Literature DB >> 32315755

Targeting cancer epigenetics with CRISPR-dCAS9: Principles and prospects.

Mohammad Mijanur Rahman1, Trygve O Tollefsbol2.   

Abstract

Cancer therapeutics is an ever-evolving field due to incessant demands for effective and precise treatment options. Over the last few decades, cancer treatment strategies have shifted somewhat from surgery to targeted precision medicine. CRISPR-dCas9 is an emerging version of precision cancer therapy that has been adapted from the prokaryotic CRISPR-Cas system. Once ligated to epigenetic effectors (EE), CRISPR-dCas9 can function as an epigenetic editing tool and CRISPR-dCas9-EE complexes could be exploited to alter cancerous epigenetic features associated with different cancer hallmarks. In this article, we discuss the rationale of epigenetic editing as a therapeutic strategy against cancer. We also outline how sgRNA-dCas9 was derived from the CRISPR-Cas system. In addition, the current status of sgRNA-dCas9 use (in vivo and in vitro) in cancer is updated with a molecular illustration of CRISPR-dCas9-mediated epigenetic and transcriptional modulation. As sgRNA-dCas9 is still at the developmental phase, challenges are inherent to its use. We evaluate major challenges in targeting cancer with sgRNA-dCas9 such as off-target effects, lack of sgRNA designing rubrics, target site selection dilemmas and deficient sgRNA-dCas9 delivery systems. Finally, we appraise the sgRNA-dCas9 as a prospective cancer therapeutic by summarizing ongoing improvements of sgRNA-dCas9 methodology.
Copyright © 2020 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CRISPR-dCas9; Cancer epigenetics; Epigenetic editing; Off-target effect; sgRNA designing

Mesh:

Substances:

Year:  2020        PMID: 32315755      PMCID: PMC7572534          DOI: 10.1016/j.ymeth.2020.04.006

Source DB:  PubMed          Journal:  Methods        ISSN: 1046-2023            Impact factor:   3.608


  147 in total

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Review 2.  Structure and functions of powerful transactivators: VP16, MyoD and FoxA.

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3.  Pan-Cancer Landscape of Aberrant DNA Methylation across Human Tumors.

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4.  Sequence determinants of improved CRISPR sgRNA design.

Authors:  Han Xu; Tengfei Xiao; Chen-Hao Chen; Wei Li; Clifford A Meyer; Qiu Wu; Di Wu; Le Cong; Feng Zhang; Jun S Liu; Myles Brown; X Shirley Liu
Journal:  Genome Res       Date:  2015-06-10       Impact factor: 9.043

5.  Epigenetic evolution and lineage histories of chronic lymphocytic leukaemia.

Authors:  Federico Gaiti; Ronan Chaligne; Hongcang Gu; Ryan M Brand; Steven Kothen-Hill; Rafael C Schulman; Kirill Grigorev; Davide Risso; Kyu-Tae Kim; Alessandro Pastore; Kevin Y Huang; Alicia Alonso; Caroline Sheridan; Nathaniel D Omans; Evan Biederstedt; Kendell Clement; Lili Wang; Joshua A Felsenfeld; Erica B Bhavsar; Martin J Aryee; John N Allan; Richard Furman; Andreas Gnirke; Catherine J Wu; Alexander Meissner; Dan A Landau
Journal:  Nature       Date:  2019-05-15       Impact factor: 49.962

6.  Antibody-targeted chromatin enables effective intracellular delivery and functionality of CRISPR/Cas9 expression plasmids.

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Journal:  Nucleic Acids Res       Date:  2019-06-04       Impact factor: 16.971

Review 7.  MicroRNAs and Epigenetics Strategies to Reverse Breast Cancer.

Authors:  Mohammad Mijanur Rahman; Andrew C Brane; Trygve O Tollefsbol
Journal:  Cells       Date:  2019-10-08       Impact factor: 6.600

8.  CRISPR RNA-guided activation of endogenous human genes.

Authors:  Morgan L Maeder; Samantha J Linder; Vincent M Cascio; Yanfang Fu; Quan H Ho; J Keith Joung
Journal:  Nat Methods       Date:  2013-07-25       Impact factor: 28.547

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Authors:  Frank Hille; Emmanuelle Charpentier
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-11-05       Impact factor: 6.237

10.  Ezh2-dCas9 and KRAB-dCas9 enable engineering of epigenetic memory in a context-dependent manner.

Authors:  Henriette O'Geen; Sofie L Bates; Sakereh S Carter; Karly A Nisson; Julian Halmai; Kyle D Fink; Suhn K Rhie; Peggy J Farnham; David J Segal
Journal:  Epigenetics Chromatin       Date:  2019-05-03       Impact factor: 4.954

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Journal:  Cancers (Basel)       Date:  2022-06-10       Impact factor: 6.575

2.  Genome editing in cancer: Challenges and potential opportunities.

Authors:  Dor Breier; Dan Peer
Journal:  Bioact Mater       Date:  2022-09-14

Review 3.  Epigenetic Editing in Prostate Cancer: Challenges and Opportunities.

Authors:  Mariana Brütt Pacheco; Vânia Camilo; Rui Henrique; Carmen Jerónimo
Journal:  Epigenetics       Date:  2021-06-15       Impact factor: 4.861

Review 4.  Can Forest Trees Cope with Climate Change?-Effects of DNA Methylation on Gene Expression and Adaptation to Environmental Change.

Authors:  Ewelina A Klupczyńska; Ewelina Ratajczak
Journal:  Int J Mol Sci       Date:  2021-12-16       Impact factor: 5.923

  4 in total

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