| Literature DB >> 32330124 |
Andre Maia Chagas1,2,3, Jennifer C Molloy3,4, Lucia L Prieto-Godino2,5,6, Tom Baden1,2,6,7.
Abstract
With the current rapid spread of COVID-19, global health systems are increasingly overburdened by the sheer number of people that need diagnosis, isolation and treatment. Shortcomings are evident across the board, from staffing, facilities for rapid and reliable testing to availability of hospital beds and key medical-grade equipment. The scale and breadth of the problem calls for an equally substantive response not only from frontline workers such as medical staff and scientists, but from skilled members of the public who have the time, facilities and knowledge to meaningfully contribute to a consolidated global response. Here, we summarise community-driven approaches based on Free and Open Source scientific and medical Hardware (FOSH) as well as personal protective equipment (PPE) currently being developed and deployed to support the global response for COVID-19 prevention, patient treatment and diagnostics.Entities:
Mesh:
Year: 2020 PMID: 32330124 PMCID: PMC7182255 DOI: 10.1371/journal.pbio.3000730
Source DB: PubMed Journal: PLoS Biol ISSN: 1544-9173 Impact factor: 8.029
Fig 1Examples of DIY masks and visors.
A, One of many designs for a home-made cloth-mask [43], which to date remain generally untested for effectiveness. B, Somewhat more effective cotton T-shirt based mask [25], C, Impermeable mask cover [44]. D, Stop gap surgical mask (3D printed) [45]. E, Laser-cut face-shield [46]. F, Aerosol box [47].
Open source and do-it-yourself personal protective equipment.
Highlighted are masks, face shields and aerosol boxes.
| Project Name | License | Type | Note |
|---|---|---|---|
| N/A | Tied | Peer reviewed open access paper | |
| CC-BY-NC (?) | 3D printed | license from | |
| CC-BY | 3D printed | 3D printed mask that has undergone clinical testing | |
| N/A | 3D printed | Shares more than stl files for 3D printings | |
| N/A | 3D printed | Mask clips to hold textile in place. Only stls are available | |
| N/A | Sewn | Masks made out of bras. | |
| N/A | Sewn | Cloth masks, CDC tutorial | |
| N/A | Sewn | Cloth masks, Georgia Tech tutorials | |
| N/A | Sewn | Cloth mask with 2 layers | |
| N/A | Sewn | Cloth mask | |
| N/A | Sewn | Video tutorial | |
| CC BY 4.0 | Sewn | Multiple designs including a mask protector | |
| CC BY 3.0 | Paper towel | Paper towel mask | |
| CC-BY-NC 4.0 | Filter production | Initiative to produce air filters for masks | |
| CC-BY-NC 4.0 | 3D printed | License limits legal use in several places | |
| Copyright | Test/study | "A scientific consortium for data-driven study | |
| CC-BY-NC-SA 4.0 | Snorkel mask | License limits legal use in several places | |
| CC-BY-SA 4.0 | Laser cut | Shield using only laser cut parts | |
| CC-BY-SA | Laser cut | Shield using only laser cut parts | |
| GNU-GPL 3.0 | 3D printed + sheet | ||
| CC-BY-NC 4.0 | 3D printed + sheet | License limits legal use in several places | |
| N/A | Injection mold | ||
| N/A | Glued | ||
| N/A | Glued | ||
| N/A | Cut-out | ||
| Copyright | Disinfection tests | Copyright is for webpage. N/A about project license | |
| CC-BY-NC 4.0 | License limits legal use in several places. | ||
| CC-BY-NC 4.0 | Based on aerosol box listed above | ||
| Copyright | |||
Fig 2Examples of FOSH ventilators.
A, Arduino based PPM system [31]. B, Pandemic ventilator derivative [84]. C, OxyGEN bag automation system [37], D, Prototype rendering from Open Source Ventilator initiative [85]. E, PPM ventilator based on snorkel mask and 3D printed adaptor [86].
Open source ventilators and positive pressure masks.
| Project Name | License | Type | Note |
|---|---|---|---|
| Ventilators | |||
| CERN-OHL v2.0 | Ventilator | Documentation to be released | |
| GNU-GPL 3.0 | Ventilator | Advanced testing stage, updates regularly: | |
| CERN-OHL v2.0 | Ventilator | Brazilian project, most documentation in Portuguese | |
| CERN-OHL v2.0 | Ventilator | Brazilian project, fork of "Inspire" above | |
| MIT / CC-BY-NC 4.0 | Ventilator | Repository is licensed with MIT, but design files are CC-BY-NC 4.0 | |
| Permissive coypright (?) | Ventilator | Started as part of the WirvsVirus hackathon | |
| GNU GPL 3.0 | Ventilator | Project in French | |
| Not released yet | Ventilator | From MIT. No designs have yet been published. | |
| N/A | Ventilator | ||
| GNU-GPL 3.0 | Ventilator | ||
| GNU-GPL 3.0 | Ventilator | Canadian project working with Irish Open Source Ventilator above | |
| N/A | Ventilator | ||
| N/A | Ventilator | One of oldest projects, before "reactivation" posts date back to 2011 | |
| N/A | Ventilator | Pandemic ventilator spin off | |
| N/A | Ventilator | Pandemic ventilator spin off, based in Argentina | |
| N/A | Ventilator | Spanish project with two versions: one for makers, one for industry | |
| N/A | Ventilator | Project to document ventilators designs | |
| MIT | Ventilator | Brazilian project developing a universal firmware for ventilators | |
| Custom license | Ventilator | License only allows use while WHO PHEIC is in place or Oct 2024 | |
| N/A | Ventilator | No designs available yet. Ventilator in testing phase in the UK. | |
| N/A | Ventilator | Documentation to be released | |
| MIT | PPM Ventilator | ||
| N/A | PPM Ventilator | ||
| Custom license | PPM Ventilator | Requires signature of license form | |
| N/A | PPM Ventilator | Positive pressure mask (PPM) | |
| CC | Ventilator repair guide | ||
Fig 3Examples of FOSH designs with potential use in diagnostics.
A, OpenTrons [28], a liquid handling robot B, Miriam, an incubator and reader for isothermal amplifications e.g. LAMP [117]. C, US CDC Primer and Probe Kit for diagnostic tests [118].
Diagnostic hardware and reagents with open source alternatives.
We have selected FDA/CDC-approved items as an illustration but each country will have its own regulators and agencies with different sets of approved equipment and reagents. Many countries are choosing to simplify or accelerate regulatory approval during the COVID-19 pandemic.
| Item | Selected examples of current CDC/FDA-approved items | Status of Open Source alternatives |
|---|---|---|
| RNA Extraction Kit | Qiagen QIAamp® Viral RNA Mini Kit | There are numerous published protocols to extract viral RNA from swabs using standard laboratory reagents, for example: |
| qRT-PCR Mix | Thermo Fisher Scientific® TaqPath 1-Step RT-qPCR Master Mix | Consists of multiple components: |
| Primers | CDC Primer Set and others approved under FDA Emergency Use Authorization [ | Several primer designs have been published as open data and can be synthesised commercially by any company but for diagnostic use the company and reagent batches should be validated and approved by the relevant local regulatory body or used in a regulated lab. |
| Positive Control RNA/DNA | Positive controls are distributed with CDC kits by the International Reagent Resource [ | SARS-COV-2 genome and control sequences are open data and can be synthesised commercially by any company but must be approved for diagnostic use. Control reagents are available from [ |
| Automated RNA Extraction Platform | Qiagen EZ1 Advanced XL | OpenTrons [ |
| qPCR Thermocycler | Applied Biosystems 7500 Fast Dx Real-Time PCR System with SDS version 1.4 software | Open qPCR [ |
| Centrifuges | Refrigerated high-speed centrifuge | No open designs yet with suitable specifications. Existing centrifuge designs [ |
| Heat block/Water bath | Heat block/Water bath with 30 | No open heat block designs yet, water baths have been described using microcontrollers and immersion heaters but the simplest available solution is use of a sous vide cooking device [ |
| Pipettes | Adjustable micropipettes that meet ISO 8655 Standard in the range 0.5 μl to 1,000 μl | A 3D-printed open source design is available for an adjustable micropipette that meets the ISO 8655 Standard down to 30 μl [ |