| Literature DB >> 32448049 |
Yanrui Wu1,2, Hongju Yang3, Chunjie Xiao2.
Abstract
OBJECTIVE: Prolylcarboxypeptidase (PRCP) is a negative regulator of the pressor actions of the renin-angiotensin-aldosterone system. It is also involved in the kallikrein-kinin system. This gene has an important role in blood pressure (BP) regulation.Entities:
Keywords: Essential hypertension; PRCP; Yi minority; isolated population; polymorphisms
Mesh:
Substances:
Year: 2020 PMID: 32448049 PMCID: PMC7249571 DOI: 10.1177/1470320320919586
Source DB: PubMed Journal: J Renin Angiotensin Aldosterone Syst ISSN: 1470-3203 Impact factor: 1.636
Figure 1.The structure of the prolylcarboxypeptidase gene and relative positions of 11 tag single-nucleotide polymorphisms.
UTR: untranslated region.
Primers and restriction enzymes used in prolylcarboxypeptidase gene single-nucleotide polymorphism identification.
| SNP | Primers | Annealing temperature (°C) | Product (bp) | Enzyme |
|---|---|---|---|---|
| rs12290550 | F: 5′-CAGTCTTATGGGGAATAGGGA-3′ | 57 | 189 | BamHI |
| R: 5′-TAGTCTGCGGTGATAGGGATC-3′ | ||||
| rs17144371 | F: 5′-AAACACTCTTTGCTTTACTGCTA-3′ | 56 | 347 | TaqI |
| R: 5′-ATGGTCTTTCCGACTTTACTACT-3′ | ||||
| rs6592086 | F: 5′-TGGAAGGAAGGTGGAGTTTAG-3′ | 56 | 129 | SacI |
| R: 5′-TGCTCTCTGATCTTGTCCGA-3′ | ||||
| rs7104980 | F: 5′-CACGGAGTACTTAGATGGTCGA-3′ | 56 | 117 | SalI |
| R: 5′-CGTATTTCCAGTTGTTTAGCAC-3′ | ||||
| rs2298668 | F: 5′-AAGTTATCTCACAGTGGGGCA-3′ | 57 | 302 | BmgT120I |
| R: 5′-GAGTGCTCTTTTTGTTCTGGC-3′ | ||||
| rs13306597 | F: 5′-AGACAGAAGCCAGAAACCTCA-3′ | 56 | 115 | VspI |
| R: 5′-AAGTGCATTTGTACTGGAGATTAA-3′ | ||||
| rs10792653 | F: 5′-AAGGATAGTCCACCATTGCC-3′ | 56 | 203 | HaeIII |
| R: 5′-TGTGAAGAATAAATGATCTGTAAG-3′ | ||||
| rs4084193 | F: 5′-CCTCCACCACCAGAAGAAG-3′ | 56 | 184 | MboI |
| R: 5′-TTTATGATATTTGATTTGTCACAGAT-3′ | ||||
| rs4759 | F: 5′-ATCACCCTCTATTCTATCTCAACT-3′ | 56 | 182 | PstI |
| R: 5′-GATGAGAGATTTCTATGACACTGC-3′ | ||||
| rs3750931 | F: 5′-CACTTGCTCTTACCGTCATCAC-3′ | 57 | 175 | RsaI |
| R: 5′-GGGAAAGCAGCACTGAGGTA-3′ | ||||
| rs7272 | F: 5′-GCCAACATCCCAGAACTAAGA-3′ | 57 | 317 | MspI |
| R: 5′-CCCATTTGTAAGTCCCCATC-3′ |
F: forward primer; R: reverse primer; SNP: single-nucleotide polymorphism.
Characteristics of the study groups.
| Characteristics | Control group | Hypertension group |
|---|---|---|
| Gender (male/female) | 175/137 | 181/122 |
| Age (years) | 42.8 ± 10.4 | 44.2 ± 9.7 |
| BMI (kg/m2) | 21.2 ± 2.1 | 23.1 ± 2.2 |
| SBP (mm Hg) | 101.3 ± 5.7 | 147.7 ± 16.1 |
| DBP (mm Hg) | 67.8 ± 3.9 | 95.8 ± 9.9 |
BMI: body mass index; DBP: diastolic blood pressure; SBP: systolic blood pressure.
Note: values are expressed as mean ± SD; *p < 0.01, statistical difference between control and hypertension groups.
Genotype and allele distributions of single-nucleotide polymorphisms between hypertension patients and controls.
| Variant | Allele[ | Group | Genotype (frequency)[ |
| Allele (frequency)[ |
| |||
|---|---|---|---|---|---|---|---|---|---|
| 1/1 | 1/2 | 2/2 | 1 | 2 | |||||
| rs12290550 | G/T | Control | 192 (0.615) | 97 (0.311) | 23 (0.074) | 481 (0.771) | 143 (0.229) | ||
| Case | 135 (0.446) | 123 (0.406) | 45 (0.149) | 0.5 × 10−4 | 393 (0.649) | 213 (0.351) | 0.2 × 10−4 | ||
| rs17144371 | A/C | Control | 299 (0.958) | 13 (0.042) | 0 (0.000) | 611 (0.979) | 13 (0.021) | ||
| Case | 289 (0.954) | 14 (0.046) | 0 (0.000) | 0.784 | 592 (0.977) | 14 (0.023) | 0.786 | ||
| rs6592086 | G/C | Control | 232 (0.744) | 71 (0.228) | 9 (0.029) | 535 (0.857) | 89 (0.143) | ||
| Case | 238 (0.785) | 62 (0.205) | 3 (0.010) | 0.169 | 538 (0.888) | 68 (0.112) | 0.110 | ||
| rs7104980 | C/G | Control | 151 (0.484) | 127 (0.407) | 34 (0.109) | 429 (0.688) | 195 (0.313) | ||
| Case | 122 (0.403) | 144 (0.475) | 37 (0.122) | 0.126 | 388 (0.640) | 218 (0.360) | 0.079 | ||
| rs2298668 | A/C | Control | 244 (0.782) | 62 (0.199) | 6 (0.019) | 550 (0.881) | 74 (0.119) | ||
| Case | 248 (0.818) | 51 (0.168) | 4 (0.013) | 0.504 | 547 (0.903) | 59 (0.097) | 0.231 | ||
| rs13306597 | C/T | Control | 207 (0.663) | 90 (0.288) | 15 (0.048) | 504 (0.808) | 120 (0.192) | ||
| Case | 223 (0.736) | 75 (0.248) | 5 (0.017) | 0.033 | 521 (0.860) | 85 (0.140) | 0.014 | ||
| rs10792653 | T/G | Control | 137 (0.439) | 136 (0.436) | 39 (0.125) | 410 (0.657) | 214 (0.343) | ||
| Case | 113 (0.373) | 150 (0.495) | 40 (0.132) | 0.238 | 376 (0.620) | 230 (0.380) | 0.182 | ||
| rs4084193 | A/C | Control | 218 (0.699) | 84 (0.269) | 10 (0.032) | 520 (0.833) | 104 (0.167) | ||
| Case | 230 (0.759) | 69 (0.228) | 4 (0.013) | 0.120 | 529 (0.873) | 77 (0.127) | 0.050 | ||
| rs4759 | A/G | Control | 85 (0.272) | 155 (0.497) | 72 (0.231) | 325 (0.521) | 299 (0.479) | ||
| Case | 86 (0.284) | 156 (0.515) | 61 (0.201) | 0.675 | 328 (0.541) | 278 (0.459) | 0.473 | ||
| rs3750931 | C/G | Control | 274 (0.878) | 34 (0.109) | 4 (0.013) | 582 (0.933) | 42 (0.067) | ||
| Case | 264 (0.871) | 35 (0.116) | 4 (0.013) | 0.124 | 563 (0.929) | 43 (0.071) | 0.801 | ||
| rs7272 | A/G | Control | 139 (0.446) | 140 (0.449) | 33 (0.106) | 418 (0.670) | 206 (0.330) | ||
| Case | 165 (0.545) | 113 (0.373) | 25 (0.083) | 0.048 | 443 (0.731) | 163 (0.269) | 0.019 | ||
The major allele is referred to as allele 1 and the minor allele as allele 2.
Associations between single-nucleotide polymorphisms and blood pressure levels in the Yi minority.
| SNP | Genotype ( | SBP |
| DBP |
|
|---|---|---|---|---|---|
| rs12290550 | TT (68) | 130.63 ± 20.83 | 86.49 ± 15.87 | ||
| GT (220) | 127.48 ± 26.38 | 83.52 ± 16.61 | |||
| GG (327) | 120.49 ± 25.20 | 0.001 | 79.33 ± 16.26 | 0.0005 | |
| rs17144371 | AC (27) | 123.33 ± 24.11 | 83.26 ± 17.29 | ||
| AA (588) | 124.15 ± 25.55 | 0.871 | 81.54 ± 16.50 | 0.598 | |
| rs6592086 | CC (12) | 115.83 ± 25.19 | 74.00 ± 12.00 | ||
| CG (133) | 123.05 ± 24.72 | 81.51 ± 16.90 | |||
| GG (470) | 124.62 ± 25.69 | 0.430 | 81.84 ± 16.49 | 0.267 | |
| rs7104980 | GG (71) | 123.69 ± 24.75 | 81.83 ± 16.43 | ||
| CG (271) | 126.41 ± 26.84 | 82.76 ± 16.94 | |||
| CC (273) | 121.94 ± 24.11 | 0.122 | 80.43 ± 16.10 | 0.259 | |
| rs2298668 | CC (10) | 121.10 ± 23.51 | 78.50 ± 17.33 | ||
| AC (113) | 122.97 ± 26.80 | 80.84 ± 17.88 | |||
| AA (492) | 124.43 ± 25.23 | 0.801 | 81.86 ± 16.20 | 0.701 | |
| rs13306597 | TT (20) | 108.55 ± 20.00 | 73.8 ± 16.32 | ||
| CT (165) | 122.05 ± 25.24 | 80.97 ± 17.21 | |||
| CC (430) | 125.62±25.53 | 0.006 | 82.23±13.21 | 0.070 | |
| rs10792653 | GG (79) | 123.61±24.42 | 81.34±17.09 | ||
| GT (286) | 125.70±25.77 | 82.81±16.22 | |||
| TT (250) | 122.45±25.42 | 0.331 | 81.62±16.52 | 0.220 | |
| rs4084193 | CC (14) | 112.93±23.83 | 71.36±11.83 | ||
| AC (153) | 122.41±24.78 | 80.64±16.87 | |||
| AA (448) | 125.04±25.69 | 0.137 | 82.27±16.43 | 0.036 | |
| rs4759 | GG (133) | 122.29±25.33 | 80.47±16.50 | ||
| AG (311) | 124.74±25.98 | 81.91±17.29 | |||
| AA (171) | 124.38±24.69 | 0.640 | 81.98±15.11 | 0.666 | |
| rs3750931 | GG (8) | 124.63±24.48 | 86.63±19.21 | ||
| CG (69) | 124.33±24.19 | 80.25±15.06 | |||
| CC (538) | 124.07±25.68 | 0.995 | 81.72±16.67 | 0.541 | |
| rs7272 | GG (58) | 119.45±25.16 | 80.41±17.86 | ||
| AG (253) | 122.27±25.25 | 80.62±16.83 | |||
| AA (304) | 126.53±25.53 | 0.049 | 82.68±15.97 | 0.290 |
DBP: diastolic blood pressure; SBP: systolic blood pressure; SNP: single-nucleotide polymorphism.
Logistic regression analysis under genetic models.
| Variant | Allele[ | Genetic model | OR[ |
| |
|---|---|---|---|---|---|
| rs12290550 | G/T | Dominant model | ½ + 2/2 vs. 1/1 | 2.05 (1.48–2.84) | 0.2 × 10−4 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | 2.20 (1.29–3.76) | 0.004 | ||
| Multiplicative model | 2 vs. 1 | 1.85 (1.44–2.39) | 0.2 × 10−5 | ||
| rs17144371 | A/C | Dominant model | 1/2 + 2/2 vs. 1/1 | 1.14 (0.52–2.47) | 0.748 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | — | — | ||
| Multiplicative model | 2 vs. 1 | 1.13 (0.53-–2.44) | 0.751 | ||
| rs6592086 | G/C | Dominant model | 1/2 + 2/2 vs. 1/1 | 0.80 (0.55–1.16) | 0.231 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | 0.32 (0.09–1.22) | 0.095 | ||
| Multiplicative model | 2 vs. 1 | 0.76 (0.54–1.07) | 0.112 | ||
| rs7104980 | C/G | Dominant model | 1/2 + 2/2 vs. 1/1 | 1.46 (1.06–2.02) | 0.021 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | 1.18 (0.72–1.94) | 0.515 | ||
| Multiplicative model | 2 vs. 1 | 1.28 (1.01–1.62) | 0.043 | ||
| rs2298668 | A/C | Dominant model | 1/2 + 2/2 vs. 1/1 | 0.81 (0.54–1.20) | 0.289 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | 0.69 (0.19–2.49) | 0.574 | ||
| Multiplicative model | 2 vs. 1 | 0.81 (0.56–1.17) | 0.260 | ||
| rs13306597 | C/T | Dominant model | 1/2 + 2/2 vs. 1/1 | 0.72 (0.51–1.01) | 0.060 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | 0.32 (0.11–0.89) | 0.029 | ||
| Multiplicative model | 2 vs. 1 | 0.69 (0.51–0.93) | 0.016 | ||
| rs10792653 | T/G | Dominant model | 1/2 + 2/2 vs. 1/1 | 1.34 (0.97–1.85) | 0.080 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | 1.04 (0.65–1.67) | 0.868 | ||
| Multiplicative model | 2 vs. 1 | 1.17 (0.93–1.48) | 0.177 | ||
| rs4084193 | A/C | Dominant model | 1/2 + 2/2 vs. 1/1 | 0.74 (0.52–1.06) | 0.097 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | 0.39 (0.12–1.27) | 0.118 | ||
| Multiplicative model | 2 vs. 1 | 0.73 (0.53–1.00) | 0.051 | ||
| rs4759 | A/G | Dominant model | 1/2 + 2/2 vs. 1/1 | 0.95 (0.66–1.35) | 0.771 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | 0.83 (0.56–1.22) | 0.334 | ||
| Multiplicative model | 2 vs. 1 | 0.92 (0.73–1.15) | 0.455 | ||
| rs3750931 | C/G | Dominant model | 1/2 + 2/2 vs. 1/1 | 1.03 (0.64–1.67) | 0.903 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | 1.03 (0.25–4.19) | 0.964 | ||
| Multiplicative model | 2 vs. 1 | 1.03 (0.66–1.60) | 0.900 | ||
| rs7272 | A/G | Dominant model | 1/2 + 2/2 vs. 1/1 | 0.65 (0.47–0.90) | 0.009 |
| Recessive model | 2/2 vs. 1/1 + 1/2 | 0.76 (0.44–1.31) | 0.320 | ||
| Multiplicative model | 2 vs. 1 | 0.73 (0.57–0.94) | 0.014 | ||
CI: confidence interval; OR: odds ratio.
The major allele is referred to as allele 1 and the minor allele as allele 2.
OR estimated by logistic regression analysis, adjusted for gender, age and body mass index.
The distributions of haplotypes and logistic regression analysis.
| Name | Haplotype | Control (frequency) | Case (frequency) | OR (95% CI) |
|
|---|---|---|---|---|---|
| H1 | GACGCTGCGCG | 42 (0.068) | 24 (0.040) | 0.59 (0.35–0.98) | 0.040 |
| H2 | GAGCACTAACA | 228 (0.365) | 176 (0.291) | 0.71 (0.55–0.92) | 0.009 |
| H3 | GAGCACTAAGA | 7 (0.012) | 10 (0.017) | 1.47 (0.57–3.80) | 0.424 |
| H4 | GAGCACTAGCA | 13 (0.020) | 15 (0.025) | 1.30 (0.61–2.77) | 0.500 |
| H5 | GAGCACTAGCG | 62 (0.100) | 43 (0.070) | 0.69 (0.46–1.05) | 0.081 |
| H6 | GAGCATGCGGG | 15 (0.025) | 10 (0.016) | 0.66 (0.29–1.50) | 0.320 |
| H7 | TAGCACTAACA | 11 (0.017) | 43 (0.071) | 4.53 (2.29–8.93) | 0.2 × 10−5 |
| H8 | TAGGACGAGCA | 54 (0.086) | 77 (0.128) | 1.61 (1.11–2.34) | 0.011 |
| H9 | TAGGACTAACA | 10 (0.016) | 9 (0.015) | 0.99 (0.40–2.46) | 0.988 |
| H10 | GAGGACGAGCA | 19 (0.031) | 8 (0.012) | 0.40 (0.17–0.95) | 0.031 |
| H11 | GAGCACTAACG | 8 (0.013) | 7 (0.012) | 0.96 (0.35–2.62) | 0.935 |
| H12 | TAGCACTAACG | 9 (0.015) | 5 (0.008) | 0.55 (0.19–1.65) | 0.281 |
CI: confidence interval; OR: odds ratio.
Note: the haplotype structure was rs12290550 (G/T), rs17144371 (A/C), rs6592086 (G/C), rs7104980 (C/G), rs2298668 (A/C), rs13306597 (C/T), rs10792653 (T/G), rs4084193 (A/C), rs4759 (A/G), rs3750931 (C/G) and rs7272 (A/G); haplotypes with frequencies < 0.01 were excluded.