Literature DB >> 19481521

FACT and Asf1 regulate nucleosome dynamics and coactivator binding at the HO promoter.

Shinya Takahata1, Yaxin Yu, David J Stillman.   

Abstract

Transcriptional activators and coactivators overcome repression by chromatin, but regulation of chromatin disassembly and coactivator binding to promoters is poorly understood. Activation of the yeast HO gene follows the sequential binding of both sequence-specific DNA-binding proteins and coactivators during the cell cycle. Here, we show that the nucleosome disassembly occurs in waves both along the length of the promoter and during the cell cycle. Different chromatin modifiers are required for chromatin disassembly at different regions of the promoter, with Swi/Snf, the FACT chromatin reorganizer, and the Asf1 histone chaperone each required for nucleosome eviction at distinct promoter regions. FACT and Asf1 both bind to upstream elements of the HO promoter well before the gene is transcribed. The Swi/Snf, SAGA, and Mediator coactivators bind first to the far upstream promoter region and subsequently to a promoter proximal region, and FACT and Asf1 are both required for this coactivator re-recruitment.

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Year:  2009        PMID: 19481521      PMCID: PMC2767235          DOI: 10.1016/j.molcel.2009.04.010

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  77 in total

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3.  Rtt109 acetylates histone H3 lysine 56 and functions in DNA replication.

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4.  Structure of the histone chaperone ASF1 bound to the histone H3 C-terminal helix and functional insights.

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6.  Mutations in the pho2 (bas2) transcription factor that differentially affect activation with its partner proteins bas1, pho4, and swi5.

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Authors:  Marilyn G Pray-Grant; David Schieltz; Stacey J McMahon; Jennifer M Wood; Erin L Kennedy; Richard G Cook; Jerry L Workman; John R Yates; Patrick A Grant
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

8.  SALSA, a variant of yeast SAGA, contains truncated Spt7, which correlates with activated transcription.

Authors:  David E Sterner; Rimma Belotserkovskaya; Shelley L Berger
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-19       Impact factor: 11.205

9.  Yeast Rtt109 promotes genome stability by acetylating histone H3 on lysine 56.

Authors:  Robert Driscoll; Amanda Hudson; Stephen P Jackson
Journal:  Science       Date:  2007-02-02       Impact factor: 47.728

10.  Structure of the yeast histone H3-ASF1 interaction: implications for chaperone mechanism, species-specific interactions, and epigenetics.

Authors:  Andrew J Antczak; Toshiaki Tsubota; Paul D Kaufman; James M Berger
Journal:  BMC Struct Biol       Date:  2006-12-13
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  71 in total

1.  In vivo role for the chromatin-remodeling enzyme SWI/SNF in the removal of promoter nucleosomes by disassembly rather than sliding.

Authors:  Christopher R Brown; Changhui Mao; Elena Falkovskaia; Jason K Law; Hinrich Boeger
Journal:  J Biol Chem       Date:  2011-10-06       Impact factor: 5.157

2.  Excess histone levels mediate cytotoxicity via multiple mechanisms.

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Journal:  Cell Cycle       Date:  2010-10-13       Impact factor: 4.534

3.  A Role for Mediator Core in Limiting Coactivator Recruitment in Saccharomyces cerevisiae.

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Journal:  Genetics       Date:  2014-01       Impact factor: 4.562

5.  Stochastic expression and epigenetic memory at the yeast HO promoter.

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6.  Creating memories of transcription.

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7.  Spatiotemporal cascade of transcription factor binding required for promoter activation.

Authors:  Robert M Yarrington; Jared S Rudd; David J Stillman
Journal:  Mol Cell Biol       Date:  2014-12-15       Impact factor: 4.272

Review 8.  Molecular traffic jams on DNA.

Authors:  Ilya J Finkelstein; Eric C Greene
Journal:  Annu Rev Biophys       Date:  2013-02-28       Impact factor: 12.981

9.  Tousled kinase TLK1B mediates chromatin assembly in conjunction with Asf1 regardless of its kinase activity.

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10.  Phosphorylation-mediated control of histone chaperone ASF1 levels by Tousled-like kinases.

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Journal:  PLoS One       Date:  2009-12-16       Impact factor: 3.240

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