Literature DB >> 32487545

Roles of polyunsaturated fatty acids, from mediators to membranes.

Takeshi Harayama1, Takao Shimizu2.   

Abstract

PUFAs, such as AA and DHA, are recognized as important biomolecules, but understanding their precise roles and modes of action remains challenging. PUFAs are precursors for a plethora of signaling lipids, for which knowledge about synthetic pathways and receptors has accumulated. However, due to their extreme diversity and the ambiguity concerning the identity of their cognate receptors, the roles of PUFA-derived signaling lipids require more investigation. In addition, PUFA functions cannot be explained just as lipid mediator precursors because they are also critical for the regulation of membrane biophysical properties. The presence of PUFAs in membrane lipids also affects the functions of transmembrane proteins and peripheral membrane proteins. Although the roles of PUFAs as membrane lipid building blocks were difficult to analyze, the discovery of lysophospholipid acyltransferases (LPLATs), which are critical for their incorporation, advanced our understanding. Recent studies unveiled how LPLATs affect PUFA levels in membrane lipids, and their genetic manipulation became an excellent strategy to study the roles of PUFA-containing lipids. In this review, we will provide an overview of metabolic pathways regulating PUFAs as lipid mediator precursors and membrane components and update recent progress about their functions. Some issues to be solved for future research will also be discussed.
Copyright © 2020 Harayama and Shimizu. Published by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  G protein-coupled receptors; eicosanoids; glycerophospholipids; membrane biology; membrane biophysics

Year:  2020        PMID: 32487545      PMCID: PMC7397749          DOI: 10.1194/jlr.R120000800

Source DB:  PubMed          Journal:  J Lipid Res        ISSN: 0022-2275            Impact factor:   5.922


The importance of PUFAs in health and disease gained general attention, as exemplified by the belief that eating more ω-3 PUFAs is good for health. PUFAs are fatty acids that have two or more double bonds, which can be illustrated as XX:Yω-Z (XX, Y, and Z are carbon number, double bond number, and the position of the first double bond from the methyl end, respectively). They cannot be synthesized endogenously in mammals, except for mead acid (20:3ω-9), which is produced under PUFA deficiency (1). Therefore, PUFAs are essential nutrients that have to be obtained from the diet. While important PUFAs, such as AA (20:4ω-6) and DHA (22:6ω-3), can be directly taken up from the diet, they can also be converted from other PUFAs endogenously. The liver has a major contribution in this process, where dietary linoleic acid (LA; 18:2ω-6) and α-linolenic acid (18:3ω-3) are metabolized into other PUFAs by desaturases, elongases, and peroxisomal β-oxidation (2) (). Peroxisomes are critical for the final step of DHA synthesis, and their dysfunction leads to the accumulation of the otherwise minor intermediate PUFA, tetracosahexaenoic acid (24:6ω-3) (3). Analysis of mice lacking elongases or desaturases revealed PUFA functions in brain, metabolic tissues, reproductive organs, and blood cells (4–13). While some of the phenotypes of these mice were seen only when fed PUFA-deficient diets, others, such as the lean phenotype of Fads1-deficient mice (14), were observed even when the diets were PUFA sufficient (7). This supports the importance of obtaining sufficient levels of PUFAs both from the diet and from endogenous conversion. Importantly, the possibility to rescue the phenotypes by dietary intervention was dependent on which PUFA to give, clearly demonstrating the nonredundancy in their functions (). The importance of PUFAs has also been analyzed by feeding them in cell culture, revealing important roles in osteogenesis (15) and mechanosensing (16), among many others. While such in vivo and in cellulo experiments support the biological importance of PUFAs, understanding the molecular mechanisms of PUFA functions remains challenging.
Fig. 1.

Synthesis and metabolism of PUFAs. A: PUFA conversion from the essential fatty acids, LA and α-linolenic acid (ALA), by the indicated enzymes. FADS2 is proposed to desaturate other positions as well (115), which is not depicted here. “XX:Yω-Z” illustrates a PUFA with XX carbons, Y double bonds, and the first double bond at the Zth carbon from the methyl end. Note the absence of inter-conversion between ω-6 and ω-3 PUFAs. B: Synthesis of GPLs from glycerol 3-phosphate (G3P), and generation of lipid mediators thereof. Arrows with numbers illustrate steps where free fatty acids (FFAs) are generated (arrow 1, PLA2; arrow 2, TAG lipase; and arrow 3, MAG lipase), which can be further used to generate PUFA-derivatives. For simplicity, acyl-chain remodeling (Lands’ cycle) is illustrated only for PC and PI, but the pathway is functional for other GPLs as well. The LPLATs important for PUFA incorporation are illustrated. Although the presence of a LPAAT important for LA accumulation is suggested (72), the responsible gene is unknown (indicated as “x” here). Cofactors and byproducts of enzymatic reactions are omitted. AGPAT3 and MBOAT7 are also termed LPAAT3 and LPIAT1, respectively. CDP-DAG, cytidine diphosphate-diacylglycerol; CL, cardiolipin; DAG, diacylglycerol; LPA, lysoPA; MAG, monoacylglycerol; NAE, N-acylethanolamine; NAPE, N-acyl PE; PI(4,5)P2, PI 4,5-bisphosphate; PI4P, PI 4-phosphate; SAG, stearoyl-arachidonoyl glycerol; TAG, triacylglycerol.

TABLE 1.

Phenotypes of mice lacking the enzymes of Fig. 1A (not exhaustive) or LPLATs involved in the incorporation of PUFAs into membrane GPLs

GeneTissuePUFAs DecreasedPUFAs IncreasedPhenotypeRescued ByNot Rescued By
Elovl2Testis22:5ω-6, 22:6ω-3, 24:5ω-6, 26:5ω-6, 28:5ω-6, 30:5ω-620:4ω-6, 22:4ω-6Sterility22:6ω-3
Liver22:5ω-6, 22:6ω-320:4ω-6, 20:5ω-3, 22:4ω-6, 22:5ω-3Prevention of hepatic steatosis22:6ω-3
LiverHigh nuclear SREBP-1c22:6ω-3
MacrophagesChanges in inflammatory profiles22:6ω-3
Elovl5Liver20:4ω-6, 20:5ω-3, 22:6ω-318:2ω-6, 18:3ω-3, 18:4ω-3Hepatic steatosis20:4ω-6, 22:6ω-3
Fads1Whole body20:4ω-620:3ω-6Lethality20:4ω-6
Fads2PlateletsReduced thromboembolism20:4ω-6
Ovary20:4, 22:6, 24:518:2, 20:2Sterility20:5ω-3 + 22:6ω-3
Testis20:4, 22:5, 22:6, 24:5, 26:5, 28:5, 30:518:2Sterility20:5ω-3 + 22:6ω-3
Skin, intestineUlcer formation20:4ω-6
Testis20:4ω-6, 20:5ω-3, 22:4ω-6, 22:5ω-6, 22:6ω-3, 26:5ω-6, 28:5ω-6, 30:5ω-620:3(Δ7,11,14)Sterility22:6ω-320:4ω-6 (partial)
Liver20:4, 22:618:2, 20:3Hepatic steatosis20:4ω-622:6ω-3
Whole bodyWeight loss20:4ω-622:6ω-3
Brain20:4ω-6, 22:4ω-6, 22:6ω-318:2ω-6Decreased brain functions22:6ω-320:4ω-6 (partial)
Agpat3/Lpaat3Testis22:6ω-3Sterility
Retina22:6ω-3Blindness
Lpcat3Small intestine18:2ω-6, 20:4ω-622:4ω-6, 22:5ω-6, 22:6ω-3Neutral lipid overaccumulation
Small intestine18:2, 18:3, 20:4Neutral lipid overaccumulation
Intestinal stem cells18:2, 20:4Cholesterol overproduction, overproliferation
Embryonic liver18:2ω-6, 20:3ω-6, 20:4ω-622:4ω-6, 22:5ω-6, 22:6ω-3Neutral lipid overaccumulation
Liver20:4Reduced neutral lipid secretion
Liver20:4Reduced nuclear SREBP-1c
Hematopoietic cells20:4, 20:522:4Increased cholesterol, promotion of atherosclerosis
Myeloid cells20:4Altered cytokine profile
Mboat7/Lpiat1Brain20:4Brain malformation, fatty liver

Only phenotypes that were tested for rescue by dietary PUFAs are listed in the case for elongases and desaturases.

Synthesis and metabolism of PUFAs. A: PUFA conversion from the essential fatty acids, LA and α-linolenic acid (ALA), by the indicated enzymes. FADS2 is proposed to desaturate other positions as well (115), which is not depicted here. “XX:Yω-Z” illustrates a PUFA with XX carbons, Y double bonds, and the first double bond at the Zth carbon from the methyl end. Note the absence of inter-conversion between ω-6 and ω-3 PUFAs. B: Synthesis of GPLs from glycerol 3-phosphate (G3P), and generation of lipid mediators thereof. Arrows with numbers illustrate steps where free fatty acids (FFAs) are generated (arrow 1, PLA2; arrow 2, TAG lipase; and arrow 3, MAG lipase), which can be further used to generate PUFA-derivatives. For simplicity, acyl-chain remodeling (Lands’ cycle) is illustrated only for PC and PI, but the pathway is functional for other GPLs as well. The LPLATs important for PUFA incorporation are illustrated. Although the presence of a LPAAT important for LA accumulation is suggested (72), the responsible gene is unknown (indicated as “x” here). Cofactors and byproducts of enzymatic reactions are omitted. AGPAT3 and MBOAT7 are also termed LPAAT3 and LPIAT1, respectively. CDP-DAG, cytidine diphosphate-diacylglycerol; CL, cardiolipin; DAG, diacylglycerol; LPA, lysoPA; MAG, monoacylglycerol; NAE, N-acylethanolamine; NAPE, N-acyl PE; PI(4,5)P2, PI 4,5-bisphosphate; PI4P, PI 4-phosphate; SAG, stearoyl-arachidonoyl glycerol; TAG, triacylglycerol. Phenotypes of mice lacking the enzymes of Fig. 1A (not exhaustive) or LPLATs involved in the incorporation of PUFAs into membrane GPLs Only phenotypes that were tested for rescue by dietary PUFAs are listed in the case for elongases and desaturases. PUFAs have two major modes of action: precursors of signaling lipids (lipid mediators) and building blocks of membrane lipids (17). It is thus important to recognize the pleiotropic functions of PUFAs and dissect their modes of action. This necessity made PUFA research an exciting multidisciplinary field at the interface of biology, biophysics, and chemical biology. Here, we will highlight the complex metabolism of PUFAs, the investigation of which elucidated PUFA functions, as lipid mediators and in membranes.

PUFA-DERIVATIVES IN SIGNALING

Multiple lipid mediators are produced downstream of glycerophospholipid (GPL) synthesis (Fig. 1B). They include metabolites of PUFAs (e.g., eicosanoids, docosanoids) and lipids with esterified PUFAs [e.g., 2-arachidonoylglycerol (2-AG)], collectively termed PUFA-derivatives here ().
Fig. 2.

PUFA-derivatives as ligands and their receptors. A: Structures of selected PUFA-derivatives. Prostaglandin E2 (ligand for EP1-EP4), leukotriene B4 (ligand for BLT1), and 12-hydroxyheptadecatrienoic acid (ligand for BLT2) are metabolites of AA. 2-Arachidonoyl lysophosphatidylinositol (ligand for GPR55), 2-arachidonoyl glycerol, and anandamide (both ligands for CB1 and CB2) contain AA in the esterified form. 13-DHAHLA was recently discovered and its receptor is unknown. B: Phylogenetic tree of selected GPCRs, with emphasis on those that use lipids as ligands. The nomenclature and phylogenetic tree analysis of receptors is based on GPCRdb (https://gpcrdb.org). Smaller symbols represent receptors of which the name does not reflect the proposed lipid ligand. Replication studies are especially important for these receptors. Note that some of the proteins not classified as “PUFA-derivative” receptors can still use PUFA-derivatives as ligands (e.g., some lysophosphatidic acid receptors can sense PUFA-containing molecules), although they do not sense PUFA-derivatives exclusively.

PUFA-derivatives as ligands and their receptors. A: Structures of selected PUFA-derivatives. Prostaglandin E2 (ligand for EP1-EP4), leukotriene B4 (ligand for BLT1), and 12-hydroxyheptadecatrienoic acid (ligand for BLT2) are metabolites of AA. 2-Arachidonoyl lysophosphatidylinositol (ligand for GPR55), 2-arachidonoyl glycerol, and anandamide (both ligands for CB1 and CB2) contain AA in the esterified form. 13-DHAHLA was recently discovered and its receptor is unknown. B: Phylogenetic tree of selected GPCRs, with emphasis on those that use lipids as ligands. The nomenclature and phylogenetic tree analysis of receptors is based on GPCRdb (https://gpcrdb.org). Smaller symbols represent receptors of which the name does not reflect the proposed lipid ligand. Replication studies are especially important for these receptors. Note that some of the proteins not classified as “PUFA-derivative” receptors can still use PUFA-derivatives as ligands (e.g., some lysophosphatidic acid receptors can sense PUFA-containing molecules), although they do not sense PUFA-derivatives exclusively.

Diversity of PUFA-derivatives

AA is mainly esterified at the sn-2 position of GPLs, such as PC, PE, PS, phosphatidylglycerol, and PI. PI is especially rich in AA (with stearic acid at the sn-1 position), while other GPLs have more diverse acyl-chains (18). After being released from GPLs by phospholipase A2 (PLA2) enzymes (Fig. 1B, arrow 1), AA is converted into more than a hundred different lipid mediators (eicosanoids) by cyclooxygenases, lipoxygenases, cytochrome P450 enzymes, and specific synthases (17). Among PLA2s, cytosolic PLA2α (cPLA2α) causes translocation from cytosol to perinuclear membranes upon various stimuli and is especially important for eicosanoid production (19). Analyses of cPLA2α using hydrogen/deuterium exchange mass spectrometry and molecular dynamics revealed how the enzyme uses its C2 domain to bind membranes upon calcium binding (20, 21), to which atomistic details were brought by a recent structural analysis of the C2 domain complexed with a PC membrane (19). In addition to perinuclear membranes, cPLA2α localizes to the base of primary cilia, where it releases AA to regulate ciliary trafficking of Smoothened, the signal transducer of the Sonic Hedgehog pathway (22). Mice lacking cPLA2α have drastic decreases in eicosanoids and are protected from disease models that include anaphylaxis, asthma, and experimental allergic encephalomyelitis (17). However, they also display abnormalities in labor and synaptic plasticity, demonstrating the pleiotropy of eicosanoid functions (23, 24). The implication of other phospholipases in the release of PUFAs from GPLs is well recapitulated in another review (25). While AA release from GPLs has been studied intensively, other sources of AA for eicosanoid synthesis have been documented, such as triglycerides and 2-AG (26, 27) (Fig. 1B, arrows 2 and 3). Eicosanoids produced downstream of the hydrolysis of 2-AG (which is also a lipid mediator) by monoacylglycerol lipase are especially important in the brain, with implications in neuroinflammation and fever responses (27, 28). Blockade of this pathway reduces eicosanoid production and ameliorates a mouse model of Alzheimer’s disease (29). This pathway is also active outside the brain, as has been shown in a model of hepatic injury (30). PI, being rich in AA, is a good source of 2-AG, and might feed efficiently into this pathway (Fig. 1B). Eicosanoids are only one part of the diverse repertoire of PUFA-derivatives; other PUFAs are converted into lipid mediators through similar pathways. Those generated from the ω-3 PUFAs, EPA and DHA, are generally regarded as pro-resolving lipid mediators, in contrast to the pro-inflammatory eicosanoids (31, 32). This view is oversimplified though, and some ω-3 PUFA-derivatives promote allergic responses while the eicosanoid lipoxin A4 is pro-resolving (31–33). Recent investigations revealed important roles of the secreted PLA2 group 2D (PLA2G2D) in the release of PUFAs, including ω-3 PUFAs, from extracellular GPL substrates to generate pro-resolving lipid mediators. PLA2G2D deficiency reduces the production of pro-resolving lipid mediators in the lymph nodes and delays the resolution of contact dermatitis in mice (34). In addition, DHA released by M2-type macrophage-derived PLA2G2D in adipose tissues promotes the generation of beige adipocytes (35). DHA acts as a ligand for free fatty acid receptor 4, which is expressed in primary cilia of preadipocytes and regulates adipogenesis (36). Thus, the ω-3 PUFA DHA has various effects on adipocyte functions. Together with its anti-inflammatory function on macrophages (37), the pleiotropic roles of DHA as a lipid mediator contribute to metabolic health. Lipid mediators containing esterified PUFAs are also numerous, such as the cannabinoid receptor ligands 2-AG and anandamide (N-arachidonoylethanolamine). They mediate retrograde signaling in neuronal synapses and regulate appetite and pain, while having peripheral functions in the immune system as well (38, 39). Another example is 2-arachidonoyl LPI, which is synthesized from PI via the action of phospholipase A1 (40). One of its functions is to regulate lymphocyte migration as a ligand for the G protein-coupled receptor (GPCR) GPR55 (41). In addition to this already exhaustive list, novel PUFA-derivatives and synthetic pathways are continuously discovered, such as the hemiketal eicosanoids and fatty acid esters of hydroxy fatty acids (FAHFAs) (42, 43).

Signaling by PUFA-derivatives

PUFA-derivatives signal through their receptors, which include GPCRs, ion channels, and nuclear receptors (the last two tend to be more promiscuous). So far, many GPCRs are proposed as PUFA-derivative receptors (Fig. 2B), but conflicting results are often reported between studies using different assays (44, 45), and some might be invalidated in the future. In addition, the presence of multiple receptors for the same ligand [e.g., four prostaglandin E2 receptors (46)] or the presence of nonlipid ligands for proposed lipid receptors [e.g., GPR132, also termed G2A, reported to be a proton sensor (47) and a receptor for 9-hydroxyoctadecadienoic acid (48); chemerin being a protein ligand for the proposed receptor of resolvin E1 (49)] should be taken into account when considering the functions of PUFA-derivatives. For example, GPR37 is proposed as the receptor for DHA-derived neuroprotective and anti-inflammatory protectin D1 (50), while the peptide prosaptide also acts through the same receptor and has similar neuroprotective roles (51). Therefore, it will be important for future studies, especially for PUFA-derivatives that do not have a long history of research, to investigate whether the effects of receptor blockade correspond to those of interference with ligand synthesis. For PUFA-derivatives having well-validated receptors, such as the eicosanoid prostaglandin E2, genetic disruption or inhibitors can be used to investigate in vivo functions. Prostaglandin E2 has been implicated in colon cancer through multiple genetic studies, with consistent phenotypes between mutant mice of synthetic enzymes (52, 53) and receptors (54). In a recent study, single-cell RNA sequencing was used to identify a rare fibroblast population producing prostaglandin E2, which promotes tumor initiation by activating Yap nuclear localization in stem cells that are in proximity (55). In the same study, fibroblast-produced prostaglandin E2 was shown to be part of a regenerative program after intestinal damage, thereby revealing the correct biological functions of this lipid mediator. With reliable information about synthetic enzymes and receptors, single-cell RNA sequencing approaches might be used similarly in different contexts to identify PUFA-derivative functions. Our understanding of PUFA-derivative signaling advanced especially in the context of structural biology. The number of reported GPCR structures is expanding, such as the crystal structures of leukotriene B4 receptor BLT1 and the prostaglandin D2 receptor DP2 (56, 57). The structure of prostaglandin E2 receptor EP3 was solved in the presence of its endogenous ligand, revealing critical insights into ligand recognition (58). Molecular docking and molecular dynamics simulations have also been used to investigate the recognition of endogenous ligands for other receptors (59, 60). The structure of the cannabinoid receptor CB1 has been solved in multiple states, bound to inverse agonists, antagonists, agonists, and allosteric modulators or in complex with trimeric Gi protein, revealing the structural rearrangements upon ligand binding that lead to signaling events (59, 61–64). The structural characteristics of some GPCRs (e.g., DP2, EP4, TP, and LPA6), such as the presence of an occluded extracellular surface and side openings between transmembrane helices, suggested that the amphiphilic lipid ligands reach the receptor by lateral diffusion in the plasma membrane rather than directly from outside of the cells (57, 60, 65, 66). On the other hand, BLT1 ligand binding pocket is open on the extracellular surface (56), thus different lipid ligands reach their receptors in distinct ways. It will be interesting to understand how these different receptor-accessing modes affect the functions of PUFA-derivatives, such as their effective concentrations, the recognition of their concentration gradients, and their autocrine or paracrine behavior. To conclude, signaling by PUFA-derivatives is complex due to their diversity, the presence of multiple synthetic sources, and the multiple receptors of a single ligand. Nevertheless, genetic studies of enzymes and receptors unveiled various roles of PUFA-derivatives (17, 46, 67, 68), and structural analyses revealed atomistic insights of their functions. Methodological advances are ongoing to detect lipid mediators comprehensively (69) and to unveil the spatiotemporal regulation of receptor activation in vivo (70). It will be important to solve controversies regarding the assignment PUFA-derivative receptors, and researchers are encouraged to publish more replication studies (both positive and negative). With more reliability in receptors, we will be able to understand the degree to which PUFAs affect pathophysiological conditions as lipid mediator precursors, which might reveal novel therapeutic targets.

MEMBRANE PUFAS

Regulation of PUFA-GPLs

While dietary uptake affects whole-organism PUFA supply, tissue-specific functions of GPLs containing PUFAs (PUFA-GPLs) require factors that regulate their tissue distribution. The incorporation of PUFAs at the GPL sn-2 position, their main localization, is catalyzed by lysophospholipid acyltransferases (LPLATs) (Fig. 1B, bold arrows). These enzymes use lyso-GPLs and acyl-CoAs as substrates. During GPL de novo synthesis, lysophosphatidic acid acyltransferases (LPAATs) are the LPLATs that acylate the sn-2 position and generate the common precursor PA, which is further converted to other GPLs. Acyl-chains of individual GPLs can be remodeled in the “Lands’ cycle,” where one acyl-chain is removed and another one is reincorporated by other LPLATs (71, 72). At least for PC (the most abundant GPL), expression levels of LPLATs contribute to tissue differences in PUFA-GPL levels, where LPAATs and other LPLATs have different roles. LPAATs enable the accumulation of LA and DHA in PC (and possibly to other GPLs), while AA is mainly incorporated during the Lands’ cycle (72, 73). This conclusion is based on the correlation between PC acyl-chain composition and LPLAT substrate selectivity in various tissues (72), which was later validated in part by genetic studies (72–75). Indeed, disruption of the DHA-preferring AGPAT3 (also termed LPAAT3) drastically reduces DHA-containing GPLs (DHA-GPLs) (74, 75), while loss of the Lands’ cycle LPLATs, LPCAT3, and MBOAT7 (also termed LPIAT1) lowers AA levels in PC, PE, PS, and PI, respectively (73, 76). Enzyme activity measurements suggest the presence of LPAAT enzyme(s) regulating LA levels (72), but the molecular identity of the enzyme(s) remains to be identified. Thus, LPLATs regulate PUFA levels and tissue distribution, with clearly distinct contribution depending on the individual PUFA. High AA levels in PI might assist the PI cycle (Fig. 1B), where the PI head group is sequentially modified for signaling purposes, because some enzymes of the cycle prefer AA-containing substrates (18). While it is clear that LPLATs have a strong impact on the levels of PUFAs found in GPLs of different tissues, factors that affect tissue supply of PUFAs also exist. For example, MFSD2A is a lipid transporter required for DHA accretion in the brain. Importantly, MFSD2A does not transport free DHA, but rather lyso-PC that contains DHA (DHA-lyso-PC) (77). Thus, DHA-lyso-PC in the bloodstream is a critical source for brain DHA. While such a selectivity was already reported (78), the identification of MFSD2A provided clear molecular mechanisms. Strategies for improved DHA delivery to the brain are developing based on this discovery (79, 80), which might be tested for a therapeutic potential in neuronal diseases where DHA levels are decreased. Another factor affecting brain DHA levels is PE methyltransferase, which converts PE into PC in the liver (81). PE methyltransferase has preference to DHA-containing PE (DHA-PE). Thus, DHA delivery to the brain is a multistep process, requiring the conversion of DHA-PE into DHA-PC in the liver, and then its conversion into DHA-lyso-PC, which is finally taken up by MFSD2A. The mechanisms regulating DHA-PE levels and the enzymes required for DHA-lyso-PC synthesis remain to be clarified. For the latter, phospholipase A1 activity would be required, for which hepatic lipase and endothelial lipase are good candidates (80). The identification of other factors affecting tissue-specific PUFA uptake will be of great relevance. For example, fatty acid transporter protein 2 was recently found to affect AA uptake in neutrophils (82). It will be important to investigate how specifically this transporter and other related ones affect PUFA levels in various tissues.

Mechanisms of PUFA functions in membranes

PUFAs in GPLs have a higher structural plasticity than saturated fatty acids or MUFAs and can adopt highly kinked shapes. Consequently, PUFA-GPLs increase membrane disorder and affect their physical properties (83) (). Because MUFAs also induce disorder, we need to discuss PUFA functions with care and evaluate whether their effects on membrane physical properties differ from those of MUFAs in a biologically relevant manner. Also, PUFA-GPLs affect many physical properties simultaneously, and it remains difficult to know which ones, or which combinations of them, are important.
Fig. 3.

Physical properties of membranes affected by PUFA-containing GPLs. A: Color coding of GPLs. In this illustration, all the GPLs have a saturated acyl-chain at the sn-1 position, as is mainly seen in cells. B: Membranes with fewer unsaturated GPLs tend to be thicker (and less fluid) than those with more unsaturated GPLs, due to the higher order in the acyl-chains. Here, we assume the presence of unsaturated GPLs in both cases, to a level that prevents the formation of a gel phase. C: Unsaturated GPLs promote the formation of packing defects, which are water-accessible voids in membrane hydrophobic regions. Packing defects are more abundant in bent membranes not depicted here. The depth of packing defects tends to be shallower in the presence of PUFA-GPLs (arrows). Packing defects promote membrane binding of protein amphipathic helices, and their depth affects the selectivity of this interaction. Shallower defects accommodate amphipathic helices with less bulky hydrophobic side chains. D: PUFA-GPLs, when present in the convex leaflet of a bent membrane, decrease bending rigidity. E: Acyl-chains of GPLs affect the depth-dependent pressure profile exerted on neighboring molecules (lateral pressure profile), which can affect transmembrane protein functions.

Physical properties of membranes affected by PUFA-containing GPLs. A: Color coding of GPLs. In this illustration, all the GPLs have a saturated acyl-chain at the sn-1 position, as is mainly seen in cells. B: Membranes with fewer unsaturated GPLs tend to be thicker (and less fluid) than those with more unsaturated GPLs, due to the higher order in the acyl-chains. Here, we assume the presence of unsaturated GPLs in both cases, to a level that prevents the formation of a gel phase. C: Unsaturated GPLs promote the formation of packing defects, which are water-accessible voids in membrane hydrophobic regions. Packing defects are more abundant in bent membranes not depicted here. The depth of packing defects tends to be shallower in the presence of PUFA-GPLs (arrows). Packing defects promote membrane binding of protein amphipathic helices, and their depth affects the selectivity of this interaction. Shallower defects accommodate amphipathic helices with less bulky hydrophobic side chains. D: PUFA-GPLs, when present in the convex leaflet of a bent membrane, decrease bending rigidity. E: Acyl-chains of GPLs affect the depth-dependent pressure profile exerted on neighboring molecules (lateral pressure profile), which can affect transmembrane protein functions.

Fluidity.

PUFA-GPLs are thought to increase membrane fluidity. While this is often proposed as a mechanism for PUFA functions, it is rarely shown quantitatively that the gain of fluidity (here defined as the speed of molecules’ diffusion and rotation) by PUFAs (compared with MUFAs) is sufficient to explain a phenomenon. The role of PUFAs in fluidity regulation has even been questioned (84). A recent study combined theoretical and experimental approaches to demonstrate that bacterial respiration is a diffusion-limited process and that MUFAs have quantitatively enough impact on this process (85). In another study, researchers combined reconstitution assays, biophysical measurements, and molecular dynamics simulations, and found that the yeast sensor for membrane unsaturation and transcription factor Mga2 is not affected by fluidity per se but rather by depth-dependent membrane packing (86). This study is a good example of why it is oversimplified to explain all the functions of unsaturated lipids through membrane fluidity. Therefore, future investigations about PUFA functions that rely on fluidity should be conducted carefully, as was done in the aforementioned studies.

Thickness.

The disorder induced by PUFA-GPLs and MUFA-GPLs makes membranes thinner when compared with saturated fatty acid-GPLs (Fig. 3B). Membrane thickness affects the localization and function of transmembrane proteins, which is a possible mechanism for PUFA functions (87). It should be noted that highly unsaturated PUFAs are often longer than MUFAs, thus PUFA-GPLs do not necessarily make membranes thinner than MUFA-GPLs do (88).

Packing defects.

Packing defects are water-accessible voids in the hydrophobic part of membranes, which accumulate in the presence of unsaturated lipids or conical lipids, or upon membrane bending (Fig. 3C). Protein amphipathic helices can interact with membranes through packing defects, which is used as a strategy to sense vesicles with different lipid compositions (89). While GPLs with MUFAs or PUFAs both generate packing defects, PUFA-GPLs make shallower ones, due to their structural flexibility (90). The depth of packing defects affects the binding of amphipathic helices with various side chains; thus PUFA-GPLs might regulate protein-membrane interactions.

Bending rigidity.

PUFA-GPLs make membranes more flexible than MUFA-GPLs (91) (Fig. 3D). This is attributable to the ability to reduce packing defects upon bending (and possibly to thickness). Thus, PUFAs affect processes where membrane bending occurs, as has been shown for endocytosis (90). Bending rigidity is a plausible mechanism for in vivo PUFA functions, as will be explained later. Importantly, only PUFA-GPLs present at the convex leaflet of a bent membrane reduce rigidity (91), which is consistent with the asymmetrical distribution of PUFA-GPLs in the plasma membrane (92), if considering endocytosis.

Protein conformation.

Lateral pressure profiles illustrate local forces that are applied, for example to a membrane protein, depending on the depth in the membrane. Double bond positions in GPLs affect this property, which can change membrane protein conformation (93) (Fig. 3E). The conformational flexibility of PUFAs could also assist dynamic changes in membrane protein conformation (83).

Chemical properties.

Not only the physical properties but also the chemical properties (e.g., oxidative property) of PUFA-GPLs mediate their functions. One example is ferroptosis, which is a form of cell death triggered by peroxidized PUFA-GPLs and is investigated as a potential anti-cancer strategy (94).

Roles of membrane PUFAs

Many functions of PUFA-GPLs were unveiled through LPLAT research (Table 1) (73–76, 95–103). AGPAT3-deficient mice, which have reduced DHA-GPLs, display spermatogenesis defects and retinal dysfunctions (74, 75). Indirect evidence suggests that DHA-GPLs, by reducing bending rigidity, promote the formation of strongly bent membranes during spermatogenesis (for the removal of cytoplasm by Sertoli cells by tubulobulbar complex) and during maturation of rhodopsin-containing retinal disc membranes, although the role of DHA-derived lipid mediators (collectively termed docosanoids) in these processes is also possible. LPCAT3-deficient mice have specific reductions in GPLs containing AA (AA-GPLs) and are neonatally lethal due to enterocyte dysfunction and malnutrition, which are triggered by overaccumulation of triglycerides in the cytosol derived from mother’s milk (73, 100). Liver-specific LPCAT3 deficiency leads to hepatic steatosis under a high-fat diet (100). These phenotypes do not match with those of known eicosanoid receptor- or eicosanoid synthetic enzyme-deficient mice, and basal eicosanoid levels are unchanged in tissues from LPCAT3-deficient mice (73). This suggests that AA-GPLs, and not eicosanoids, are important for triglyceride clearance from enterocytes and hepatocytes. Indeed, triglycerides surrounded by AA-GPLs are better transported by microsomal triglyceride transfer protein, which is critical for secretion of triglycerides and lipoprotein production (73). Therefore, the phenotypes of LPCAT3-deficient mice revealed previously unrecognized functions of PUFA-GPLs at the interface between the cytosol and triglycerides surrounded by endoplasmic reticulum leaflets. Further studies revealed that PUFA-PCs reduce the surface tension at the interface between water and triglycerides and affect the budding of lipid droplets in vitro (104). It will be interesting to investigate the relationship between this observation and the phenotypes of LPCAT3-deficiency. In addition to these triglyceride-related phenotypes, LPCAT3 deficiency in intestinal stem cells causes the overproduction of cholesterol, which further leads to cellular overproliferation (103). This overproliferation enhanced tumor formation in an Apcmin genetic background (a mouse model of colon cancer). While the implication of sterol regulatory element-binding protein 2 was shown in this process, detailed molecular mechanisms connecting LPCAT3, AA-GPLs, and cholesterol regulation remain to be solved. A role of LPCAT3 in adipocyte differentiation was also reported (96). Using 3T3-L1 cells as a model, knockdown of LPCAT3 by shRNA decreased PUFA-GPLs (note that in contrast to other reports, DHA-GPLs also changed) and inhibited adipogenesis. The Wnt/β-catenin pathway was activated upon LPCAT3 knockdown, the inhibition of which restored adipogenesis. This makes a potential link between AA-GPLs and adipogenesis through Wnt/β-catenin. However, regulatory roles of eicosanoids in adipogenesis have also been documented (105), thus it remains to be established whether AA-GPLs regulate the process. MBOAT7 deficiency leads to defects in neuronal migration and neurite outgrowth, leading to abnormal brain morphology in mice (76). Rare mutations in human MBOAT7 also cause neurodevelopmental defects (106). MBOAT7 deficiency decreases AA levels not only in PI but also in phosphoinositides (76). Quantitative changes in total levels of phosphoinositides are also reported (95). It is therefore possible that aberrant signaling by phosphoinositides is involved in the outcomes of MBOAT7 deficiency, but effector proteins that can discriminate phosphoinositide acyl-chains remain to be discovered. In line with this possibility, genetics studies in Caenorhabditis elegans suggest that PI acyl-chains affect PI 3-phosphate signaling (98). Genetic variants of MBOAT7 in humans are reported to affect nonalcoholic fatty liver disease, but inconsistencies are also suggested (107). In mice, liver-specific MBOAT7 knockdown or knockout promotes fatty liver (108, 109). Triglyceride synthesis is promoted under MBOAT7 insufficiency, in part due to the higher turnover of PI (both synthesis and degradation are promoted) and the higher production of diacylglycerol thereof (see “PI cycle” in Fig. 1) (110). It will be interesting to investigate whether phosphoinositides are also involved in the fatty liver phenotype. The investigation of LPLATs also revealed how PUFA-GPLs affect the functions of membrane proteins. By combining PUFA feeding and genetic manipulation of LPLATs in Caenorhabditis elegans, it was found that PUFA-GPLs regulate proteins involved in touch sensation (110). In another study, researchers generated transgenic worms expressing human TRPV4 (transient receptor potential vanilloid 4) to study how PUFA-GPLs affect its function (111). Through a combination of PUFA feeding and manipulation of LPLATs in these worms, they demonstrated a regulatory role of PUFA-GPLs (more specifically, GPLs containing PUFA epoxides) in vasodilation. These studies demonstrate the usefulness of LPLATs as a tool to discriminate the functions of PUFAs as lipid mediators or as membrane components.

Future directions

Although it was difficult to discriminate whether PUFAs execute their functions through PUFA-derivatives or PUFA-GPLs, LPLAT research will probably help with this discrimination and make the functions of PUFA-GPLs clearer. It remains challenging to discover their precise molecular mechanisms, but many useful tools are being developed, such as proteome-wide identification of PUFA-interacting proteins (112), and genome-wide knockout screens (113). It is also important to visualize localization and movement of PUFA derivatives in the cells. Combination of these tools with the manipulation of PUFA-GPLs using LPLATs will be a promising approach to achieve a deep understanding of PUFA-GPL functions. Finally, the existence of PUFA level sensors is suggested in multiple studies (110, 114), which will be important to identify. With all of these issues and others cleared, we will finally have a clear understanding about how PUFAs affect health and disease.
  114 in total

1.  Ligand binding to human prostaglandin E receptor EP4 at the lipid-bilayer interface.

Authors:  Yosuke Toyoda; Kazushi Morimoto; Ryoji Suno; Shoichiro Horita; Keitaro Yamashita; Kunio Hirata; Yusuke Sekiguchi; Satoshi Yasuda; Mitsunori Shiroishi; Tomoko Shimizu; Yuji Urushibata; Yuta Kajiwara; Tomoaki Inazumi; Yunhon Hotta; Hidetsugu Asada; Takanori Nakane; Yuki Shiimura; Tomoya Nakagita; Kyoshiro Tsuge; Suguru Yoshida; Tomoko Kuribara; Takamitsu Hosoya; Yukihiko Sugimoto; Norimichi Nomura; Miwa Sato; Takatsugu Hirokawa; Masahiro Kinoshita; Takeshi Murata; Kiyoshi Takayama; Masaki Yamamoto; Shuh Narumiya; So Iwata; Takuya Kobayashi
Journal:  Nat Chem Biol       Date:  2018-12-03       Impact factor: 15.040

2.  The fatty acid desaturase 2 (FADS2) gene product catalyzes Δ4 desaturation to yield n-3 docosahexaenoic acid and n-6 docosapentaenoic acid in human cells.

Authors:  Hui Gyu Park; Woo Jung Park; Kumar S D Kothapalli; J Thomas Brenna
Journal:  FASEB J       Date:  2015-06-11       Impact factor: 5.191

3.  Dietary docosahexaenoic acid supplementation modulates hippocampal development in the Pemt-/- mouse.

Authors:  Kerry-Ann da Costa; Kiranmai S Rai; Corneliu N Craciunescu; Komal Parikh; Mihai G Mehedint; Lisa M Sanders; Audrey McLean-Pottinger; Steven H Zeisel
Journal:  J Biol Chem       Date:  2009-11-04       Impact factor: 5.157

4.  N-arachidonoyl glycine, an abundant endogenous lipid, potently drives directed cellular migration through GPR18, the putative abnormal cannabidiol receptor.

Authors:  Douglas McHugh; Sherry S J Hu; Neta Rimmerman; Ana Juknat; Zvi Vogel; J Michael Walker; Heather B Bradshaw
Journal:  BMC Neurosci       Date:  2010-03-26       Impact factor: 3.288

Review 5.  Using hydrogen/deuterium exchange mass spectrometry to define the specific interactions of the phospholipase A2 superfamily with lipid substrates, inhibitors, and membranes.

Authors:  Jian Cao; John E Burke; Edward A Dennis
Journal:  J Biol Chem       Date:  2012-12-03       Impact factor: 5.157

Review 6.  Pro-resolving lipid mediators are leads for resolution physiology.

Authors:  Charles N Serhan
Journal:  Nature       Date:  2014-06-05       Impact factor: 49.962

Review 7.  Ferroptosis: A Regulated Cell Death Nexus Linking Metabolism, Redox Biology, and Disease.

Authors:  Brent R Stockwell; José Pedro Friedmann Angeli; Hülya Bayir; Ashley I Bush; Marcus Conrad; Scott J Dixon; Simone Fulda; Sergio Gascón; Stavroula K Hatzios; Valerian E Kagan; Kay Noel; Xuejun Jiang; Andreas Linkermann; Maureen E Murphy; Michael Overholtzer; Atsushi Oyagi; Gabriela C Pagnussat; Jason Park; Qitao Ran; Craig S Rosenfeld; Konstantin Salnikow; Daolin Tang; Frank M Torti; Suzy V Torti; Shinya Toyokuni; K A Woerpel; Donna D Zhang
Journal:  Cell       Date:  2017-10-05       Impact factor: 41.582

8.  LPCAT3 deficiency in hematopoietic cells alters cholesterol and phospholipid homeostasis and promotes atherosclerosis.

Authors:  Charles Thomas; Antoine Jalil; Charlène Magnani; Minako Ishibashi; Ronan Queré; Thibaut Bourgeois; Victoria Bergas; Louise Ménégaut; Danish Patoli; Naig Le Guern; Jérôme Labbé; Thomas Gautier; Jean Paul Pais de Barros; Laurent Lagrost; David Masson
Journal:  Atherosclerosis       Date:  2018-05-18       Impact factor: 5.162

9.  Fatty acid transport protein 2 reprograms neutrophils in cancer.

Authors:  Filippo Veglia; Vladimir A Tyurin; Maria Blasi; Alessandra De Leo; Andrew V Kossenkov; Laxminarasimha Donthireddy; Tsun Ki Jerrick To; Zach Schug; Subhasree Basu; Fang Wang; Emanuela Ricciotti; Concetta DiRusso; Maureen E Murphy; Robert H Vonderheide; Paul M Lieberman; Charles Mulligan; Brian Nam; Neil Hockstein; Gregory Masters; Michael Guarino; Cindy Lin; Yulia Nefedova; Paul Black; Valerian E Kagan; Dmitry I Gabrilovich
Journal:  Nature       Date:  2019-04-17       Impact factor: 49.962

10.  Lipase Treatment of Dietary Krill Oil, but Not Fish Oil, Enables Enrichment of Brain Eicosapentaenoic Acid and Docosahexaenoic Acid.

Authors:  Poorna C R Yalagala; Dhavamani Sugasini; Steve B Zaldua; Leon M Tai; Papasani V Subbaiah
Journal:  Mol Nutr Food Res       Date:  2020-05-04       Impact factor: 5.914

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  14 in total

1.  Volatile Organic Compounds Frequently Identified after Hyperbaric Hyperoxic Exposure: The VAPOR Library.

Authors:  Feiko J M de Jong; Paul Brinkman; Thijs T Wingelaar; Pieter-Jan A M van Ooij; Rob A van Hulst
Journal:  Metabolites       Date:  2022-05-23

2.  Identification of Genomic Loci and Candidate Genes Related to Seed Tocopherol Content in Soybean.

Authors:  Suprio Ghosh; Shengrui Zhang; Muhammad Azam; Kwadwo Gyapong Agyenim-Boateng; Jie Qi; Yue Feng; Yecheng Li; Jing Li; Bin Li; Junming Sun
Journal:  Plants (Basel)       Date:  2022-06-27

Review 3.  Acyl-CoA synthetases as regulators of brain phospholipid acyl-chain diversity.

Authors:  Regina F Fernandez; Jessica M Ellis
Journal:  Prostaglandins Leukot Essent Fatty Acids       Date:  2020-09-15       Impact factor: 4.006

4.  Mapping membrane lipids in the developing and adult mouse retina under physiological and pathological conditions using mass spectrometry.

Authors:  Fumie Hamano; Hiroshi Kuribayashi; Toshiro Iwagawa; Asano Tsuhako; Katsuyuki Nagata; Hiroshi Sagara; Takao Shimizu; Hideo Shindou; Sumiko Watanabe
Journal:  J Biol Chem       Date:  2021-01-16       Impact factor: 5.486

5.  Inadequate Content of Docosahexaenoic Acid (DHA) of Donor Human Milk for Feeding Preterm Infants: A Comparison with Mother's Own Milk at Different Stages of Lactation.

Authors:  Félix Castillo; Félix-Joel Castillo-Ferrer; Begoña Cordobilla; Joan Carles Domingo
Journal:  Nutrients       Date:  2021-04-15       Impact factor: 5.717

6.  Increased plasma disequilibrium between pro- and anti-oxidants during the early phase resuscitation after cardiac arrest is associated with increased levels of oxidative stress end-products.

Authors:  Muhammad Shoaib; Nancy Kim; Rishabh C Choudhary; Tai Yin; Koichiro Shinozaki; Lance B Becker; Junhwan Kim
Journal:  Mol Med       Date:  2021-10-24       Impact factor: 6.354

7.  Edible Far Eastern Ferns as a Dietary Source of Long-Chain Polyunsaturated Fatty Acids.

Authors:  Eduard V Nekrasov; Vasily I Svetashev
Journal:  Foods       Date:  2021-05-28

8.  Changes in Erythrocyte Omega-3 Fatty Acids in German Employees upon Dietary Advice by Corporate Health.

Authors:  Dietrich Rein; Matthias Claus; Wolfgang Frosch; Winfried März; Stefan Lorkowski; Stefan Webendoerfer; Thorsten Schreiner
Journal:  Nutrients       Date:  2020-10-25       Impact factor: 5.717

Review 9.  Modification of High-Density Lipoprotein Functions by Diet and Other Lifestyle Changes: A Systematic Review of Randomized Controlled Trials.

Authors:  Albert Sanllorente; Camille Lassale; Maria Trinidad Soria-Florido; Olga Castañer; Montserrat Fitó; Álvaro Hernáez
Journal:  J Clin Med       Date:  2021-12-15       Impact factor: 4.241

10.  CD36 maintains the gastric mucosa and associates with gastric disease.

Authors:  Miriam Jacome-Sosa; Zhi-Feng Miao; Vivek S Peche; Edward F Morris; Ramkumar Narendran; Kathryn M Pietka; Dmitri Samovski; Hei-Yong G Lo; Terri Pietka; Andrea Varro; Latisha Love-Gregory; James R Goldenring; Ondrej Kuda; Eric R Gamazon; Jason C Mills; Nada A Abumrad
Journal:  Commun Biol       Date:  2021-11-02
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