Literature DB >> 20385176

A liquid chromatography-coupled tandem mass spectrometry method for quantitation of cyclic di-guanosine monophosphate.

Christian Spangler1, Alex Böhm, Urs Jenal, Roland Seifert, Volkhard Kaever.   

Abstract

Cyclic di-guanosine monophosphate (c-di-GMP) represents an important ubiquitous second messenger in bacteria. It controls the transition between a sessile and a motile lifestyle of bacteria and, hence, affects the formation of biofilms which are highly resistant to antimicrobial treatment. c-di-GMP is synthesized by di-guanylate cyclases (DGCs) and degraded by specific phosphodiesterases (PDEs), two highly abundant protein families in bacteria. We have established a robust and highly sensitive high performance liquid chromatography-coupled tandem mass spectrometry (HPLC-MS/MS) based method for the quantitation of c-di-GMP and investigated various method performance parameters such as limit of detection (LOD), lower limit of quantitation (LLOQ), linearity, accuracy, recovery and analyte stability. As a proof of principle we used this method to accurately measure the activity of the prototype DGC PleD* from Caulobacter crescentus in vitro. In addition the methodology was successfully applied to determine in vivo levels of c-di-GMP in bacterial extracts of E. coli at different stages of bacterial growth. This demonstrates that our method is suitable for the sensitive and specific quantitation of c-di-GMP in bacterial cell extracts. 2010 Elsevier B.V. All rights reserved.

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Year:  2010        PMID: 20385176     DOI: 10.1016/j.mimet.2010.03.020

Source DB:  PubMed          Journal:  J Microbiol Methods        ISSN: 0167-7012            Impact factor:   2.363


  80 in total

1.  GEMM-I riboswitches from Geobacter sense the bacterial second messenger cyclic AMP-GMP.

Authors:  Colleen A Kellenberger; Stephen C Wilson; Scott F Hickey; Tania L Gonzalez; Yichi Su; Zachary F Hallberg; Thomas F Brewer; Anthony T Iavarone; Hans K Carlson; Yu-Fang Hsieh; Ming C Hammond
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

2.  Parallel evolutionary paths to produce more than one Pseudomonas aeruginosa biofilm phenotype.

Authors:  Janne G Thöming; Jürgen Tomasch; Matthias Preusse; Michal Koska; Nora Grahl; Sarah Pohl; Sven D Willger; Volkhard Kaever; Mathias Müsken; Susanne Häussler
Journal:  NPJ Biofilms Microbiomes       Date:  2020-01-10       Impact factor: 7.290

3.  Regulation of a muralytic enzyme-encoding gene by two non-coding RNAs.

Authors:  Renée J St-Onge; Marie A Elliot
Journal:  RNA Biol       Date:  2017-11-03       Impact factor: 4.652

4.  Construction of Boolean logic gates based on dual-vector circuits of multiple gene regulatory elements.

Authors:  Zhao Wei; Wenliang Fu; Qing Liu; Haoran Jing; Chen Jin; Yao Chen; Wenrong Xia; Xiaoming Zhu; Donggang Xu
Journal:  Mol Genet Genomics       Date:  2018-10-29       Impact factor: 3.291

5.  Evidence for Escherichia coli Diguanylate Cyclase DgcZ Interlinking Surface Sensing and Adhesion via Multiple Regulatory Routes.

Authors:  Egidio Lacanna; Colette Bigosch; Volkhard Kaever; Alex Boehm; Anke Becker
Journal:  J Bacteriol       Date:  2016-08-25       Impact factor: 3.490

6.  Quorum sensing and silencing in Vibrio parahaemolyticus.

Authors:  Cindy J Gode-Potratz; Linda L McCarter
Journal:  J Bacteriol       Date:  2011-06-24       Impact factor: 3.490

7.  Cyclic Di-GMP Regulates Multiple Cellular Functions in the Symbiotic Alphaproteobacterium Sinorhizobium meliloti.

Authors:  Simon Schäper; Elizaveta Krol; Dorota Skotnicka; Volkhard Kaever; Rolf Hilker; Lotte Søgaard-Andersen; Anke Becker
Journal:  J Bacteriol       Date:  2015-11-16       Impact factor: 3.490

Review 8.  Cyclic di-GMP: the first 25 years of a universal bacterial second messenger.

Authors:  Ute Römling; Michael Y Galperin; Mark Gomelsky
Journal:  Microbiol Mol Biol Rev       Date:  2013-03       Impact factor: 11.056

9.  Influence of 3-Chloroaniline on the Biofilm Lifestyle of Comamonas testosteroni and Its Implications on Bioaugmentation.

Authors:  Yichao Wu; Anee Mohanty; Wu Siang Chia; Bin Cao
Journal:  Appl Environ Microbiol       Date:  2016-06-30       Impact factor: 4.792

10.  Engineering of Bacillus subtilis strains to allow rapid characterization of heterologous diguanylate cyclases and phosphodiesterases.

Authors:  Xiaohui Gao; Xiao Dong; Sundharraman Subramanian; Paige M Matthews; Caleb A Cooper; Daniel B Kearns; Charles E Dann
Journal:  Appl Environ Microbiol       Date:  2014-08-01       Impact factor: 4.792

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