Literature DB >> 32496909

Systems Genetics for Mechanistic Discovery in Heart Diseases.

Christoph D Rau1,2,3, Aldons J Lusis4, Yibin Wang1,2,3.   

Abstract

Cardiovascular diseases are the leading cause of death worldwide. Complex diseases with highly heterogenous disease progression among patient populations, cardiovascular diseases feature multifactorial contributions from both genetic and environmental stressors. Despite significant effort utilizing multiple approaches from molecular biology to genome-wide association studies, the genetic landscape of cardiovascular diseases, particularly for the nonfamilial forms of heart failure, is still poorly understood. In the past decade, systems-level approaches based on omics technologies have become an important approach for the study of complex traits in large populations. These advances create opportunities to integrate genetic variation with other biological layers to identify and prioritize candidate genes, understand pathogenic pathways, and elucidate gene-gene and gene-environment interactions. In this review, we will highlight some of the recent progress made using systems genetics approaches to uncover novel mechanisms and molecular bases of cardiovascular pathophysiological manifestations. The key technology and data analysis platforms necessary to implement systems genetics will be described, and the current major challenges and future directions will also be discussed. For complex cardiovascular diseases, such as heart failure, systems genetics represents a powerful strategy to obtain mechanistic insights and to develop individualized diagnostic and therapeutic regiments, paving the way for precision cardiovascular medicine.

Entities:  

Keywords:  cause of death; data analysis; genes; genetics; heart diseases; systems biology

Mesh:

Year:  2020        PMID: 32496909      PMCID: PMC7286104          DOI: 10.1161/CIRCRESAHA.119.315863

Source DB:  PubMed          Journal:  Circ Res        ISSN: 0009-7330            Impact factor:   17.367


  159 in total

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Review 3.  DNA methylation-based biomarkers and the epigenetic clock theory of ageing.

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4.  Gut microbiota from twins discordant for obesity modulate metabolism in mice.

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Journal:  Science       Date:  2013-09-06       Impact factor: 47.728

5.  Defining the consequences of genetic variation on a proteome-wide scale.

Authors:  Joel M Chick; Steven C Munger; Petr Simecek; Edward L Huttlin; Kwangbom Choi; Daniel M Gatti; Narayanan Raghupathy; Karen L Svenson; Gary A Churchill; Steven P Gygi
Journal:  Nature       Date:  2016-06-15       Impact factor: 49.962

6.  BS-Seeker2: a versatile aligning pipeline for bisulfite sequencing data.

Authors:  Weilong Guo; Petko Fiziev; Weihong Yan; Shawn Cokus; Xueguang Sun; Michael Q Zhang; Pao-Yang Chen; Matteo Pellegrini
Journal:  BMC Genomics       Date:  2013-11-10       Impact factor: 3.969

7.  Whole-exome sequencing identifies common and rare variant metabolic QTLs in a Middle Eastern population.

Authors:  Noha A Yousri; Khalid A Fakhro; Amal Robay; Juan L Rodriguez-Flores; Robert P Mohney; Hassina Zeriri; Tala Odeh; Sara Abdul Kader; Eman K Aldous; Gaurav Thareja; Manish Kumar; Alya Al-Shakaki; Omar M Chidiac; Yasmin A Mohamoud; Jason G Mezey; Joel A Malek; Ronald G Crystal; Karsten Suhre
Journal:  Nat Commun       Date:  2018-01-23       Impact factor: 14.919

8.  Adipose-derived circulating miRNAs regulate gene expression in other tissues.

Authors:  Thomas Thomou; Marcelo A Mori; Jonathan M Dreyfuss; Masahiro Konishi; Masaji Sakaguchi; Christian Wolfrum; Tata Nageswara Rao; Jonathon N Winnay; Ruben Garcia-Martin; Steven K Grinspoon; Phillip Gorden; C Ronald Kahn
Journal:  Nature       Date:  2017-02-15       Impact factor: 49.962

9.  An integrative cross-omics analysis of DNA methylation sites of glucose and insulin homeostasis.

Authors:  Jun Liu; Elena Carnero-Montoro; Jenny van Dongen; Samantha Lent; Ivana Nedeljkovic; Symen Ligthart; Pei-Chien Tsai; Tiphaine C Martin; Pooja R Mandaviya; Rick Jansen; Marjolein J Peters; Liesbeth Duijts; Vincent W V Jaddoe; Henning Tiemeier; Janine F Felix; Gonneke Willemsen; Eco J C de Geus; Audrey Y Chu; Daniel Levy; Shih-Jen Hwang; Jan Bressler; Rahul Gondalia; Elias L Salfati; Christian Herder; Bertha A Hidalgo; Toshiko Tanaka; Ann Zenobia Moore; Rozenn N Lemaitre; Min A Jhun; Jennifer A Smith; Nona Sotoodehnia; Stefania Bandinelli; Luigi Ferrucci; Donna K Arnett; Harald Grallert; Themistocles L Assimes; Lifang Hou; Andrea Baccarelli; Eric A Whitsel; Ko Willems van Dijk; Najaf Amin; André G Uitterlinden; Eric J G Sijbrands; Oscar H Franco; Abbas Dehghan; Tim D Spector; Josée Dupuis; Marie-France Hivert; Jerome I Rotter; James B Meigs; James S Pankow; Joyce B J van Meurs; Aaron Isaacs; Dorret I Boomsma; Jordana T Bell; Ayşe Demirkan; Cornelia M van Duijn
Journal:  Nat Commun       Date:  2019-06-13       Impact factor: 14.919

10.  Generalization and dilution of association results from European GWAS in populations of non-European ancestry: the PAGE study.

Authors:  Christopher S Carlson; Tara C Matise; Kari E North; Christopher A Haiman; Megan D Fesinmeyer; Steven Buyske; Fredrick R Schumacher; Ulrike Peters; Nora Franceschini; Marylyn D Ritchie; David J Duggan; Kylee L Spencer; Logan Dumitrescu; Charles B Eaton; Fridtjof Thomas; Alicia Young; Cara Carty; Gerardo Heiss; Loic Le Marchand; Dana C Crawford; Lucia A Hindorff; Charles L Kooperberg
Journal:  PLoS Biol       Date:  2013-09-17       Impact factor: 8.029

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2.  Cardiomyocytes disrupt pyrimidine biosynthesis in nonmyocytes to regulate heart repair.

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Journal:  J Clin Invest       Date:  2022-01-18       Impact factor: 19.456

3.  YAP: The nexus between metabolism and cardiac remodeling.

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Journal:  J Clin Invest       Date:  2022-03-15       Impact factor: 14.808

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Review 5.  The Human Explanted Heart Program: A translational bridge for cardiovascular medicine.

Authors:  Hao Zhang; Anissa Viveiros; Anish Nikhanj; Quynh Nguyen; Kaiming Wang; Wei Wang; Darren H Freed; John C Mullen; Roderick MacArthur; Daniel H Kim; Wayne Tymchak; Consolato M Sergi; Zamaneh Kassiri; Shaohua Wang; Gavin Y Oudit
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2020-10-22       Impact factor: 5.187

  5 in total

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