Literature DB >> 32330041

Excited-State Vibronic Dynamics of Bacteriorhodopsin from Two-Dimensional Electronic Photon Echo Spectroscopy and Multiconfigurational Quantum Chemistry.

Samer Gozem1, Philip J M Johnson2,3, Alexei Halpin2,3, Hoi Ling Luk1, Takefumi Morizumi4, Valentyn I Prokhorenko5, Oliver P Ernst4,6, Massimo Olivucci1,7, R J Dwayne Miller2,3.   

Abstract

Owing to the ultrafast time scale of the photoinduced reaction and high degree of spectral overlap among the reactant, product, and excited electronic states in bacteriorhodopsin (bR), it has been a challenge for traditional spectroscopies to resolve the interplay between vibrational dynamics and electronic processes occurring in the retinal chromophore of bR. Here, we employ ultrafast two-dimensional electronic photon echo spectroscopy to follow the early excited-state dynamics of bR preceding the isomerization. We detect an early periodic photoinduced absorptive signal that, employing a hybrid multiconfigurational quantum/molecular mechanical model of bR, we attribute to periodic mixing of the first and second electronic excited states (S1 and S2, respectively). This recurrent interaction between S1 and S2, induced by a bond length alternation of the retinal chromohore, supports the hypothesis that the ultrafast photoisomerization in bR is initiated by a process involving coupled nuclear and electronic motion on three different electronic states.

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Year:  2020        PMID: 32330041      PMCID: PMC9198827          DOI: 10.1021/acs.jpclett.0c01063

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.888


  42 in total

1.  Two-dimensional electronic spectroscopy reveals ultrafast energy diffusion in chlorosomes.

Authors:  Jakub Dostál; Tomáš Mančal; Ramūnas Augulis; František Vácha; Jakub Pšenčík; Donatas Zigmantas
Journal:  J Am Chem Soc       Date:  2012-07-02       Impact factor: 15.419

2.  Femtosecond stimulated Raman study of excited-state evolution in bacteriorhodopsin.

Authors:  David W McCamant; Philipp Kukura; Richard A Mathies
Journal:  J Phys Chem B       Date:  2005-05-26       Impact factor: 2.991

3.  Primary conformation change in bacteriorhodopsin on photoexcitation.

Authors:  Atsushi Yabushita; Takayoshi Kobayashi
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

Review 4.  Microbial and animal rhodopsins: structures, functions, and molecular mechanisms.

Authors:  Oliver P Ernst; David T Lodowski; Marcus Elstner; Peter Hegemann; Leonid S Brown; Hideki Kandori
Journal:  Chem Rev       Date:  2013-12-23       Impact factor: 60.622

5.  Coherently wired light-harvesting in photosynthetic marine algae at ambient temperature.

Authors:  Elisabetta Collini; Cathy Y Wong; Krystyna E Wilk; Paul M G Curmi; Paul Brumer; Gregory D Scholes
Journal:  Nature       Date:  2010-02-04       Impact factor: 49.962

6.  Retinal isomerization in bacteriorhodopsin captured by a femtosecond x-ray laser.

Authors:  Przemyslaw Nogly; Tobias Weinert; Daniel James; Sergio Carbajo; Dmitry Ozerov; Antonia Furrer; Dardan Gashi; Veniamin Borin; Petr Skopintsev; Kathrin Jaeger; Karol Nass; Petra Båth; Robert Bosman; Jason Koglin; Matthew Seaberg; Thomas Lane; Demet Kekilli; Steffen Brünle; Tomoyuki Tanaka; Wenting Wu; Christopher Milne; Thomas White; Anton Barty; Uwe Weierstall; Valerie Panneels; Eriko Nango; So Iwata; Mark Hunter; Igor Schapiro; Gebhard Schertler; Richard Neutze; Jörg Standfuss
Journal:  Science       Date:  2018-06-14       Impact factor: 47.728

7.  Multidimensional spectroscopy of photoreactivity.

Authors:  Stefan Ruetzel; Meike Diekmann; Patrick Nuernberger; Christof Walter; Bernd Engels; Tobias Brixner
Journal:  Proc Natl Acad Sci U S A       Date:  2014-03-17       Impact factor: 11.205

8.  Impact of Electronic State Mixing on the Photoisomerization Time Scale of the Retinal Chromophore.

Authors:  Madushanka Manathunga; Xuchun Yang; Yoelvis Orozco-Gonzalez; Massimo Olivucci
Journal:  J Phys Chem Lett       Date:  2017-10-11       Impact factor: 6.475

9.  First-Principles Characterization of the Elusive I Fluorescent State and the Structural Evolution of Retinal Protonated Schiff Base in Bacteriorhodopsin.

Authors:  Jimmy K Yu; Ruibin Liang; Fang Liu; Todd J Martínez
Journal:  J Am Chem Soc       Date:  2019-11-04       Impact factor: 15.419

10.  Computational evidence in favor of a two-state, two-mode model of the retinal chromophore photoisomerization.

Authors:  R González-Luque; M Garavelli; F Bernardi; M Merchán; M A Robb; M Olivucci
Journal:  Proc Natl Acad Sci U S A       Date:  2000-08-15       Impact factor: 11.205

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  2 in total

Review 1.  Coupled- and Independent-Trajectory Approaches Based on the Exact Factorization Using the PyUNIxMD Package.

Authors:  Tae In Kim; Jong-Kwon Ha; Seung Kyu Min
Journal:  Top Curr Chem (Cham)       Date:  2022-01-27

2.  Quantum-classical simulations of rhodopsin reveal excited-state population splitting and its effects on quantum efficiency.

Authors:  Xuchun Yang; Madushanka Manathunga; Samer Gozem; Jérémie Léonard; Tadeusz Andruniów; Massimo Olivucci
Journal:  Nat Chem       Date:  2022-03-03       Impact factor: 24.274

  2 in total

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