Literature DB >> 32363395

Deep learning for biological age estimation.

Syed Ashiqur Rahman1, Peter Giacobbi2, Lee Pyles3, Charles Mullett3, Gianfranco Doretto1, Donald A Adjeroh1.   

Abstract

Modern machine learning techniques (such as deep learning) offer immense opportunities in the field of human biological aging research. Aging is a complex process, experienced by all living organisms. While traditional machine learning and data mining approaches are still popular in aging research, they typically need feature engineering or feature extraction for robust performance. Explicit feature engineering represents a major challenge, as it requires significant domain knowledge. The latest advances in deep learning provide a paradigm shift in eliciting meaningful knowledge from complex data without performing explicit feature engineering. In this article, we review the recent literature on applying deep learning in biological age estimation. We consider the current data modalities that have been used to study aging and the deep learning architectures that have been applied. We identify four broad classes of measures to quantify the performance of algorithms for biological age estimation and based on these evaluate the current approaches. The paper concludes with a brief discussion on possible future directions in biological aging research using deep learning. This study has significant potentials for improving our understanding of the health status of individuals, for instance, based on their physical activities, blood samples and body shapes. Thus, the results of the study could have implications in different health care settings, from palliative care to public health.
© The Author(s) 2020. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Entities:  

Keywords:  anthropometry; artificial intelligence; bioinformatics; biological age; biomarkers; deep learning; electronic health records; health indices; locomotor activity

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Substances:

Year:  2021        PMID: 32363395      PMCID: PMC8179516          DOI: 10.1093/bib/bbaa021

Source DB:  PubMed          Journal:  Brief Bioinform        ISSN: 1467-5463            Impact factor:   11.622


  39 in total

1.  Biological age--what is it and can it be measured?

Authors:  Stephen H D Jackson; Martin R Weale; Robert A Weale
Journal:  Arch Gerontol Geriatr       Date:  2003 Mar-Apr       Impact factor: 3.250

2.  A new approach to the concept and computation of biological age.

Authors:  Petr Klemera; Stanislav Doubal
Journal:  Mech Ageing Dev       Date:  2005-11-28       Impact factor: 5.432

3.  Time-to-event analysis of longitudinal follow-up of a survey: choice of the time-scale.

Authors:  E L Korn; B I Graubard; D Midthune
Journal:  Am J Epidemiol       Date:  1997-01-01       Impact factor: 4.897

4.  Demographic Estimation from Face Images: Human vs. Machine Performance.

Authors:  Hu Han; Charles Otto; Xiaoming Liu; Anil K Jain
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2015-06       Impact factor: 6.226

5.  Quantification of biological aging in young adults.

Authors:  Daniel W Belsky; Avshalom Caspi; Renate Houts; Harvey J Cohen; David L Corcoran; Andrea Danese; HonaLee Harrington; Salomon Israel; Morgan E Levine; Jonathan D Schaefer; Karen Sugden; Ben Williams; Anatoli I Yashin; Richie Poulton; Terrie E Moffitt
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-06       Impact factor: 11.205

6.  Predicting age by mining electronic medical records with deep learning characterizes differences between chronological and physiological age.

Authors:  Zichen Wang; Li Li; Benjamin S Glicksberg; Ariel Israel; Joel T Dudley; Avi Ma'ayan
Journal:  J Biomed Inform       Date:  2017-11-04       Impact factor: 6.317

Review 7.  Deep Learning for Health Informatics.

Authors:  Daniele Ravi; Charence Wong; Fani Deligianni; Melissa Berthelot; Javier Andreu-Perez; Benny Lo; Guang-Zhong Yang
Journal:  IEEE J Biomed Health Inform       Date:  2016-12-29       Impact factor: 5.772

8.  Informativeness of indices of blood pressure, obesity and serum lipids in relation to ischaemic heart disease mortality: the HUNT-II study.

Authors:  Bjørn Mørkedal; Pål R Romundstad; Lars J Vatten
Journal:  Eur J Epidemiol       Date:  2011-04-03       Impact factor: 8.082

9.  Biomarker signatures of aging.

Authors:  Paola Sebastiani; Bharat Thyagarajan; Fangui Sun; Nicole Schupf; Anne B Newman; Monty Montano; Thomas T Perls
Journal:  Aging Cell       Date:  2017-01-06       Impact factor: 9.304

10.  Biomarker profiling by nuclear magnetic resonance spectroscopy for the prediction of all-cause mortality: an observational study of 17,345 persons.

Authors:  Krista Fischer; Johannes Kettunen; Peter Würtz; Toomas Haller; Aki S Havulinna; Antti J Kangas; Pasi Soininen; Tõnu Esko; Mari-Liis Tammesoo; Reedik Mägi; Steven Smit; Aarno Palotie; Samuli Ripatti; Veikko Salomaa; Mika Ala-Korpela; Markus Perola; Andres Metspalu
Journal:  PLoS Med       Date:  2014-02-25       Impact factor: 11.069

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  3 in total

1.  Using blood test parameters to define biological age among older adults: association with morbidity and mortality independent of chronological age validated in two separate birth cohorts.

Authors:  Johanna Drewelies; Gizem Hueluer; Sandra Duezel; Valentin Max Vetter; Graham Pawelec; Elisabeth Steinhagen-Thiessen; Gert G Wagner; Ulman Lindenberger; Christina M Lill; Lars Bertram; Denis Gerstorf; Ilja Demuth
Journal:  Geroscience       Date:  2022-09-24       Impact factor: 7.581

2.  A Machine Learning-Based Aging Measure Among Middle-Aged and Older Chinese Adults: The China Health and Retirement Longitudinal Study.

Authors:  Xingqi Cao; Guanglai Yang; Xurui Jin; Liu He; Xueqin Li; Zhoutao Zheng; Zuyun Liu; Chenkai Wu
Journal:  Front Med (Lausanne)       Date:  2021-12-01

3.  A machine learning-based data mining in medical examination data: a biological features-based biological age prediction model.

Authors:  Qing Yang; Sunan Gao; Junfen Lin; Ke Lyu; Zexu Wu; Yuhao Chen; Yinwei Qiu; Yanrong Zhao; Wei Wang; Tianxiang Lin; Huiyun Pan; Ming Chen
Journal:  BMC Bioinformatics       Date:  2022-10-03       Impact factor: 3.307

  3 in total

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