Literature DB >> 32424580

Development of a real-time loop-mediated isothermal amplification method for the detection of severe fever with thrombocytopenia syndrome virus.

Jae Woong Lee1, Yu-Jung Won1, Lae Hyung Kang1, Sung-Geun Lee2, Seung-Won Park3, Soon-Young Paik4.   

Abstract

Severe fever with thrombocytopenia syndrome (SFTS) is being reported annually in South Korea since its first detection there in 2010. The causal agent is a negative-strand RNA virus 80-100 nm in diameter. It causes fever, thrombocytopenia, leukocytopenia, gastrointestinal symptoms, and neural symptoms. The mortality rate of SFTS was 32.6% among 172 cases reported from 2012 to 2015 in South Korea. Thus, is necessary to develop an effective diagnostic method that selectively identifies the isolates circulating in South Korea. The real-time reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay is a simple, rapid, and sensitive approach for molecular diagnosis. Here, we designed novel primers for this assay and found that the technique had very high specificity, sensitivity, and efficiency. This real-time RT-LAMP approach using the novel primers developed herein can be applied for early diagnosis of SFTSV strains in South Korea to reduce the mortality rate of SFTS.

Entities:  

Keywords:  molecular diagnostics; reverse transcription loop-mediated isothermal amplification (LAMP); severe fever with thrombocytopenia syndrome (STFS); virus detection

Mesh:

Substances:

Year:  2020        PMID: 32424580      PMCID: PMC7232587          DOI: 10.1007/s12275-020-0109-1

Source DB:  PubMed          Journal:  J Microbiol        ISSN: 1225-8873            Impact factor:   3.422


  37 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Sensitive and specific PCR systems for detection of both Chinese and Japanese severe fever with thrombocytopenia syndrome virus strains and prediction of patient survival based on viral load.

Authors:  Tomoki Yoshikawa; Shuetsu Fukushi; Hideki Tani; Aiko Fukuma; Satoshi Taniguchi; Shoichi Toda; Yukie Shimazu; Koji Yano; Toshiharu Morimitsu; Katsuyuki Ando; Akira Yoshikawa; Miki Kan; Nobuyuki Kato; Takumi Motoya; Tsuyoshi Kuzuguchi; Yasuhiro Nishino; Hideo Osako; Takahiro Yumisashi; Kouji Kida; Fumie Suzuki; Hirokazu Takimoto; Hiroaki Kitamoto; Ken Maeda; Toru Takahashi; Takuya Yamagishi; Kazunori Oishi; Shigeru Morikawa; Masayuki Saijo; Masayuki Shimojima
Journal:  J Clin Microbiol       Date:  2014-07-02       Impact factor: 5.948

3.  [Expression of structural and non-structural proteins of severe fever with thrombocytopenia syndrome bunyavirus].

Authors:  Jing Lu; Chuan Li; Fu-Shun Zhang; Wei Wu; Quan-Fu Zhang; Li Zhang; Tao Wang; Qin Wang; Pei-Hong Qiu; Mi-Fang Liang; De-Xin Li
Journal:  Bing Du Xue Bao       Date:  2011-11

4.  Visual detection of pandemic influenza A H1N1 Virus 2009 by reverse-transcription loop-mediated isothermal amplification with hydroxynaphthol blue dye.

Authors:  Xue-Jun Ma; Yue-Long Shu; Kai Nie; Meng Qin; Da-Yan Wang; Rong-Bao Gao; Miao Wang; Le-Ying Wen; Feng Han; Shu-Mei Zhou; Xiang Zhao; Yan-Hui Cheng; De-Xin Li; Xiao-Ping Dong
Journal:  J Virol Methods       Date:  2010-04-08       Impact factor: 2.014

5.  Isolation, characterization, and phylogenic analysis of three new severe fever with thrombocytopenia syndrome bunyavirus strains derived from Hubei Province, China.

Authors:  Yanfang Zhang; Shu Shen; Junming Shi; Zhengyuan Su; Mingyue Li; Wenjing Zhang; Mengmeng Li; Zhihong Hu; Cheng Peng; Xin Zheng; Fei Deng
Journal:  Virol Sin       Date:  2017-02-24       Impact factor: 4.327

6.  Early diagnosis of novel SFTS bunyavirus infection by quantitative real-time RT-PCR assay.

Authors:  Yulan Sun; Mifang Liang; Jing Qu; Cong Jin; Quanfu Zhang; Jiandong Li; Xiaolin Jiang; Qin Wang; Jing Lu; Wen Gu; Shuo Zhang; Chuan Li; Xianjun Wang; Faxian Zhan; Wenqing Yao; Zhenqiang Bi; Shiwen Wang; Dexin Li
Journal:  J Clin Virol       Date:  2011-10-22       Impact factor: 3.168

7.  Molecular genomic characterization of severe fever with thrombocytopenia syndrome virus isolates from South Korea.

Authors:  Yu Jung Won; Lae Hyung Kang; Sung Geun Lee; Seung Won Park; Jae Ik Han; Soon Young Paik
Journal:  J Microbiol       Date:  2019-08-03       Impact factor: 3.422

8.  Severe Fever with Thrombocytopenia Syndrome in South Korea, 2013-2015.

Authors:  Seong Jin Choi; Sang-Won Park; In-Gyu Bae; Sung-Han Kim; Seong Yeol Ryu; Hyun Ah Kim; Hee-Chang Jang; Jian Hur; Jae-Bum Jun; Younghee Jung; Hyun-Ha Chang; Young Keun Kim; Jongyoun Yi; Kye-Hyung Kim; Jeong-Hwan Hwang; Yeon-Sook Kim; Hye Won Jeong; Kyoung-Ho Song; Wan Beom Park; Eu Suk Kim; Myoung-Don Oh
Journal:  PLoS Negl Trop Dis       Date:  2016-12-29

9.  Severe Fever with Thrombocytopenia Syndrome Virus Infection, South Korea, 2010.

Authors:  Young Ree Kim; Yeojun Yun; Seung Geon Bae; Dahee Park; Suhyun Kim; Jae Myun Lee; Nam-Hyuk Cho; Yang Soo Kim; Keun Hwa Lee
Journal:  Emerg Infect Dis       Date:  2018-11       Impact factor: 6.883

Review 10.  Antiviral Drugs Against Severe Fever With Thrombocytopenia Syndrome Virus Infection.

Authors:  Mutsuyo Takayama-Ito; Masayuki Saijo
Journal:  Front Microbiol       Date:  2020-02-11       Impact factor: 5.640

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  3 in total

1.  Development of an RT-LAMP Assay for the Rapid Detection of SFTS Virus.

Authors:  Shiori Sano; Shuetsu Fukushi; Souichi Yamada; Shizuko Harada; Hitomi Kinoshita; Satoko Sugimoto; Tomoki Yoshikawa; Takeshi Kurosu; Yuki Takamatsu; Masayuki Shimojima; Shoichi Toda; Yuka Hamada; Naoki Fujisawa; Takayuki Sugimoto; Masayuki Saijo
Journal:  Viruses       Date:  2021-04-16       Impact factor: 5.048

2.  CRISPR/Cas12a Technology Combined With RPA for Rapid and Portable SFTSV Detection.

Authors:  Mengqian Huang; Sihua Liu; Yanan Xu; Aqian Li; Wei Wu; Mifang Liang; Guoyu Niu; Zhiyun Wang; Tao Wang
Journal:  Front Microbiol       Date:  2022-01-25       Impact factor: 5.640

3.  Development of monoclonal antibody based IgG and IgM ELISA for diagnosis of severe fever with thrombocytopenia syndrome virus infection.

Authors:  Mei Zhang; Yanhua Du; Li Yang; Lin Zhan; Bin Yang; Xueyong Huang; Bianli Xu; Koichi Morita; Fuxun Yu
Journal:  Braz J Infect Dis       Date:  2022-07-11       Impact factor: 3.257

  3 in total

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