Literature DB >> 32499941

Dictionary learning technique enhances signal in LED-based photoacoustic imaging.

Parastoo Farnia1,2,3, Ebrahim Najafzadeh1,2,3, Ali Hariri4, Saeedeh Navaei Lavasani2,5, Bahador Makkiabadi1,2, Alireza Ahmadian1,2, Jesse V Jokerst4,6,7.   

Abstract

There has been growing interest in low-cost light sources such as light-emitting diodes (LEDs) as an excitation source in photoacoustic imaging. However, LED-based photoacoustic imaging is limited by low signal due to low energy per pulse-the signal is easily buried in noise leading to low quality images. Here, we describe a signal de-noising approach for LED-based photoacoustic signals based on dictionary learning with an alternating direction method of multipliers. This signal enhancement method is then followed by a simple reconstruction approach delay and sum. This approach leads to sparse representation of the main components of the signal. The main improvements of this approach are a 38% higher contrast ratio and a 43% higher axial resolution versus the averaging method but with only 4% of the frames and consequently 49.5% less computational time. This makes it an appropriate option for real-time LED-based photoacoustic imaging.
© 2020 Optical Society of America under the terms of the OSA Open Access Publishing Agreement.

Year:  2020        PMID: 32499941      PMCID: PMC7249823          DOI: 10.1364/BOE.387364

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  35 in total

1.  Noise-equivalent sensitivity of photoacoustics.

Authors:  Amy M Winkler; Konstantin Maslov; Lihong V Wang
Journal:  J Biomed Opt       Date:  2013-09       Impact factor: 3.170

2.  Automated wavelet denoising of photoacoustic signals for circulating melanoma cell detection and burn image reconstruction.

Authors:  Scott H Holan; John A Viator
Journal:  Phys Med Biol       Date:  2008-05-21       Impact factor: 3.609

3.  Development of low-cost photoacoustic imaging systems using very low-energy pulsed laser diodes.

Authors:  Ali Hariri; Afreen Fatima; Nafiseh Mohammadian; Sadreddin Mahmoodkalayeh; Mohammad Ali Ansari; Nicholas Bely; Mohammad R N Avanaki
Journal:  J Biomed Opt       Date:  2017-07-01       Impact factor: 3.170

4.  Orthogonal Procrustes Analysis for Dictionary Learning in Sparse Linear Representation.

Authors:  Giuliano Grossi; Raffaella Lanzarotti; Jianyi Lin
Journal:  PLoS One       Date:  2017-01-19       Impact factor: 3.240

Review 5.  Photoacoustic tomography: in vivo imaging from organelles to organs.

Authors:  Lihong V Wang; Song Hu
Journal:  Science       Date:  2012-03-23       Impact factor: 47.728

6.  Full-wave iterative image reconstruction in photoacoustic tomography with acoustically inhomogeneous media.

Authors:  Chao Huang; Kun Wang; Liming Nie; Lihong V Wang; Mark A Anastasio
Journal:  IEEE Trans Med Imaging       Date:  2013-03-22       Impact factor: 10.048

Review 7.  A practical guide to photoacoustic tomography in the life sciences.

Authors:  Lihong V Wang; Junjie Yao
Journal:  Nat Methods       Date:  2016-07-28       Impact factor: 28.547

8.  High power visible light emitting diodes as pulsed excitation sources for biomedical photoacoustics.

Authors:  Thomas J Allen; Paul C Beard
Journal:  Biomed Opt Express       Date:  2016-03-14       Impact factor: 3.732

9.  Dictionary learning-based reverberation removal enables depth-resolved photoacoustic microscopy of cortical microvasculature in the mouse brain.

Authors:  Sushanth Govinahallisathyanarayana; Bo Ning; Rui Cao; Song Hu; John A Hossack
Journal:  Sci Rep       Date:  2018-01-17       Impact factor: 4.379

10.  Deep learning for photoacoustic tomography from sparse data.

Authors:  Stephan Antholzer; Markus Haltmeier; Johannes Schwab
Journal:  Inverse Probl Sci Eng       Date:  2018-09-11       Impact factor: 1.950

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  8 in total

1.  Sparse Coding-Enabled Low-Fluence Multi-Parametric Photoacoustic Microscopy.

Authors:  Zhuoying Wang; Yifeng Zhou; Song Hu
Journal:  IEEE Trans Med Imaging       Date:  2022-04-01       Impact factor: 11.037

2.  Optimizing Irradiation Geometry in LED-Based Photoacoustic Imaging with 3D Printed Flexible and Modular Light Delivery System.

Authors:  Maju Kuriakose; Christopher D Nguyen; Mithun Kuniyil Ajith Singh; Srivalleesha Mallidi
Journal:  Sensors (Basel)       Date:  2020-07-06       Impact factor: 3.576

3.  Photoacoustic Imaging of Human Vasculature Using LED versus Laser Illumination: A Comparison Study on Tissue Phantoms and In Vivo Humans.

Authors:  Sumit Agrawal; Mithun Kuniyil Ajith Singh; Kerrick Johnstonbaugh; David C Han; Colette R Pameijer; Sri-Rajasekhar Kothapalli
Journal:  Sensors (Basel)       Date:  2021-01-09       Impact factor: 3.576

4.  Oxygen Saturation Imaging Using LED-Based Photoacoustic System.

Authors:  Rianne Bulsink; Mithun Kuniyil Ajith Singh; Marvin Xavierselvan; Srivalleesha Mallidi; Wiendelt Steenbergen; Kalloor Joseph Francis
Journal:  Sensors (Basel)       Date:  2021-01-04       Impact factor: 3.576

5.  Modeling combined ultrasound and photoacoustic imaging: Simulations aiding device development and artificial intelligence.

Authors:  Sumit Agrawal; Thaarakh Suresh; Ankit Garikipati; Ajay Dangi; Sri-Rajasekhar Kothapalli
Journal:  Photoacoustics       Date:  2021-09-15

6.  Motion-compensated noninvasive periodontal health monitoring using handheld and motor-based photoacoustic-ultrasound imaging systems.

Authors:  Moein Mozaffarzadeh; Colman Moore; Erfan Barzegar Golmoghani; Yash Mantri; Ali Hariri; Alec Jorns; Lei Fu; Martin D Verweij; Mahdi Orooji; Nico de Jong; Jesse V Jokerst
Journal:  Biomed Opt Express       Date:  2021-02-23       Impact factor: 3.732

7.  Photoacoustic image improvement based on a combination of sparse coding and filtering.

Authors:  Ebrahim Najafzadeh; Parastoo Farnia; Saeedeh N Lavasani; Maryam Basij; Yan Yan; Hossein Ghadiri; Alireza Ahmadian; Mohammad Mehrmohammadi
Journal:  J Biomed Opt       Date:  2020-10       Impact factor: 3.170

8.  Photoacoustic-MR Image Registration Based on a Co-Sparse Analysis Model to Compensate for Brain Shift.

Authors:  Parastoo Farnia; Bahador Makkiabadi; Maysam Alimohamadi; Ebrahim Najafzadeh; Maryam Basij; Yan Yan; Mohammad Mehrmohammadi; Alireza Ahmadian
Journal:  Sensors (Basel)       Date:  2022-03-21       Impact factor: 3.576

  8 in total

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