| Literature DB >> 32406605 |
Olga Matsarskaia1, Felix Roosen-Runge2,3, Frank Schreiber4.
Abstract
Ions are ubiquitous in nature. They play a key role for many biological processes on the molecular scale, from molecular interactions, to mechanical properties, to folding, to self-organisation and assembly, to reaction equilibria, toEntities:
Keywords: biomolecules; biophysical chemistry; charge-mediated interactions; multivalent ions; phase behaviour
Mesh:
Substances:
Year: 2020 PMID: 32406605 PMCID: PMC7496725 DOI: 10.1002/cphc.202000162
Source DB: PubMed Journal: Chemphyschem ISSN: 1439-4235 Impact factor: 3.102
Figure 1Stern model combining the rigid (Helmholtz) and diffuse (Gouy‐Chapman) double layer models. The grey shaded area represents a surface immersed into bulk liquid (blue continuum). The red circles on the shaded area represent negatively charged particles, the green circles illustrate positively charged ones. The potential ψ decays linearly between the surface (ψ) and the outer Helmholtz layer (ψ at a distance d). At d, the diffuse double‐layer begins and ψ decays exponentially, asymptotically approaching a value ψ at long distances from the charged surface. The thickness of the diffuse double‐layer corresponds to the Debye screening length (eqn. 1). Figure reproduced and adapted from Refs. [38] and [39].
Figure 2DLVO potential for varying salt concentration c. With increasing c, the potential changes from repulsive to attractive. The aggregation barrier reflects the charge stabilisation behaviour that becomes weaker due to charge screening.
Figure 3Part of the Hofmeister series for anions and cations. Ions on the left hand side of the series destabilise solutions and “salt out” solutes, whereas ions on the right stabilise (“salt in”) solutions.
Selected ion properties. Unless indicated otherwise, the ionic radii are taken from Table 2.2 in Ref. 88. a indicates an approximate value,88 b from Ref. 89; c from Ref. 90; d from Ref. 91 e from Ref. 92.
|
Ion |
Radius in solution (nm) |
Hydration number |
Electron configuration |
|---|---|---|---|
|
Na+ |
0.102 |
3.5 |
[Ne] 3s0 |
|
K+ |
0.138 |
2.6 |
[Ar] 4s0 |
|
Mg2+ |
0.072 |
10.0 |
[Ne] 3s0 |
|
Ca2+ |
0.100 |
7.2 |
[Ar] 4s0 |
|
Fe3+ |
0.065 |
6.0e |
[Ar] 3d5 |
|
Y3+ |
0.102b |
8.0d |
[Kr] 4p0 5s0 |
|
La3+ |
0.125c |
10.3 |
[Xe] 4f0 |
|
(CH3)4N+ |
0.280 |
1.3 |
– |
|
Cl− |
0.181 |
2.0 |
[Ne] 3s2 3p6 |
|
F− |
0.133 |
2.7 |
[He] 2s2 2p6 |
|
CO |
0.178a |
4.0 |
|
|
SO |
0.230 |
3.1 |
|
|
PO |
0.238 |
4.5 |
Figure 4Binding sites of multivalent ions in proteins (see text for details). The image illustrates the pivotal roles of negatively charged amino acid residues in coordinating the respective ions. As opposed to the Y3+ cations bound by BLG (b) and the Ca2+ ions bound by calbindin (c), binding of Fe3+ requires carbonate ions in addition to the protein residues coordinating the ion (seen on the right side of the orange sphere representing Fe3+ in (a)). The structures were visualised using UCSF Chimera164 based on PDB IDs 1SUV, 3PH5 and 6FIE.
Figure 5Phase diagram showing regimes I, II and III, reentrant condensation and LLPS. See text for details.
Figure 6Schematic of DNA‐ion correlations at different ion concentrations. (a): Cation binding to minor and major grooves (inspired by Refs. [347] and [348]). (b) Condensation and charge inversion of DNA molecules induced by ion‐ion‐correlation. The circles on the DNA molecules indicate the net charge of the latter (red: net negative; turquoise: net neutral; green: net positive). Figure was rendered using UCSF chimera164 and Avogadro.349
Figure 7Schematic representation of the arrangement of cations in the bulk solution and near a monolayer of amphiphilic molecules. Image inspired by Ref. [387].