Literature DB >> 18495977

Automated wavelet denoising of photoacoustic signals for circulating melanoma cell detection and burn image reconstruction.

Scott H Holan1, John A Viator.   

Abstract

Photoacoustic image reconstruction may involve hundreds of point measurements, each of which contributes unique information about the subsurface absorbing structures under study. For backprojection imaging, two or more point measurements of photoacoustic waves induced by irradiating a biological sample with laser light are used to produce an image of the acoustic source. Each of these measurements must undergo some signal processing, such as denoising or system deconvolution. In order to process the numerous signals, we have developed an automated wavelet algorithm for denoising signals. We appeal to the discrete wavelet transform for denoising photoacoustic signals generated in a dilute melanoma cell suspension and in thermally coagulated blood. We used 5, 9, 45 and 270 melanoma cells in the laser beam path as test concentrations. For the burn phantom, we used coagulated blood in 1.6 mm silicon tube submerged in Intralipid. Although these two targets were chosen as typical applications for photoacoustic detection and imaging, they are of independent interest. The denoising employs level-independent universal thresholding. In order to accommodate nonradix-2 signals, we considered a maximal overlap discrete wavelet transform (MODWT). For the lower melanoma cell concentrations, as the signal-to-noise ratio approached 1, denoising allowed better peak finding. For coagulated blood, the signals were denoised to yield a clean photoacoustic resulting in an improvement of 22% in the reconstructed image. The entire signal processing technique was automated so that minimal user intervention was needed to reconstruct the images. Such an algorithm may be used for image reconstruction and signal extraction for applications such as burn depth imaging, depth profiling of vascular lesions in skin and the detection of single cancer cells in blood samples.

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Year:  2008        PMID: 18495977     DOI: 10.1088/0031-9155/53/12/N01

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  15 in total

Review 1.  Photoacoustic tomography and sensing in biomedicine.

Authors:  Changhui Li; Lihong V Wang
Journal:  Phys Med Biol       Date:  2009-09-01       Impact factor: 3.609

2.  Gold nanoparticle-mediated detection of circulating cancer cells.

Authors:  Kiran Bhattacharyya; Benjamin S Goldschmidt; Mark Hannink; Stephen Alexander; Aleksander Jurkevic; John A Viator
Journal:  Clin Lab Med       Date:  2012-03       Impact factor: 1.935

3.  Enrichment and ratiometric detection of circulating tumor cells using PSMA- and folate receptor-targeted magnetic and surface-enhanced Raman scattering nanoparticles.

Authors:  Pradyumna Kedarisetti; Vincent R Bouvet; Wei Shi; Cody N Bergman; Jennifer Dufour; Afshin Kashani Ilkhechi; Kevan L Bell; Robert J Paproski; John D Lewis; Frank R Wuest; Roger J Zemp
Journal:  Biomed Opt Express       Date:  2020-10-08       Impact factor: 3.732

4.  Dictionary learning technique enhances signal in LED-based photoacoustic imaging.

Authors:  Parastoo Farnia; Ebrahim Najafzadeh; Ali Hariri; Saeedeh Navaei Lavasani; Bahador Makkiabadi; Alireza Ahmadian; Jesse V Jokerst
Journal:  Biomed Opt Express       Date:  2020-04-14       Impact factor: 3.732

Review 5.  Nanotechnology for enrichment and detection of circulating tumor cells.

Authors:  Saheel Bhana; Yongmei Wang; Xiaohua Huang
Journal:  Nanomedicine (Lond)       Date:  2015-07       Impact factor: 5.307

6.  Multiscale photoacoustic microscopy and computed tomography.

Authors:  Lihong V Wang
Journal:  Nat Photonics       Date:  2009-08-29       Impact factor: 38.771

7.  Sparse Coding-Enabled Low-Fluence Multi-Parametric Photoacoustic Microscopy.

Authors:  Zhuoying Wang; Yifeng Zhou; Song Hu
Journal:  IEEE Trans Med Imaging       Date:  2022-04-01       Impact factor: 11.037

8.  Ultra-fast photoacoustic flow cytometry with a 0.5 MHz pulse repetition rate nanosecond laser.

Authors:  Dmitry A Nedosekin; Mustafa Sarimollaoglu; Evgeny V Shashkov; Ekaterina I Galanzha; Vladimir P Zharov
Journal:  Opt Express       Date:  2010-04-12       Impact factor: 3.894

9.  Optoacoustic imaging and tomography: reconstruction approaches and outstanding challenges in image performance and quantification.

Authors:  Christian Lutzweiler; Daniel Razansky
Journal:  Sensors (Basel)       Date:  2013-06-04       Impact factor: 3.576

10.  Evanescent Field Based Photoacoustics: Optical Property Evaluation at Surfaces.

Authors:  Benjamin S Goldschmidt; Anna M Rudy; Charissa A Nowak; Yowting Tsay; Paul J D Whiteside; Heather K Hunt
Journal:  J Vis Exp       Date:  2016-07-26       Impact factor: 1.355

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