impact factor: 41.582

10.  A comprehensive analysis of recently integrated human Ta L1 elements.

Authors:  Jeremy S Myers; Bethaney J Vincent; Hunt Udall; W Scott Watkins; Tammy A Morrish; Gail E Kilroy; Gary D Swergold; Jurgen Henke; Lotte Henke; John V Moran; Lynn B Jorde; Mark A Batzer
Journal:  Am J Hum Genet       Date:  2002-06-17       Impact factor: 11.025

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  387 in total

Review 1.  Neurodegeneration the RNA way.

Authors:  Abigail J Renoux; Peter K Todd
Journal:  Prog Neurobiol       Date:  2011-11-03       Impact factor: 11.685

Review 2.  Active human retrotransposons: variation and disease.

Authors:  Dustin C Hancks; Haig H Kazazian
Journal:  Curr Opin Genet Dev       Date:  2012-03-08       Impact factor: 5.578

3.  Single-cell analysis: The deepest differences.

Authors:  Charlotte Schubert
Journal:  Nature       Date:  2011-11-30       Impact factor: 49.962

4.  Microarray analysis of copy number variation in single cells.

Authors:  Peter Konings; Evelyne Vanneste; Sigrun Jackmaert; Michèle Ampe; Geert Verbeke; Yves Moreau; Joris Robert Vermeesch; Thierry Voet
Journal:  Nat Protoc       Date:  2012-01-19       Impact factor: 13.491

5.  Similarities between long interspersed element-1 (LINE-1) reverse transcriptase and telomerase.

Authors:  Huira C Kopera; John B Moldovan; Tammy A Morrish; Jose Luis Garcia-Perez; John V Moran
Journal:  Proc Natl Acad Sci U S A       Date:  2011-09-22       Impact factor: 11.205

6.  Reprogramming somatic cells into iPS cells activates LINE-1 retroelement mobility.

Authors:  Silke Wissing; Martin Muñoz-Lopez; Angela Macia; Zhiyuan Yang; Mauricio Montano; William Collins; Jose Luis Garcia-Perez; John V Moran; Warner C Greene
Journal:  Hum Mol Genet       Date:  2011-10-11       Impact factor: 6.150

7.  Retrofitting the genome: L1 extinction follows endogenous retroviral expansion in a group of muroid rodents.

Authors:  Issac K Erickson; Michael A Cantrell; LuAnn Scott; Holly A Wichman
Journal:  J Virol       Date:  2011-09-28       Impact factor: 5.103

Review 8.  Seeing beyond the average cell: branching process models of cell proliferation, differentiation, and death during mouse brain development.

Authors:  Hugh R MacMillan; Michael J McConnell
Journal:  Theory Biosci       Date:  2010-09-08       Impact factor: 1.919

Review 9.  Post-transcriptional regulation of LINE-1 retrotransposition by AID/APOBEC and ADAR deaminases.

Authors:  Elisa Orecchini; Loredana Frassinelli; Silvia Galardi; Silvia Anna Ciafrè; Alessandro Michienzi
Journal:  Chromosome Res       Date:  2018-02-02       Impact factor: 5.239

Review 10.  The rise of regulatory RNA.

Authors:  Kevin V Morris; John S Mattick
Journal:  Nat Rev Genet       Date:  2014-04-29       Impact factor: 53.242

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