| Literature DB >> 32435715 |
Komal Agrawal1, Pradeep Verma1.
Abstract
Multicopper oxidases (MCOs) has a unique feature of having the presence of four Cu atoms arranged into three (Type I, II and III) spectral classification. MCOs laccase due to its broad range of substrate specificity has numerous biotechnological applications. The two types of laccases include the typical blue and the atypical white, yellow laccases which have been isolated from diverse geographical locations globally. In the present study laccases were identified using Liquid Chromatograph Mass Spectrometer Studies (LCMS) study where blue laccase exhibited homology with Trametes villosa Q99044 and Q99046 and white, yellow laccase exhibited homology with Myrothecium verrucaria OX = 1859699; Q12737 and Trametes versicolor Q12717 respectively. The spectral comparison between laccases were determined via spectroscopic analysis where UV-spectra of blue laccase from Trametes versicolor had a peak at 605 nm (Type I Cu atom) whereas in case of white and yellow laccases the peak was absent and in addition had an absorption peak at 400nm. It was followed by X-Ray Diffraction (XRD) analysis of proteins where α-helix (10°) and β-sheet (22°) structure were observed in case of all the three laccases. However, the intensity of α-helix in white and yellow laccase was stronger as compared to the blue laccase whereas the intensity of β-sheet was stronger in case of blue laccase as compared to other two laccases. Further, Fourier-transform infrared spectroscopy (FTIR) analysis was performed which enabled the analysis of proteins where α-helix (1650-1658 cm-1), β-sheets (1620-1640 cm-1), amide I (1700-1600 cm-1) amide II (bands at under 1400 cm-1) and amide A, B (bands above 3000 cm-1).Entities:
Keywords: Bioinformatics; Enzymology; FTIR; LCMS; Laccase; Microbiology; Microorganism; Mycology; Proteomics; Spectroscopy; Structural biology; UV-Spectra; XRD
Year: 2020 PMID: 32435715 PMCID: PMC7229520 DOI: 10.1016/j.heliyon.2020.e03972
Source DB: PubMed Journal: Heliyon ISSN: 2405-8440
Figure 13D ribbon representation of various laccases as obtained after LCMS study using the sequence homology (a–b) blue; (c) white; (d) yellow.
Figure 2The UV-visible spectra of various laccases from (a) Stropharia sp. ITCC 8442 (b) T versicolor and (c) M verrucaria ITCC 8447 (Figure 2a has been reproduced/adapted from Agrawal and Verma [19] with permission from Elsevier; Figure 2c has been reproduced/adapted from Agrawal et al [21] with permission from Elsevier).
The peaks detected in the XRD analysis of the blue, white and yellow laccases.
Figure 3The XRD of various laccases from T versicolor, M verrucaria ITCC 8447 and Stropharia sp. ITCC 8442. (The XRD of white laccase has been reproduced/adapted from Agrawal et al [21] with permission from Elsevier).
Figure 4The FTIR of various laccases from T versicolor, M verrucaria ITCC 8447 and Stropharia sp. ITCC 8442 (The FTIR of white laccase has been reproduced/adapted from Agrawal et al [21] with permission from Elsevier).
Figure 5The SDS-PAGE of (b) blue laccase (d) white laccase and silver staining of (f) yellow laccase where (a, c, e) represents the protein ladder (See Supplementary Figure 1 for full image).
The distinguished features of various multicopper oxidase laccases.
| White Laccase | pH | Temperature (°C) | Molecular weight (kDa) | Reference |
|---|---|---|---|---|
| 8–11.5 | 30–50 | 62 | [ | |
| 4.6–6.5 | 35–55 | - | [ | |
| 2–7 | 20–60 | 66 | [ | |
| 7–9 | 30–40 | ~63–75 | [ | |
| Yel 1p | 4–12 | Up to 40 | 55 | [ |
| Yel 3p | 5–9 | |||
| 5–8 | 25–40 | 63 | [ | |
| 2.5–4 | 0–50 | 97 | [ | |