Literature DB >> 32576626

The MD Anderson Prostate Cancer Patient-derived Xenograft Series (MDA PCa PDX) Captures the Molecular Landscape of Prostate Cancer and Facilitates Marker-driven Therapy Development.

Nallasivam Palanisamy1,2, Jun Yang3, Peter D A Shepherd3, Elsa M Li-Ning-Tapia3, Estefania Labanca3, Ganiraju C Manyam4, Murali K Ravoori5, Vikas Kundra5,6, John C Araujo3, Eleni Efstathiou3, Louis L Pisters7, Xinhai Wan3, Xuemei Wang8, Elba S Vazquez9, Ana M Aparicio3, Shannon L Carskadon1,2, Scott A Tomlins2, Lakshmi P Kunju2, Arul M Chinnaiyan2, Bradley M Broom4, Christopher J Logothetis3, Patricia Troncoso10, Nora M Navone11.   

Abstract

PURPOSE: Advances in prostate cancer lag behind other tumor types partly due to the paucity of models reflecting key milestones in prostate cancer progression. Therefore, we develop clinically relevant prostate cancer models. EXPERIMENTAL
DESIGN: Since 1996, we have generated clinically annotated patient-derived xenografts (PDXs; the MDA PCa PDX series) linked to specific phenotypes reflecting all aspects of clinical prostate cancer.
RESULTS: We studied two cell line-derived xenografts and the first 80 PDXs derived from 47 human prostate cancer donors. Of these, 47 PDXs derived from 22 donors are working models and can be expanded either as cell lines (MDA PCa 2a and 2b) or PDXs. The histopathologic, genomic, and molecular characteristics (androgen receptor, ERG, and PTEN loss) maintain fidelity with the human tumor and correlate with published findings. PDX growth response to mouse castration and targeted therapy illustrate their clinical utility. Comparative genomic hybridization and sequencing show significant differences in oncogenic pathways in pairs of PDXs derived from different areas of the same tumor. We also identified a recurrent focal deletion in an area that includes the speckle-type POZ protein-like (SPOPL) gene in PDXs derived from seven human donors of 28 studied (25%). SPOPL is a SPOP paralog, and SPOP mutations define a molecular subclass of prostate cancer. SPOPL deletions are found in 7% of The Cancer Genome Atlas prostate cancers, which suggests that our cohort is a reliable platform for targeted drug development.
CONCLUSIONS: The MDA PCa PDX series is a dynamic resource that captures the molecular landscape of prostate cancers progressing under novel treatments and enables optimization of prostate cancer-specific, marker-driven therapy. ©2020 American Association for Cancer Research.

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Year:  2020        PMID: 32576626      PMCID: PMC7501166          DOI: 10.1158/1078-0432.CCR-20-0479

Source DB:  PubMed          Journal:  Clin Cancer Res        ISSN: 1078-0432            Impact factor:   12.531


  39 in total

1.  Integrative analysis of complex cancer genomics and clinical profiles using the cBioPortal.

Authors:  Jianjiong Gao; Bülent Arman Aksoy; Ugur Dogrusoz; Gideon Dresdner; Benjamin Gross; S Onur Sumer; Yichao Sun; Anders Jacobsen; Rileen Sinha; Erik Larsson; Ethan Cerami; Chris Sander; Nikolaus Schultz
Journal:  Sci Signal       Date:  2013-04-02       Impact factor: 8.192

2.  Prospective Genomic Profiling of Prostate Cancer Across Disease States Reveals Germline and Somatic Alterations That May Affect Clinical Decision Making.

Authors:  Wassim Abida; Joshua Armenia; Anuradha Gopalan; Ryan Brennan; Michael Walsh; David Barron; Daniel Danila; Dana Rathkopf; Michael Morris; Susan Slovin; Brigit McLaughlin; Kristen Curtis; David M Hyman; Jeremy C Durack; Stephen B Solomon; Maria E Arcila; Ahmet Zehir; Aijazuddin Syed; Jianjiong Gao; Debyani Chakravarty; Hebert Alberto Vargas; Mark E Robson; Vijai Joseph; Kenneth Offit; Mark T A Donoghue; Adam A Abeshouse; Ritika Kundra; Zachary J Heins; Alexander V Penson; Christopher Harris; Barry S Taylor; Marc Ladanyi; Diana Mandelker; Liying Zhang; Victor E Reuter; Philip W Kantoff; David B Solit; Michael F Berger; Charles L Sawyers; Nikolaus Schultz; Howard I Scher
Journal:  JCO Precis Oncol       Date:  2017-05-31

3.  Modeling a lethal prostate cancer variant with small-cell carcinoma features.

Authors:  Vassiliki Tzelepi; Jiexin Zhang; Jing-Fang Lu; Brittany Kleb; Guanglin Wu; Xinhai Wan; Anh Hoang; Eleni Efstathiou; Kanishka Sircar; Nora M Navone; Patricia Troncoso; Shoudan Liang; Christopher J Logothetis; Sankar N Maity; Ana M Aparicio
Journal:  Clin Cancer Res       Date:  2011-12-12       Impact factor: 12.531

4.  Neuroendocrine prostate cancer xenografts with large-cell and small-cell features derived from a single patient's tumor: morphological, immunohistochemical, and gene expression profiles.

Authors:  Nora M Navone; Sankar N Maity; Ana Aparicio; Vasiliki Tzelepi; John C Araujo; Charles C Guo; Shoudan Liang; Patricia Troncoso; Christopher J Logothetis
Journal:  Prostate       Date:  2010-11-17       Impact factor: 4.104

5.  PRUNE2 is a human prostate cancer suppressor regulated by the intronic long noncoding RNA PCA3.

Authors:  Ahmad Salameh; Alessandro K Lee; Marina Cardó-Vila; Diana N Nunes; Eleni Efstathiou; Fernanda I Staquicini; Andrey S Dobroff; Serena Marchiò; Nora M Navone; Hitomi Hosoya; Richard C Lauer; Sijin Wen; Carolina C Salmeron; Anh Hoang; Irene Newsham; Leandro A Lima; Dirce M Carraro; Salvatore Oliviero; Mikhail G Kolonin; Richard L Sidman; Kim-Anh Do; Patricia Troncoso; Christopher J Logothetis; Ricardo R Brentani; George A Calin; Webster K Cavenee; Emmanuel Dias-Neto; Renata Pasqualini; Wadih Arap
Journal:  Proc Natl Acad Sci U S A       Date:  2015-06-15       Impact factor: 11.205

6.  Androgen receptor-negative human prostate cancer cells induce osteogenesis in mice through FGF9-mediated mechanisms.

Authors:  Zhi Gang Li; Paul Mathew; Jun Yang; Michael W Starbuck; Amado J Zurita; Jie Liu; Charles Sikes; Asha S Multani; Eleni Efstathiou; Adriana Lopez; Jing Wang; Tina V Fanning; Victor G Prieto; Vikas Kundra; Elba S Vazquez; Patricia Troncoso; Austin K Raymond; Christopher J Logothetis; Sue-Hwa Lin; Sankar Maity; Nora M Navone
Journal:  J Clin Invest       Date:  2008-08       Impact factor: 14.808

7.  Establishment of two human prostate cancer cell lines derived from a single bone metastasis.

Authors:  N M Navone; M Olive; M Ozen; R Davis; P Troncoso; S M Tu; D Johnston; A Pollack; S Pathak; A C von Eschenbach; C J Logothetis
Journal:  Clin Cancer Res       Date:  1997-12       Impact factor: 12.531

8.  The mutational landscape of lethal castration-resistant prostate cancer.

Authors:  Catherine S Grasso; Yi-Mi Wu; Dan R Robinson; Xuhong Cao; Saravana M Dhanasekaran; Amjad P Khan; Michael J Quist; Xiaojun Jing; Robert J Lonigro; J Chad Brenner; Irfan A Asangani; Bushra Ateeq; Sang Y Chun; Javed Siddiqui; Lee Sam; Matt Anstett; Rohit Mehra; John R Prensner; Nallasivam Palanisamy; Gregory A Ryslik; Fabio Vandin; Benjamin J Raphael; Lakshmi P Kunju; Daniel R Rhodes; Kenneth J Pienta; Arul M Chinnaiyan; Scott A Tomlins
Journal:  Nature       Date:  2012-07-12       Impact factor: 49.962

9.  Divergent clonal evolution of castration-resistant neuroendocrine prostate cancer.

Authors:  Himisha Beltran; Davide Prandi; Juan Miguel Mosquera; Matteo Benelli; Loredana Puca; Joanna Cyrta; Clarisse Marotz; Eugenia Giannopoulou; Balabhadrapatruni V S K Chakravarthi; Sooryanarayana Varambally; Scott A Tomlins; David M Nanus; Scott T Tagawa; Eliezer M Van Allen; Olivier Elemento; Andrea Sboner; Levi A Garraway; Mark A Rubin; Francesca Demichelis
Journal:  Nat Med       Date:  2016-02-08       Impact factor: 53.440

10.  Genomic correlates of clinical outcome in advanced prostate cancer.

Authors:  Wassim Abida; Joanna Cyrta; Glenn Heller; Davide Prandi; Joshua Armenia; Ilsa Coleman; Marcin Cieslik; Matteo Benelli; Dan Robinson; Eliezer M Van Allen; Andrea Sboner; Tarcisio Fedrizzi; Juan Miguel Mosquera; Brian D Robinson; Navonil De Sarkar; Lakshmi P Kunju; Scott Tomlins; Yi Mi Wu; Daniel Nava Rodrigues; Massimo Loda; Anuradha Gopalan; Victor E Reuter; Colin C Pritchard; Joaquin Mateo; Diletta Bianchini; Susana Miranda; Suzanne Carreira; Pasquale Rescigno; Julie Filipenko; Jacob Vinson; Robert B Montgomery; Himisha Beltran; Elisabeth I Heath; Howard I Scher; Philip W Kantoff; Mary-Ellen Taplin; Nikolaus Schultz; Johann S deBono; Francesca Demichelis; Peter S Nelson; Mark A Rubin; Arul M Chinnaiyan; Charles L Sawyers
Journal:  Proc Natl Acad Sci U S A       Date:  2019-05-06       Impact factor: 11.205

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  15 in total

1.  Phenotypic characterization of two novel cell line models of castration-resistant prostate cancer.

Authors:  Michael C Haffner; Akshay Bhamidipati; Harrison K Tsai; David M Esopi; Ajay M Vaghasia; Jin-Yih Low; Radhika A Patel; Gunes Guner; Minh-Tam Pham; Nicole Castagna; Jessica Hicks; Nicolas Wyhs; Ruedi Aebersold; Angelo M De Marzo; William G Nelson; Tiannan Guo; Srinivasan Yegnasubramanian
Journal:  Prostate       Date:  2021-08-16       Impact factor: 4.104

2.  Characterization of prostate cancer adrenal metastases: dependence upon androgen receptor signaling and steroid hormones.

Authors:  Minas J Sakellakis; Andrew W Hahn; Sumankalai Ramachandran; Miao Zhang; Anh Hoang; Jian H Song; Jingjing Liu; Feng Wang; Hirak S Basu; Peter Sheperd; Xuemei Wang; Daniel E Frigo; Sue-Hwa Lin; Theocharis Panaretakis; Jianhua Zhang; Nora Navone; Patricia Troncoso; Christopher J Logothetis; Mark A Titus
Journal:  Prostate Cancer Prostatic Dis       Date:  2022-09-13       Impact factor: 5.455

3.  Enhancing 223Ra Treatment Efficacy by Anti-β1 Integrin Targeting.

Authors:  Claudia Paindelli; Stefano Casarin; Feng Wang; Luis Diaz-Gomez; Jianhua Zhang; Antonios G Mikos; Christopher J Logothetis; Peter Friedl; Eleonora Dondossola
Journal:  J Nucl Med       Date:  2021-10-28       Impact factor: 11.082

4.  The MURAL collection of prostate cancer patient-derived xenografts enables discovery through preclinical models of uro-oncology.

Authors:  Gail P Risbridger; Ashlee K Clark; Laura H Porter; Mitchell G Lawrence; Renea A Taylor; Roxanne Toivanen; Andrew Bakshi; Natalie L Lister; David Pook; Carmel J Pezaro; Shahneen Sandhu; Shivakumar Keerthikumar; Rosalia Quezada Urban; Melissa Papargiris; Jenna Kraska; Heather B Madsen; Hong Wang; Michelle G Richards; Birunthi Niranjan; Samantha O'Dea; Linda Teng; William Wheelahan; Zhuoer Li; Nicholas Choo; John F Ouyang; Heather Thorne; Lisa Devereux; Rodney J Hicks; Shomik Sengupta; Laurence Harewood; Mahesh Iddawala; Arun A Azad; Jeremy Goad; Jeremy Grummet; John Kourambas; Edmond M Kwan; Daniel Moon; Declan G Murphy; John Pedersen; David Clouston; Sam Norden; Andrew Ryan; Luc Furic; David L Goode; Mark Frydenberg
Journal:  Nat Commun       Date:  2021-08-19       Impact factor: 14.919

5.  Patient-derived xenografts and organoids model therapy response in prostate cancer.

Authors:  Sofia Karkampouna; Federico La Manna; Andrej Benjak; Mirjam Kiener; Marta De Menna; Eugenio Zoni; Joël Grosjean; Irena Klima; Andrea Garofoli; Marco Bolis; Arianna Vallerga; Jean-Philippe Theurillat; Maria R De Filippo; Vera Genitsch; David Keller; Tijmen H Booij; Christian U Stirnimann; Kenneth Eng; Andrea Sboner; Charlotte K Y Ng; Salvatore Piscuoglio; Peter C Gray; Martin Spahn; Mark A Rubin; George N Thalmann; Marianna Kruithof-de Julio
Journal:  Nat Commun       Date:  2021-02-18       Impact factor: 14.919

Review 6.  Androgen-Driven Fusion Genes and Chimeric Transcripts in Prostate Cancer.

Authors:  Mauro Scaravilli; Sonja Koivukoski; Leena Latonen
Journal:  Front Cell Dev Biol       Date:  2021-02-09

7.  Targeting SWI/SNF ATPases in enhancer-addicted prostate cancer.

Authors:  Lanbo Xiao; Abhijit Parolia; Yuanyuan Qiao; Pushpinder Bawa; Sanjana Eyunni; Rahul Mannan; Sandra E Carson; Yu Chang; Xiaoju Wang; Yuping Zhang; Josh N Vo; Steven Kregel; Stephanie A Simko; Andrew D Delekta; Mustapha Jaber; Heng Zheng; Ingrid J Apel; Lisa McMurry; Fengyun Su; Rui Wang; Sylvia Zelenka-Wang; Sanjita Sasmal; Leena Khare; Subhendu Mukherjee; Chandrasekhar Abbineni; Kiran Aithal; Mital S Bhakta; Jay Ghurye; Xuhong Cao; Nora M Navone; Alexey I Nesvizhskii; Rohit Mehra; Ulka Vaishampayan; Marco Blanchette; Yuzhuo Wang; Susanta Samajdar; Murali Ramachandra; Arul M Chinnaiyan
Journal:  Nature       Date:  2021-12-22       Impact factor: 69.504

8.  Autophagy Inhibition by Targeting PIKfyve Potentiates Response to Immune Checkpoint Blockade in Prostate Cancer.

Authors:  Yuanyuan Qiao; Jae Eun Choi; Jean C Tien; Stephanie A Simko; Thekkelnaycke Rajendiran; Josh N Vo; Andrew D Delekta; Lisha Wang; Lanbo Xiao; Nathan B Hodge; Parth Desai; Sergio Mendoza; Kristin Juckette; Alice Xu; Tanu Soni; Fengyun Su; Rui Wang; Xuhong Cao; Jiali Yu; Ilona Kryczek; Xiao-Ming Wang; Xiaoju Wang; Javed Siddiqui; Zhen Wang; Amélie Bernard; Ester Fernandez-Salas; Nora M Navone; Stephanie J Ellison; Ke Ding; Eeva-Liisa Eskelinen; Elisabeth I Heath; Daniel J Klionsky; Weiping Zou; Arul M Chinnaiyan
Journal:  Nat Cancer       Date:  2021-08-02

Review 9.  Personalized Medicine for Prostate Cancer: Is Targeting Metabolism a Reality?

Authors:  Gio Fidelito; Matthew J Watt; Renea A Taylor
Journal:  Front Oncol       Date:  2022-01-21       Impact factor: 6.244

10.  Prostate cancer castrate resistant progression usage of non-canonical androgen receptor signaling and ketone body fuel.

Authors:  Juan Bizzotto; Pablo Sanchis; Nicolas Anselmino; Estefania Labanca; Jun Yang; Peter D A Shepherd; Alejandra Paez; Valeria Antico-Arciuch; Sofia Lage-Vickers; Anh G Hoang; Ximing Tang; Maria Gabriela Raso; Mark Titus; Eleni Efstathiou; Javier Cotignola; John Araujo; Christopher Logothetis; Elba Vazquez; Nora Navone; Geraldine Gueron
Journal:  Oncogene       Date:  2021-09-28       Impact factor: 9.867

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