Literature DB >> 32524429

NEURO-LEARN: a Solution for Collaborative Pattern Analysis of Neuroimaging Data.

Bingye Lei1,2,3, Fengchun Wu2,4, Jing Zhou1,2, Dongsheng Xiong1,2, Kaixi Wang1, Lingyin Kong1, Pengfei Ke1, Jun Chen5,6, Yuping Ning2,4, Xiaobo Li2,7, Zhiming Xiang5,8, Kai Wu9,10,11,12,13,14,15.   

Abstract

The development of neuroimaging instrumentation has boosted neuroscience researches. Consequently, both the fineness and the cost of data acquisition have profoundly increased, leading to the main bottleneck of this field: limited sample size and high dimensionality of neuroimaging data. Therefore, the emphasis of ideas of data pooling and research collaboration has increased over the past decade. Collaborative analysis techniques emerge as the idea developed. In this paper, we present NEURO-LEARN, a solution for collaborative pattern analysis of neuroimaging data. Its collaboration scheme consists of four parts: projects, data, analysis, and reports. While data preparation workflows defined in projects reduce the high dimensionality of neuroimaging data by collaborative computation, pooling of derived data and sharing of pattern analysis workflows along with generated reports on the Web enlarge the sample size and ensure the reliability and reproducibility of pattern analysis. Incorporating this scheme, NEURO-LEARN provides an easy-to-use Web application that allows users from different sites to share projects and processed data, perform pattern analysis, and obtain result reports. We anticipate that this solution will help neuroscientists to enlarge sample size, conquer the curse of dimensionality and conduct reproducible studies on neuroimaging data with efficiency and validity.

Keywords:  Collaboration; Machine learning; Neuroimaging; Pattern analysis

Mesh:

Year:  2021        PMID: 32524429     DOI: 10.1007/s12021-020-09468-6

Source DB:  PubMed          Journal:  Neuroinformatics        ISSN: 1539-2791


  21 in total

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  3 in total

1.  Discriminative Analysis of Schizophrenia Patients Using Topological Properties of Structural and Functional Brain Networks: A Multimodal Magnetic Resonance Imaging Study.

Authors:  Jing Wang; Pengfei Ke; Jinyu Zang; Fengchun Wu; Kai Wu
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2.  An integrated machine learning framework for a discriminative analysis of schizophrenia using multi-biological data.

Authors:  Peng-Fei Ke; Dong-Sheng Xiong; Jia-Hui Li; Zhi-Lin Pan; Jing Zhou; Shi-Jia Li; Jie Song; Xiao-Yi Chen; Gui-Xiang Li; Jun Chen; Xiao-Bo Li; Yu-Ping Ning; Feng-Chun Wu; Kai Wu
Journal:  Sci Rep       Date:  2021-07-19       Impact factor: 4.379

3.  AT-NeuroEAE: A Joint Extraction Model of Events With Attributes for Research Sharing-Oriented Neuroimaging Provenance Construction.

Authors:  Shaofu Lin; Zhe Xu; Ying Sheng; Lihong Chen; Jianhui Chen
Journal:  Front Neurosci       Date:  2022-03-07       Impact factor: 4.677

  3 in total

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