Literature DB >> 32559119

Multiple information carried by RNAs: total eclipse or a light at the end of the tunnel?

Baptiste Bogard1, Claire Francastel1, Florent Hubé1.   

Abstract

The findings that an RNA is not necessarily either coding or non-coding, or that a precursor RNA can produce different types of mature RNAs, whether coding or non-coding, long or short, have challenged the dichotomous view of the RNA world almost 15 years ago. Since then, and despite an increasing number of studies, the diversity of information that can be conveyed by RNAs is rarely searched for, and when it is known, it remains largely overlooked in further functional studies. Here, we provide an update with prominent examples of multiple functions that are carried by the same RNA or are produced by the same precursor RNA, to emphasize their biological relevance in most living organisms. An important consequence is that the overall function of their locus of origin results from the balance between various RNA species with distinct functions and fates. The consideration of the molecular basis of this multiplicity of information is obviously crucial for downstream functional studies when the targeted functional molecule is often not the one that is believed.

Keywords:  Bifunctional RNA; circRNA; dual function RNA; non-coding RNA; protein-coding; small ORF; splicing

Year:  2020        PMID: 32559119      PMCID: PMC7714488          DOI: 10.1080/15476286.2020.1783868

Source DB:  PubMed          Journal:  RNA Biol        ISSN: 1547-6286            Impact factor:   4.652


  146 in total

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Review 2.  Regulation of circRNA biogenesis.

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5.  An architectural role for a nuclear noncoding RNA: NEAT1 RNA is essential for the structure of paraspeckles.

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Journal:  Biochimie       Date:  2011-06-02       Impact factor: 4.079

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Review 8.  Modifications and functional genomics of human transfer RNA.

Authors:  Tao Pan
Journal:  Cell Res       Date:  2018-02-20       Impact factor: 25.617

9.  tRNA fragments (tRFs) guide Ago to regulate gene expression post-transcriptionally in a Dicer-independent manner.

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Journal:  RNA       Date:  2018-05-29       Impact factor: 4.942

10.  mirtronDB: a mirtron knowledge base.

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  2 in total

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2.  At elevated temperatures, heat shock protein genes show altered ratios of different RNAs and expression of new RNAs, including several novel HSPB1 mRNAs encoding HSP27 protein isoforms.

Authors:  Xia Gao; Keyin Zhang; Haiyan Zhou; Lucas Zellmer; Chengfu Yuan; Hai Huang; Dezhong Joshua Liao
Journal:  Exp Ther Med       Date:  2021-06-24       Impact factor: 2.447

  2 in total

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