Literature DB >> 32560807

Chemiluminescent sensors for quantitation of the bacterial second messenger cyclic di-GMP.

Wyatt A Anderson1, Andrew B Dippel1, Michael M Maiden2, Christopher M Waters2, Ming C Hammond3.   

Abstract

Chemiluminescent biosensors have been developed and broadly applied to mammalian cell systems for studying intracellular signaling networks. For bacteria, biosensors have largely relied on fluorescence-based systems for quantitating signaling molecules, but these designs can encounter issues in complex environments due to their reliance on external illumination. In order to circumvent these issues, we designed the first ratiometric chemiluminescent biosensors for studying a key bacterial second messenger, cyclic di-GMP. We have shown recently that these biosensors function both in vitro and in vivo for detecting changes in cyclic di-GMP levels. In this chapter, we present a practical and broadly applicable method for high-throughput quantitation of cyclic di-GMP in bacterial cell extracts using the high affinity biosensor tVYN-TmΔ that could serve as the "Bradford assay" equivalent for this bacterial signaling molecule.
© 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Bioluminescence; Cell extracts; Ratiometric biosensor; Vibrio cholerae

Mesh:

Substances:

Year:  2020        PMID: 32560807      PMCID: PMC8238376          DOI: 10.1016/bs.mie.2020.04.004

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.682


  15 in total

1.  A liquid chromatography-coupled tandem mass spectrometry method for quantitation of cyclic di-guanosine monophosphate.

Authors:  Christian Spangler; Alex Böhm; Urs Jenal; Roland Seifert; Volkhard Kaever
Journal:  J Microbiol Methods       Date:  2010-04-10       Impact factor: 2.363

2.  Bile acids and bicarbonate inversely regulate intracellular cyclic di-GMP in Vibrio cholerae.

Authors:  Benjamin J Koestler; Christopher M Waters
Journal:  Infect Immun       Date:  2014-05-05       Impact factor: 3.441

3.  Exploring environmental control of cyclic di-GMP signaling in Vibrio cholerae by using the ex vivo lysate cyclic di-GMP assay (TELCA).

Authors:  Benjamin J Koestler; Christopher M Waters
Journal:  Appl Environ Microbiol       Date:  2013-06-21       Impact factor: 4.792

4.  Cyclic-di-GMP regulation promotes survival of a slow-replicating subpopulation of intracellular Salmonella Typhimurium.

Authors:  Erik Petersen; Erez Mills; Samuel I Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2019-03-12       Impact factor: 11.205

Review 5.  Cyclic di-GMP: the first 25 years of a universal bacterial second messenger.

Authors:  Ute Römling; Michael Y Galperin; Mark Gomelsky
Journal:  Microbiol Mol Biol Rev       Date:  2013-03       Impact factor: 11.056

6.  Visualizing the perturbation of cellular cyclic di-GMP levels in bacterial cells.

Authors:  Chun Loong Ho; Kavin Shi Jie Chong; Jamila Akosua Oppong; Mary Lay Cheng Chuah; Suet Mien Tan; Zhao-Xun Liang
Journal:  J Am Chem Soc       Date:  2013-01-08       Impact factor: 15.419

7.  Gauging and Visualizing c-di-GMP Levels in Pseudomonas aeruginosa Using Fluorescence-Based Biosensors.

Authors:  Morten Rybtke; Song Lin Chua; Joey Kuok Hoong Yam; Michael Givskov; Liang Yang; Tim Tolker-Nielsen
Journal:  Methods Mol Biol       Date:  2017

8.  In Vivo Biochemistry: Single-Cell Dynamics of Cyclic Di-GMP in Escherichia coli in Response to Zinc Overload.

Authors:  Jongchan Yeo; Andrew B Dippel; Xin C Wang; Ming C Hammond
Journal:  Biochemistry       Date:  2017-11-02       Impact factor: 3.162

9.  Next-generation RNA-based fluorescent biosensors enable anaerobic detection of cyclic di-GMP.

Authors:  Xin C Wang; Stephen C Wilson; Ming C Hammond
Journal:  Nucleic Acids Res       Date:  2016-07-05       Impact factor: 16.971

10.  Quorum sensing controls biofilm formation in Vibrio cholerae through modulation of cyclic di-GMP levels and repression of vpsT.

Authors:  Christopher M Waters; Wenyun Lu; Joshua D Rabinowitz; Bonnie L Bassler
Journal:  J Bacteriol       Date:  2008-01-25       Impact factor: 3.490

View more
  1 in total

Review 1.  Analyzing signaling activity and function in hematopoietic cells.

Authors:  Tobias Kull; Timm Schroeder
Journal:  J Exp Med       Date:  2021-06-15       Impact factor: 14.307

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.