| Literature DB >> 32375287 |
Asan Agibetov1, Benjamin Seirer2, Theresa-Marie Dachs2, Matthias Koschutnik2, Daniel Dalos2, René Rettl2, Franz Duca2, Lore Schrutka2, Hermine Agis3, Renate Kain4, Michela Auer-Grumbach5, Christina Binder2, Julia Mascherbauer2, Christian Hengstenberg2, Matthias Samwald1, Georg Dorffner1, Diana Bonderman2.
Abstract
(1) Background: Cardiac amyloidosis (CA) is a rare and complex condition with poor prognosis. While novel therapies improve outcomes, many affected individuals remain undiagnosed due to a lack of awareness among clinicians. This study was undertaken to develop an expert-independent machine learning (ML) prediction model for CA relying on routinely determined laboratory parameters. (2)Entities:
Keywords: artificial intelligence; cardiac amyloidosis; heart failure; machine learning
Year: 2020 PMID: 32375287 PMCID: PMC7290438 DOI: 10.3390/jcm9051334
Source DB: PubMed Journal: J Clin Med ISSN: 2077-0383 Impact factor: 4.241
Baseline characteristics for the training cohort.
| Amyloidosis-Unrelated HF ( | Amyloidosis-Related HF ( | ||
|---|---|---|---|
|
| |||
| Age, years | 69.0 (58.0, 75.0) | 73.0 (62.0, 78.0) | 0.004 |
| NT-proBNP, pg/mL | 680.0 (226.1, 1621.0) | 3132.5 (1343.8, 6994.2) | < 0.001 |
|
| |||
| Body mass index, kg/m2 | 29.8 (6.6) | 26.0 (4.1) | < 0.001 |
|
| |||
| Gender, males | 167 (40.2) | 87 (71.9) | < 0.001 |
| Coronary artery disease | 112 (27.7) | 23 (19.5) | 0.114 |
| Atrial fibrillation | 173 (42.6) | 47 (39.5) | 0.679 |
| Arterial hypertension | 346 (83.8) | 67 (57.3) | < 0.001 |
| Diabetes mellitus | 118 (28.6) | 11 (9.2) | < 0.001 |
| Hyperlipidemia | 220 (54.3) | 26 (22.4) | < 0.001 |
| MRA | 104 (26.3) | 51 (45.1) | 0.001 |
| Calcium channel blocker | 93 (23.1) | 9 (7.7) | 0.001 |
| Beta-blocker | 278 (68.6) | 58 (52.7) | 0.004 |
| Diuretics | 213 (53.8) | 80 (70.2) | 0.004 |
| ACEI/ARB | 253 (62.5) | 49 (43.8) | 0.001 |
| Oral anticoagulant | 184 (45.7) | 54 (47.0) | 0.888 |
| Statin | 181 (44.6) | 29 (25.0) | 0.001 |
NT-proBNP, N-terminal prohormone of brain natriuretic peptide; MRA, mineralocorticoid receptor antagonist; ACEI/ARB, angiotensin-converting enzyme inhibitors/angiotensin receptor blocker.
Baseline characteristics for the prospective validation cohort.
| Amyloidosis-Unrelated HF ( | Amyloidosis-Related HF ( | ||
|---|---|---|---|
|
| |||
| Age, years | 75.0 (69.0,78.0) | 78.0 (71.8,83.0) | 0.066 |
| NT-proBNP, pg/mL | 851.0 (372.1,1939.0) | 2568.5 (1543.8,4334.0) | <.001 |
|
| |||
| Body mass index, kg/m2 | 29.5 (5.5) | 26.0 (4.5) | 0.003 |
|
| |||
| Gender, males | 36 (29.5) | 28 (77.8) | <0.001 |
| Coronary artery disease | 33 (26.8) | 16 (44.4) | 0.222 |
| Atrial fibrillation | 69 (58.0) | 18 (50.0) | 0.638 |
| Arterial hypertension | 110 (93.2) | 25 (69.4) | 0.003 |
| Diabetes mellitus | 36 (30.8) | 8 (22.2) | 0.638 |
| Hyperlipidemia | 63 (52.9) | 16 (44.4) | 0.638 |
| MRA | 60 (50.4) | 19 (52.8) | 0.954 |
| Calcium channel blocker | 26 (21.7) | 4 (11.1) | 0.534 |
| Beta-blocker | 85 (70.8) | 18 (50.0) | 0.127 |
| Diuretics | 80 (67.8) | 28 (77.8) | 0.634 |
| ACEI/ARB | 88 (73.3) | 23 (63.9) | 0.634 |
| Oral anticoagulant | 75 (61.0) | 19 (52.8) | 0.638 |
| Statin | 59 (50.0) | 16 (44.4) | 0.804 |
NT-proBNP, N-terminal prohormone of brain natriuretic peptide; MRA, mineralocorticoid receptor antagonist; ACEI/ARB, angiotensin-converting enzyme inhibitors/angiotensin receptor blocker.
Figure 1Ratio of missing values per parameter. The truncated set of parameters does not include parameters with a missing ratio >= 0.6 and does not include a highly collinear “Inorganic phosphate” parameter.
Figure 2Relative importance of parameters from the truncated set, measured by the XGBoost algorithm. Means and standard deviations computed from a 10-fold cross-validation are displayed in this graph.
Figure 3Coefficients of a logistic regression model for the outcome prediction. This model uses 12 parameters, which were identified by the XGBoost algorithm.
Diagnostic performance of prediction models.
| Model | ROC AUC | Sensitivity % | Specificity % | PPV % | NPV (FOR) % |
|---|---|---|---|---|---|
| LR-L1 | 0.58 | 67.6 | 53.2 | 30.0 | 84.6 (15.4) |
| LR-XGBoost | 0.75 | 84.6 | 71.7 | 33.3 |
|
| XGBoost-62 |
|
|
|
| 96.1 (3.9) |
| XGBoost-46 | 0.66 | 67.6 | 70.2 | 40.3 | 87.9 (12.1) |
LR-L1—logistic regression with lasso, LR-XGBoost—logistic regression on most important variables identified by XGBoost. XGBoost-62 and XGBoost-46—XGBoost algorithm trained on 62 and 46 parameters, respectively. ROC AUC—area under receiver operating curve, PPV—positive prediction value, NPV—negative prediction value, FOR—false omission rate. Bold indicates best results.