Literature DB >> 23808589

Crystal structure of a human prion protein fragment reveals a motif for oligomer formation.

Marcin I Apostol1, Kay Perry, Witold K Surewicz.   

Abstract

The structural transition of the prion protein from α-helical- to β-sheet-rich underlies its conversion into infectious and disease-associated isoforms. Here we describe the crystal structure of a fragment from human prion protein consisting of the disulfide-bond-linked portions of helices 2 and 3. Instead of forming a pair-of-sheets steric zipper structure characteristic of amyloid fibers, this fragment crystallized into a β-sheet-rich assembly of hexameric oligomers. This study reveals a never before observed structural motif for ordered protein aggregates and suggests a possible mechanism for self-propagation of misfolded conformations by such nonamyloid oligomers.

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Year:  2013        PMID: 23808589      PMCID: PMC3766960          DOI: 10.1021/ja403001q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  28 in total

1.  Atomic structures of amyloid cross-beta spines reveal varied steric zippers.

Authors:  Michael R Sawaya; Shilpa Sambashivan; Rebecca Nelson; Magdalena I Ivanova; Stuart A Sievers; Marcin I Apostol; Michael J Thompson; Melinda Balbirnie; Jed J W Wiltzius; Heather T McFarlane; Anders Ø Madsen; Christian Riekel; David Eisenberg
Journal:  Nature       Date:  2007-04-29       Impact factor: 49.962

2.  Molecular basis for insulin fibril assembly.

Authors:  Magdalena I Ivanova; Stuart A Sievers; Michael R Sawaya; Joseph S Wall; David Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-28       Impact factor: 11.205

Review 3.  The beta-prism: a new folding motif.

Authors:  T Shimizu; K Morikawa
Journal:  Trends Biochem Sci       Date:  1996-01       Impact factor: 13.807

4.  The most infectious prion protein particles.

Authors:  Jay R Silveira; Gregory J Raymond; Andrew G Hughson; Richard E Race; Valerie L Sim; Stanley F Hayes; Byron Caughey
Journal:  Nature       Date:  2005-09-08       Impact factor: 49.962

Review 5.  Soluble protein oligomers in neurodegeneration: lessons from the Alzheimer's amyloid beta-peptide.

Authors:  Christian Haass; Dennis J Selkoe
Journal:  Nat Rev Mol Cell Biol       Date:  2007-02       Impact factor: 94.444

6.  Beta-sheet core of human prion protein amyloid fibrils as determined by hydrogen/deuterium exchange.

Authors:  Xiaojun Lu; Patrick L Wintrode; Witold K Surewicz
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-22       Impact factor: 11.205

Review 7.  Seeding "one-dimensional crystallization" of amyloid: a pathogenic mechanism in Alzheimer's disease and scrapie?

Authors:  J T Jarrett; P T Lansbury
Journal:  Cell       Date:  1993-06-18       Impact factor: 41.582

8.  Molecular architecture of human prion protein amyloid: a parallel, in-register beta-structure.

Authors:  Nathan J Cobb; Frank D Sönnichsen; Hassane McHaourab; Witold K Surewicz
Journal:  Proc Natl Acad Sci U S A       Date:  2007-11-19       Impact factor: 11.205

9.  Atomic structure of the cross-beta spine of islet amyloid polypeptide (amylin).

Authors:  Jed J W Wiltzius; Stuart A Sievers; Michael R Sawaya; Duilio Cascio; Dmitriy Popov; Christian Riekel; David Eisenberg
Journal:  Protein Sci       Date:  2008-06-12       Impact factor: 6.725

10.  Molecular mechanisms for protein-encoded inheritance.

Authors:  Jed J W Wiltzius; Meytal Landau; Rebecca Nelson; Michael R Sawaya; Marcin I Apostol; Lukasz Goldschmidt; Angela B Soriaga; Duilio Cascio; Kanagalaghatta Rajashankar; David Eisenberg
Journal:  Nat Struct Mol Biol       Date:  2009-08-16       Impact factor: 15.369

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  22 in total

1.  Controlling the Oligomerization State of Aβ-Derived Peptides with Light.

Authors:  Patrick J Salveson; Sepehr Haerianardakani; Alexander Thuy-Boun; Adam G Kreutzer; James S Nowick
Journal:  J Am Chem Soc       Date:  2018-04-20       Impact factor: 15.419

Review 2.  Elucidating the Structures of Amyloid Oligomers with Macrocyclic β-Hairpin Peptides: Insights into Alzheimer's Disease and Other Amyloid Diseases.

Authors:  Adam G Kreutzer; James S Nowick
Journal:  Acc Chem Res       Date:  2018-03-06       Impact factor: 22.384

3.  Theory of amyloid fibril nucleation from folded proteins.

Authors:  Lingyun Zhang; Jeremy D Schmit
Journal:  Isr J Chem       Date:  2017-01-30       Impact factor: 3.333

4.  X-ray Crystallography Reveals Parallel and Antiparallel β-Sheet Dimers of a β-Hairpin Derived from Aβ16-36 that Assemble to Form Different Tetramers.

Authors:  Adam G Kreutzer; Tuan D Samdin; Gretchen Guaglianone; Ryan K Spencer; James S Nowick
Journal:  ACS Chem Neurosci       Date:  2020-07-14       Impact factor: 4.418

5.  X-ray Crystallographic Structures of Oligomers of Peptides Derived from β2-Microglobulin.

Authors:  Ryan K Spencer; Adam G Kreutzer; Patrick J Salveson; Hao Li; James S Nowick
Journal:  J Am Chem Soc       Date:  2015-05-12       Impact factor: 15.419

6.  Structures of oligomers of a peptide from β-amyloid.

Authors:  Johnny D Pham; Nicholas Chim; Celia W Goulding; James S Nowick
Journal:  J Am Chem Soc       Date:  2013-08-08       Impact factor: 15.419

7.  Amyloid β-Protein C-Terminal Fragments: Formation of Cylindrins and β-Barrels.

Authors:  Thanh D Do; Nichole E LaPointe; Rebecca Nelson; Pascal Krotee; Eric Y Hayden; Brittany Ulrich; Sarah Quan; Stuart C Feinstein; David B Teplow; David Eisenberg; Joan-Emma Shea; Michael T Bowers
Journal:  J Am Chem Soc       Date:  2016-01-06       Impact factor: 15.419

8.  Structural mapping of oligomeric intermediates in an amyloid assembly pathway.

Authors:  Theodoros K Karamanos; Matthew P Jackson; Antonio N Calabrese; Sophia C Goodchild; Emma E Cawood; Gary S Thompson; Arnout P Kalverda; Eric W Hewitt; Sheena E Radford
Journal:  Elife       Date:  2019-09-25       Impact factor: 8.140

Review 9.  Exploring amyloid oligomers with peptide model systems.

Authors:  Tuan D Samdin; Adam G Kreutzer; James S Nowick
Journal:  Curr Opin Chem Biol       Date:  2021-07-03       Impact factor: 8.972

10.  Polymorphism of oligomers of a peptide from β-amyloid.

Authors:  Johnny D Pham; Borries Demeler; James S Nowick
Journal:  J Am Chem Soc       Date:  2014-03-26       Impact factor: 15.419

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