Literature DB >> 32292220

Analysis of circulating non-coding RNAs in a non-invasive and cost-effective manner.

Yu-Min Wang1,2, Michael Patrick Trinh1, Yongzan Zheng1, Kaizhu Guo1, Luis A Jimenez3, Wenwan Zhong1.   

Abstract

Non-coding RNAs (ncRNAs) participate in regulation of gene expression, and are highly relevant to pathological development. They are found to be stably present in diverse body fluids, including those in the circulatory system, which can be sampled non-invasively for clinical tests. Thus, circulating ncRNAs have great potential to be disease biomarkers. However, tremendous efforts are desired to discover and utilize ncRNAs as biomarkers in clinical diagnosis, calling for technological advancement in analysis of circulating ncRNAs in biospecimens. Hence, this review summarizes the recent developments in this area, highlighting the works devoted to cancer diagnosis and prognosis. Three main directions are focused: 1) Extraction and purification of ncRNAs from body fluids; 2) Quantification of the purified circulating ncRNAs; and 3) Microfluidic platforms for integration of both steps to enable point-of-care diagnostics. These technologies have laid a solid foundation to move forward the applications of circulating ncRNAs in disease diagnosis and cure.

Entities:  

Keywords:  Detection; Disease biomarker; Extraction; Liquid biopsy; Non-coding RNA; Point-of-care diagnostics; Purification; Quantification

Year:  2019        PMID: 32292220      PMCID: PMC7156030          DOI: 10.1016/j.trac.2019.07.001

Source DB:  PubMed          Journal:  Trends Analyt Chem        ISSN: 0165-9936            Impact factor:   12.296


  195 in total

Review 1.  Circulating microRNA in body fluid: a new potential biomarker for cancer diagnosis and prognosis.

Authors:  Nobuyoshi Kosaka; Haruhisa Iguchi; Takahiro Ochiya
Journal:  Cancer Sci       Date:  2010-07-07       Impact factor: 6.716

Review 2.  Materials and microfluidics: enabling the efficient isolation and analysis of circulating tumour cells.

Authors:  Joshua M Jackson; Małgorzata A Witek; Joyce W Kamande; Steven A Soper
Journal:  Chem Soc Rev       Date:  2017-07-17       Impact factor: 54.564

3.  A microarray platform for detecting disease-specific circulating miRNA in human serum.

Authors:  Somenath Roy; Jun Hui Soh; Jackie Y Ying
Journal:  Biosens Bioelectron       Date:  2015-08-19       Impact factor: 10.618

Review 4.  MicroRNAs in vertebrate development.

Authors:  Brian D Harfe
Journal:  Curr Opin Genet Dev       Date:  2005-08       Impact factor: 5.578

Review 5.  Point-of-care testing and the control of infectious diseases.

Authors:  Khayriyyah Mohd Hanafiah; Mary Garcia; David Anderson
Journal:  Biomark Med       Date:  2013-06       Impact factor: 2.851

6.  Rapid molecular detection of extrapulmonary tuberculosis by the automated GeneXpert MTB/RIF system.

Authors:  Doris Hillemann; Sabine Rüsch-Gerdes; Catharina Boehme; Elvira Richter
Journal:  J Clin Microbiol       Date:  2011-01-26       Impact factor: 5.948

Review 7.  Existing and Emerging Technologies for Point-of-Care Testing.

Authors:  Andrew St John; Christopher P Price
Journal:  Clin Biochem Rev       Date:  2014-08

8.  Cobalt oxyhydroxide nanoflake based fluorescence sensing platform for label-free detection of DNA.

Authors:  Yaqing Chang; Zhe Zhang; Huiqing Liu; Nan Wang; Jilin Tang
Journal:  Analyst       Date:  2016-06-02       Impact factor: 4.616

Review 9.  Isothermal nucleic acid amplification technologies for point-of-care diagnostics: a critical review.

Authors:  Pascal Craw; Wamadeva Balachandran
Journal:  Lab Chip       Date:  2012-05-16       Impact factor: 6.799

10.  Circulating miRNAs, isomiRs and small RNA clusters in human plasma and breast milk.

Authors:  Mercedes Rubio; Mariona Bustamante; Carles Hernandez-Ferrer; Dietmar Fernandez-Orth; Lorena Pantano; Yaris Sarria; Maria Piqué-Borras; Kilian Vellve; Silvia Agramunt; Ramon Carreras; Xavier Estivill; Juan R Gonzalez; Alfredo Mayor
Journal:  PLoS One       Date:  2018-03-05       Impact factor: 3.240

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  3 in total

1.  Insight Into the Long Noncoding RNA and mRNA Coexpression Profile in the Human Blood Transcriptome Upon Leishmania infantum Infection.

Authors:  Sandra Regina Maruyama; Carlos Alessandro Fuzo; Antonio Edson R Oliveira; Luana Aparecida Rogerio; Nayore Tamie Takamiya; Gabriela Pessenda; Enaldo Vieira de Melo; Angela Maria da Silva; Amélia Ribeiro Jesus; Vanessa Carregaro; Helder I Nakaya; Roque Pacheco Almeida; João Santana da Silva
Journal:  Front Immunol       Date:  2022-03-15       Impact factor: 7.561

Review 2.  Epigenetic Regulation in Exposome-Induced Tumorigenesis: Emerging Roles of ncRNAs.

Authors:  Miguel Ángel Olmedo-Suárez; Ivonne Ramírez-Díaz; Andrea Pérez-González; Alejandro Molina-Herrera; Miguel Ángel Coral-García; Sagrario Lobato; Pouya Sarvari; Guillermo Barreto; Karla Rubio
Journal:  Biomolecules       Date:  2022-03-28

Review 3.  OncomiRs as noncoding RNAs having functions in cancer: Their role in immune suppression and clinical implications.

Authors:  Khalid Otmani; Redouane Rouas; Philippe Lewalle
Journal:  Front Immunol       Date:  2022-09-16       Impact factor: 8.786

  3 in total

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