| Literature DB >> 32571431 |
Jiaying Zhu1,2, Qi Li1, Xiaoxia Li3, Jianbang Kang3, Yan Song3, Junli Song3, Donghong Yin3, Jinju Duan4.
Abstract
BACKGROUND: Carbapenem-resistant Klebsiella pneumoniae (CRKP) is considered as a serious global threat. CRKPs occurred only sporadically in the Second Hospital of Shanxi Medical University. Our study aimed to investigate and control the first outbreak of CRKP in our hospital occurred between October 2017 and August 2019.Entities:
Keywords: Carbapenem-resistant Klebsiella pneumoniae; Infection control; KPC; NDM; Phenotypic detection; Transmission
Mesh:
Substances:
Year: 2020 PMID: 32571431 PMCID: PMC7310137 DOI: 10.1186/s13756-020-00757-y
Source DB: PubMed Journal: Antimicrob Resist Infect Control ISSN: 2047-2994 Impact factor: 4.887
Fig. 1Timeline of events during the outbreak of carbapenemase-resistant K. pneumoniae. Dates are given as month. LOS1: Length of stay until first detection; LOS2: Length of stay after first detection; K: KPC; N: NDM; K&N: KPC and NDM; −: no-KPC and no-NDM
Epidemiological and clinical data of the 31 patients infected with CRKP during the outbreak
| Carbapenemase | |||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ID | Sex | Age(y) | APACHE II | Department when infection | Clinic samples | Outcome | CIM | eCIM | MLST | KPC | NDM | Other | ESBL | AmpC | mcr-1 |
| P01 | F | 56 | 14 | Hematology | Blood | Death | I | – | ST147 | – | – | – | + | – | – |
| P02 | M | 62 | 32 | ICU | Respiratory secretions | Discharge | + | + | ST1 | – | NDM-1 | – | – | – | – |
| P03 | F | 78 | 12 | ICU | Respiratory secretions | Death | + | + | ST11 | KPC-2 | NDM-1 | – | – | – | – |
| P04 | M | 88 | 20 | ICU | Respiratory secretions | Death | + | + | ST11 | – | – | – | – | – | – |
| P05 | M | 52 | 26 | Respiratory | Respiratory secretions | Discharge | + | + | ST11 | – | NDM-1 | – | – | – | – |
| P06 | M | 48 | 20 | ICU | Respiratory secretions | Death | + | + | ST11 | – | – | – | – | – | – |
| P07 | M | 40 | 26 | ICU | Respiratory secretions | Death | + | + | ST11 | – | NDM-1 | – | – | – | – |
| P08 | M | 54 | 20 | Respiratory | Respiratory secretions | Death | + | + | ST11 | – | NDM-1 | – | – | – | – |
| P09 | M | 54 | 26 | ICU | Respiratory secretions | Death | + | + | ST11 | – | – | – | – | – | – |
| P10 | F | 85 | 14 | Gastroenterology | Secretions | Discharge | + | + | ST11 | – | NDM-1 | – | – | – | – |
| P11 | M | 56 | 25 | ICU | Respiratory secretions | Discharge | + | – | ST11 | KPC-2 | – | – | + | + | – |
| P12 | M | 76 | 24 | Neurosurgery | Cerebrospinal fluid | Death | + | + | ST11 | – | NDM-1 | – | – | – | – |
| P13 | M | 44 | 5 | General Surgery | Pus | Discharge | + | + | ST11 | – | – | – | – | – | – |
| P14 | M | 30 | 6 | Hematology | Respiratory secretions | Death | – | – | ST15 | – | – | – | – | – | – |
| P15 | M | 90 | 15 | Cardiothoracic Surgery | Blood | Discharge | + | + | ST11 | – | – | – | – | – | – |
| P16 | M | 62 | 10 | Hematology | Respiratory secretions | Discharge | + | + | ST3744 | – | NDM-1 | – | – | – | – |
| P17 | M | 66 | 13 | Nephrology | Respiratory secretions | Discharge | + | + | ST11 | – | NDM-1 | – | – | – | – |
| P18 | M | 62 | 8 | Rheumatology | Blood | Discharge | + | + | ST11 | – | – | – | – | – | – |
| P19 | F | 71 | 7 | Respiratory | Respiratory secretions | Discharge | + | + | ST11 | – | NDM-1 | – | – | – | – |
| P20 | M | 42 | 7 | ICU | Blood | Discharge | + | + | ST11 | – | NDM-1 | – | – | – | – |
| P21 | M | 57 | 9 | Hematology | Respiratory secretions | Discharge | + | + | * | – | NDM-1 | – | + | – | – |
| P22 | M | 70 | 29 | Neurosurgery | Respiratory secretions | Death | + | – | ST11 | KPC-2 | – | – | + | – | – |
| P23 | F | 44 | 18 | Hematology | Blood | Discharge | + | + | ST690 | – | NDM-1 | – | – | – | – |
| P24 | F | 76 | 11 | Neurosurgery | Cerebrospinal fluid | Discharge | + | – | ST11 | KPC-2 | – | – | + | – | – |
| P25 | M | 45 | 10 | ICU | Blood | Discharge | + | + | ST11 | – | NDM-1 | – | – | – | – |
| P26 | F | 38 | 5 | Orthopedics | Respiratory secretions | Discharge | + | + | ST11 | – | NDM-1 | – | – | – | – |
| P27 | M | 95 | 16 | Respiratory | Respiratory secretions | Discharge | + | + | ST784 | – | – | – | – | – | – |
| P28 | F | 68 | 18 | Hematology | Blood | Discharge | – | – | ST7 | – | – | – | – | – | – |
| P29 | F | 85 | 7 | ICU | Secretions | Death | + | + | ST524 | – | – | – | – | – | – |
| P30 | M | 67 | 22 | Neurosurgery | Cerebrospinal fluid | Discharge | + | – | ST307 | KPC-2 | – | – | – | – | – |
| P31 | M | 76 | 3 | Neurosurgery | Cerebrospinal fluid | Discharge | + | – | ST11 | KPC-2 | – | – | + | – | – |
APACHE II Acute Physiology and Chronic Health Evaluation II, ST sequence type, ICU intensive care unit, mCIM modified carbapenem inactivation method, eCIM EDTA-modified carbapenem inactivation method, MLST multilocus sequence typing, ESBLs extended spectrum β-lactamases; *: data not publish; —: negative
Fig. 2Epidemiological links between CRKP patients (n = 31 cases). Nodes represent cases (1–31) and color represent department when infection. Arrows indicate epidemiological link between cases, directly (patients in the same ward) or indirectly (share common room, environmental source or via undetected intermediate patient)
Fig. 3Phylogeny by the seven MLST gene sequences of 31 strains. Patient numbers are shown on the right. The refined maximum likelihood phylogeny constructed by MEGA7. ST: sequence type